Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq934 104 2e-17
seq1640 91.5 1e-13
>seq934
Length=187681
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||||||||| ||||| |||||||| || | || || | || || || || ||
Sbjct 10042 ATGCAAATATTTGTGAAGACATTGACCGGCAAGACTATTACGTTAGAGGTCGAATCCTCA 10101
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| ||||| ||||| ||||||| || || || || || ||||| ||||||
Sbjct 10102 GACACAATCGACAACGTGAAGACAAAAATCCAAGATAAGGAGGGTATCCCACCAGACCAA 10161
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
|| || | |||||||| || || ||| | ||||||| ||||| | ||| || ||
Sbjct 10162 CAACGTCTCATTTTTGCTGGTAAGCAACTTGAAGATGGCCGCACGCTTTCCGACTATAAC 10221
Query 25179 ATTCAAAAAGAA 25190
|| || || |||
Sbjct 10222 ATCCAGAAGGAA 10233
Score = 93.3 bits (102), Expect = 4e-14
Identities = 144/203 (71%), Gaps = 2/203 (1%)
Strand=Plus/Plus
Query 25000 TGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTG 25059
|| ||||| |||| |||||| | ||||| || ||||||| | ||||||||||| || |
Sbjct 9587 TGAAAATAGTTGTCAAGACTCTTACCGGAAAGACCATCACTCTTGAAGTGGAGTCTTCGG 9646
Query 25060 ACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
| || ||||| | || |||| || ||| ||||| ||||| || || || || ||
Sbjct 9647 ATACCATCGA-TAACGTGAAAACCAAGATCCAAGACAAGGAAGGCATCCCTCCGGATCAG 9705
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | || || ||||| || || | || || | || ||| | ||||| ||
Sbjct 9706 CAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGGACTCTCTCTGATTATAAC 9765
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
||||| || |||||||| || ||
Sbjct 9766 ATTCAGAAGGAATCCACCCTCCA 9788
>seq1640
Length=153026
Score = 91.5 bits (100), Expect = 1e-13
Identities = 130/181 (72%), Gaps = 4/181 (2%)
Strand=Plus/Minus
Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067
|| || ||||| | ||||| || | ||||| |||| ||||||||| ||||| |||
Sbjct 9862 TTCGTCAAGACCCTCACCGGCAAGACTATCACCCTCGAGGTGGAGTCGAGCGACACAATC 9803
Query 25068 GAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGA 25125
|| || || ||| || || ||||| ||||| || || |||||||| |||||
Sbjct 9802 GA--CAATGTCAAGAGCAAGATTCAGGACAAGGAAGGCATCCCTCCTGACCAGCAGCGTT 9745
Query 25126 TTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAA 25185
| ||||||||||| || || | || || | ||||| || ||||||| |||||||| |
Sbjct 9744 TGATTTTTGCCGGAAAGCAGCTCGAGGACGGACGCACCTTGAGCGATTATAATATTCAGA 9685
Query 25186 A 25186
|
Sbjct 9684 A 9684
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433313614052060
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |