Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq934 104 2e-17 seq1640 91.5 1e-13 >seq934 Length=187681 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||||||||| ||||| |||||||| || | || || | || || || || || Sbjct 10042 ATGCAAATATTTGTGAAGACATTGACCGGCAAGACTATTACGTTAGAGGTCGAATCCTCA 10101 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| ||||| ||||||| || || || || || ||||| |||||| Sbjct 10102 GACACAATCGACAACGTGAAGACAAAAATCCAAGATAAGGAGGGTATCCCACCAGACCAA 10161 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | |||||||| || || ||| | ||||||| ||||| | ||| || || Sbjct 10162 CAACGTCTCATTTTTGCTGGTAAGCAACTTGAAGATGGCCGCACGCTTTCCGACTATAAC 10221 Query 25179 ATTCAAAAAGAA 25190 || || || ||| Sbjct 10222 ATCCAGAAGGAA 10233 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/203 (71%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 25000 TGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTG 25059 || ||||| |||| |||||| | ||||| || ||||||| | ||||||||||| || | Sbjct 9587 TGAAAATAGTTGTCAAGACTCTTACCGGAAAGACCATCACTCTTGAAGTGGAGTCTTCGG 9646 Query 25060 ACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 | || ||||| | || |||| || ||| ||||| ||||| || || || || || Sbjct 9647 ATACCATCGA-TAACGTGAAAACCAAGATCCAAGACAAGGAAGGCATCCCTCCGGATCAG 9705 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || ||||| || || | || || | || ||| | ||||| || Sbjct 9706 CAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGGACTCTCTCTGATTATAAC 9765 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 ||||| || |||||||| || || Sbjct 9766 ATTCAGAAGGAATCCACCCTCCA 9788 >seq1640 Length=153026 Score = 91.5 bits (100), Expect = 1e-13 Identities = 130/181 (72%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || ||||| | ||||| || | ||||| |||| ||||||||| ||||| ||| Sbjct 9862 TTCGTCAAGACCCTCACCGGCAAGACTATCACCCTCGAGGTGGAGTCGAGCGACACAATC 9803 Query 25068 GAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGA 25125 || || || ||| || || ||||| ||||| || || |||||||| ||||| Sbjct 9802 GA--CAATGTCAAGAGCAAGATTCAGGACAAGGAAGGCATCCCTCCTGACCAGCAGCGTT 9745 Query 25126 TTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAA 25185 | ||||||||||| || || | || || | ||||| || ||||||| |||||||| | Sbjct 9744 TGATTTTTGCCGGAAAGCAGCTCGAGGACGGACGCACCTTGAGCGATTATAATATTCAGA 9685 Query 25186 A 25186 | Sbjct 9684 A 9684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433313614052060