Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq2528 214 2e-50
seq2704 98.7 1e-15
>seq2528
Length=594046
Score = 214 bits (236), Expect = 2e-50
Identities = 595/908 (66%), Gaps = 30/908 (3%)
Strand=Plus/Minus
Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052
|| |||||||| || |||||| ||| || || |||| ||||| | ||| | |
Sbjct 61452 TCAAACTCGTCGCCGTAAACATCAGCCAACCCTGGTGCCTCATTGGGACAGAACAAGGTC 61393
Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63112
|| || |||| | || || || |||||||| | ||| || |||| ||||| | |||
Sbjct 61392 CAATCGCCGTTCTTCTCAACCCGCTTCATAAACAAATCTGGGGTCCAGAGAGCAAGAAAG 61333
Query 63113 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA---AGATCGAGGAACGCC 63169
||||| | | ||| |||||| ||||| | |||||| ||||| | || |
Sbjct 61332 AGATCACGAGCTCTCACTTCCTCTTTTCCG---TGGTTTTTACGGAGATCCAAAAATTCG 61276
Query 63170 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCT 63229
| ||||| || ||||| ||||| | || ||||| | | || || ||||| || ||
Sbjct 61275 AAGATATCGGAGTGCCAGGGTTCAAGATAGATGGCGAAGGCACCTGGTCGTTTATTGCCA 61216
Query 63230 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTG 63289
||||| || | || | ||| ||||| || | || | | ||| || || || || ||
Sbjct 61215 CCCTGGTCAACATAGCGAGCAGTGTTGTTGAAGACACGGAGCATGGGGATGATTCCGTTA 61156
Query 63290 GATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATAT----TACTAATTGA 63345
|| | ||||| || |||| || ||| ||| ||||||| ||| ||| ||| |
Sbjct 61155 GAGGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTGGCACGGATACGGTGTAC--ATTAA 61098
Query 63346 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 63405
|||| || || || || | || || || | ||| || ||| | |||||| |||||
Sbjct 61097 --GACCAATACCACCAGCTGTCTTGGAAATCAGTGCACAGGTTTTGAGCGTATCGTAGAT 61040
Query 63406 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 63465
|| || |||||||| ||| |||||| | || |||||| | |||||| | |
Sbjct 61039 ACCTTCGATACTATCCTCCTTCATGTCGATGAGGAAACAGGATGCCATTTGTGGCTGTGG 60980
Query 63466 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATT 63525
||||||||| || || | || |||||||||||||| || |||||| || | | |||
Sbjct 60979 AGTTCCCGCGTTGAAAAGAGTGGGAGAAGCGTGAGTGAAGAATTTTTGGGACATCAAATT 60920
Query 63526 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 63585
||| || ||||| || || || ||| ||||| || || || || ||||| |
Sbjct 60919 GTAAGTTTCAATCGCCTTCTCAATGTCCTCGCCGTGAATACCAACCGCAACCCGCATAAT 60860
Query 63586 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 63645
||||||||| || | || | | |||| || || ||||| || || || |
Sbjct 60859 CATGTGCTGCGGACGCTCGGCAACCTTGCCATTGATCCGCAACAGATAAGACCGCTCTAG 60800
Query 63646 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63705
|| || || |||||||| | ||| ||| || || ||||||| |||| ||||||| ||
Sbjct 60799 TGTCTTGAAGCCAAAATATTGGTAGTTAAAATCACGATCGTAAACAATAGCCGAGTTAAG 60740
Query 63706 TTTATCCTTATATTTGTTAACTACATCCATGGTAATACTT----GAAATAATAGGAAAAT 63761
| || | || |||| | || |||| || || || ||||| |
Sbjct 60739 CTCGTCAGCGTGCTTCATAACAATTTC----GTAAGTTTTTTGAGAGATCATAGG----T 60688
Query 63762 GTTTCCC----ATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAAT 63817
| | | || || || ||||| || | | | ||| || || || | |||
Sbjct 60687 GCTGGGCGGTTGTTCTTTGGGTTGACGTAATGATAGAGATCGTCAATGACCGAAGAGAAT 60628
Query 63818 AGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAA 63877
||||||| || | || || || || |||||||||||||| ||||| || || |||||
Sbjct 60627 TGTTTTTTCGTCTGCTTATGCAGGTTGGATACGGCTATTCTGGCGGCAAGGATTGCATAG 60568
Query 63878 TCCGGATG 63885
|| |||||
Sbjct 60567 TCTGGATG 60560
Score = 98.7 bits (108), Expect = 1e-15
Identities = 684/1095 (62%), Gaps = 23/1095 (2%)
Strand=Plus/Minus
Query 61850 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 61909
||||||||||| ||||| || || | | || || || |||||||| || ||||| ||
Sbjct 62656 GTGAATTGAATTGGAGCAGACGCTGCCATGGTTCGGAGGTAGTACATCCCGGTTTTCAGG 62597
Query 61910 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 61969
|| || |||||||| ||| ||||| || || | |||| | || || |
Sbjct 62596 CCCAGCTTCCATCCGGCAAAGTGCATGCTGGTGATTTTGCCCATGGTGGGCTCCTTCAAG 62537
Query 61970 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATA 62029
|||||||||| |||||| || |||||||| || || | || |||||||| | | |
Sbjct 62536 TGGATATTCAGAGATTGGGACTGGTCGATGAATGCACCACGATCGGCAGCCATCTGAACA 62477
Query 62030 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62089
|| || | || | |||||||| | || ||||| | | |||||||| | || |
Sbjct 62476 ATGGTTCTCTGAGAGATTTCCCACACCGTCTTATAGAGTGCTTTAATATCCGCAGGGATA 62417
Query 62090 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62146
|| | | ||||| || || || || || || || || | ||||| || | || |
Sbjct 62416 TTGGGGATGTTCTGGATCGAACCGCCTTCAGCAATGATACGGTTCTTCATATTGTCCGAC 62357
Query 62147 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 62206
|| | ||| | | || | || || || ||||| ||||| || || ||
Sbjct 62356 CACAGACCGAGATCGACGAGATCTTTCAGAAGCCATGGGTTAACGACTTGGAACTCGCCT 62297
Query 62207 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 62266
| | || | |||| || || || || || || || | | | || || |||
Sbjct 62296 GCAAGAACCCGTCGAGAATAGATGTTTGATGTGTATGGCTCAAAACATTCGTTGAATCCG 62237
Query 62267 AAAATTTGAGCAGTTGAT-GCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 62325
| || ||| | | || | ||||| ||||||||||| || | | ||| || | | |||
Sbjct 62236 AGGATCTGA-CTGGTGCTAGCAGTTGGCATAGGTGCAACGAGCAGACTGTTGCGTACACC 62178
Query 62326 GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNN 62385
| | | ||| | | ||| || | ||||||| |||||| || | || ||
Sbjct 62177 ATGTTTGGCGATGTCCTTTTTCAGCGCGTCCCAATCCCAAAGGTCAGTTGGCGTCACGTT 62118
Query 62386 NNNNNNNNNNNNTTGTAGAATACC----GTTACTGGCGTACGATCCTACATATGTATCGT 62441
|| | | |||| | ||| || || ||| | || || || |
Sbjct 62117 CCACATATCATACTGCAAAGTACCCTGAGATACAGG----AGAGCCTTCGTAGGTCTCAT 62062
Query 62442 ATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTT 62501
| || || || | || | || ||| ||| || || | | |||||| ||||
Sbjct 62061 AGGGCCCGTCAACTTTGGCGATATCGCAAGACGCGGTCAAAGCCGCATGATAAATTGTTT 62002
Query 62502 CGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAG-A 62560
| ||||||| |||| | | | || || | ||||||||| ||| || | |
Sbjct 62001 CAAAGATCTGAATATTCAACTGCTTAGCCTCGGGCGAATCAAATGG-CAATCGGAGCGCA 61943
Query 62561 ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAG 62620
| || || || || | ||||| || |||| ||||||| | ||| | ||||
Sbjct 61942 AGGAAAGCATCGGCAAGACCTTGGACGCCAACCGCGATAGGCCGATGACGGAAATTACTC 61883
Query 62621 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACA 62680
| ||||| || | |||||| | || |||| |||||||| || ||||| | ||||
Sbjct 61882 TTGCGGGCTTCAGGGACAGGATAGTGGTTGTTATCAATAATTTTGTTCAGATTGCGGACA 61823
Query 62681 ATTACTTTGACCACATCCTTCAGTTTGAGAAAATCA-AATCGCC-CATCTATTACAAAC- 62737
| |||| || || | || |||| ||| ||| | ||||| | | | |||
Sbjct 61822 AGAACTTGAGTAACTTCATGCAATTTGCCAAAGTCATACTCGCCACGAACAGGATCAACG 61763
Query 62738 -ATGT--TCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATAT 62794
|||| ||| |||| |||||||| || ||||| || || |||| | | | ||
Sbjct 61762 TATGTGGGCAAGGCAAGCGATGCCAGGTTGCAAACTGCAACTTCATCTGGGGCGGTGTAC 61703
Query 62795 TGTATTATCTCAGTGCAAAGATTACTACACTTG-ATGGTTCCTAAATTTTGTTGATTACT 62853
| || || || ||||| || || | | | | || ||||| | |||| || || ||
Sbjct 61702 TCGATGATTTCCGTGCAGAGGTT-CGAGCTTCGAATAGTTCCAAGGTTTTTCTGGTTGCT 61644
Query 62854 CTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTC 62913
||| ||| ||||||||||| ||||| ||||| || |||| || || |||||| |||
Sbjct 61643 CTTGCGGTTGCACGCATCCTTGTAAAGCATGAACGGGTTACCCGTCTCCGTCTGAGCTTC 61584
Query 62914 TATAATCGCTTTCCA 62928
|| || || | |||
Sbjct 61583 TAGGATGGCATACCA 61569
>seq2704
Length=633058
Score = 98.7 bits (108), Expect = 1e-15
Identities = 298/455 (65%), Gaps = 4/455 (1%)
Strand=Plus/Plus
Query 32357 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 32416
|||||| || || ||||| || || || || || || || || || || |||||
Sbjct 56137 CATAACACCAGCCTTCTGGTAGTCGCCGACGCGCTTCTCAAAGAAGTTTGTCTTACCGGA 56196
Query 32417 TAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCC 32476
| || || || |||||||| |||||||| || || ||||||| || ||| | |
Sbjct 56197 CAGCGAAATGTTGTCCATGAAGTCGAATGGGTTCGTCGCATTATAGTACTTCTTAT-TAC 56255
Query 32477 CAATTCAGA-AATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAAT 32535
||| || || ||| || || |||||||| || || ||| ||| | || | |
Sbjct 56256 CAAGAGCGACAAGCAACCTGTCGGCGACAAACTCGATGTATTGGCACATGAGTTTGGAGT 56315
Query 32536 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 32595
|||| || | ||| ||||| || | || | ||||||| ||| || ||| |
Sbjct 56316 TCATGCCGAGAAGGGCGCAAGGAAGGGCATCGGTCAAGAATTCTTTTTCGATCTCGACAG 56375
Query 32596 CGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGAT-ACAATAAATGTTTAAAC 32654
| ||||| |||| || || | | ||||| | | || | | || ||
Sbjct 56376 CTTCTGTGATAACAGCCTCGACGGCCTGGGGGCTCGGGCGGTGACGA-AGGTGAGAGAAG 56434
Query 32655 ATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAAC 32714
| | ||| || || || ||| || |||||||| | ||| | ||| ||||| ||
Sbjct 56435 AGAAGACAGGCAAAGTCAGTGTGGAGGCCCTCGTCGCGGGAAATCAGTTCATTGGAGAAG 56494
Query 32715 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAA 32774
||||| || ||||| ||||||||||| || ||||| || || || ||||| || |||
Sbjct 56495 GTGAGGCCAGGCATAAGGCCACGCTTCTTCAGCCAGAAGATAGAGGCAAAAGAGCCACTG 56554
Query 32775 AAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAG 32809
|| || || || || || || |||||||||| |||
Sbjct 56555 AAAAAGATACCCTCAACGGCTGCAAAGGCAACAAG 56589
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633610424830400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |