Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq2704 96.9 4e-15 >seq2704 Length=633058 Score = 96.9 bits (106), Expect = 4e-15 Identities = 342/524 (65%), Gaps = 24/524 (5%) Strand=Plus/Plus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 |||||||||| || ||||| || || || || |||||||| |||||||| || Sbjct 56137 CATAACACCAGCCTTCTGGTAGTCGCCGACGCGCTTCTCAAAGAAGTTTGTCTTACCGGA 56196 Query 92850 CAAAGATATCGAATTCACTA-GT-GATTGGATTCTTGGCGTTATAATACTTTTCACCGAT 92907 || || || | || | || || ||| ||| | || ||||| ||||| | | | Sbjct 56197 CAGCGAAATGTTGTCCATGAAGTCGAATGGGTTCGTCGCATTATAGTACTTCTTATT-AC 56255 Query 92908 CAACTCGTACAAT-AATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAAT 92966 ||| |||| || || || || ||||| || ||||| || |||| | | | | Sbjct 56256 CAAGAGCGACAAGCAACCTGTCGGCGACAAACTCGATGTATTGGCACATGAGTTTGGAGT 56315 Query 92967 TCATTCCTAGAAGA-CGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACG 93025 |||| || ||||| || | ||| || || ||||||||||| ||||| ||||| | || Sbjct 56316 TCATGCCGAGAAGGGCGCA-AGGAAGGGCATCGGTCAAGAATTCTTTTTCGATCTCGACA 56374 Query 93026 GCTTCTTTCAAGATTTCTATTACTCTACTATTTGGTGGTTTTTGT----ACGACA-TAAT 93080 |||||| | | | | ||| || ||| || | | |||| | | Sbjct 56375 GCTTCTGTGATAACAGC-----CTCGACGGCCTGGGGGCTCGGGCGGTGACGAAGGTGAG 56429 Query 93081 TGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGC 93140 | | | | || |||||||| || || | || ||||| || || |||| |||||| Sbjct 56430 AGAAGAGAAGACAGGCAAAGTCAGTGTGGAGGCCCTCGTCGCGGGAAATCAGTTCATTGG 56489 Query 93141 TGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTAC 93200 ||| || | || || | || || || ||||| ||||| || || || |||||| | Sbjct 56490 AGAAGGTGAGGCCAGGCATAAGGCCACGCTTCTTCAGCCAGAAGATAGAGGCAAAAGAGC 56549 Query 93201 CAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGG 93260 || ||||| ||||| || ||||||||||| || |||| || | ||||||| ||| Sbjct 56550 CACTGAAAAAGATACCCTCAACGGCTGCAAAGGCAACAAGGCGCTGGGCAAAAGTTG--- 56606 Query 93261 AATTACTGCT----GATCCATTTTAAAGCCCAATCGGCTTTTTT 93300 ||| ||| | ||||||| | |||||||| || || || Sbjct 56607 -ATTCCTGGTCTTGGATCCATCGAATGGCCCAATCAGCCTTCTT 56649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556841838889760