Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq934 150 2e-31 seq1954 93.3 4e-14 >seq934 Length=187681 Score = 150 bits (166), Expect = 2e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || || ||||| || || |||| |||||||| ||| | | Sbjct 9814 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACAATCACACTTGAAGTTGAATCTTCA 9873 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | ||| |||||| |||||||||||||| |||||||| || || Sbjct 9874 GACACGATCGATAACGTTAAAACAAAAATCCAAGACAAGGAGGGAATTCCACCAGACCAG 9933 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || || |||||||| ||| | || ||| ||||| |||| || |||||| Sbjct 9934 CAACGTCTAATTTTCGCCGGCAAGCAGCTTGAAGATGGTCGCACACTCTCAGACTACAAC 9993 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||| || || ||| ||||| | || | || ||||||| ||| Sbjct 9994 ATTCAAAAGGAGTCTACCCTACATCTCGTCCTTCGCCTGCGCGGTGGT 10041 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22220 TGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCG 22279 || |||| |||| || ||| | ||||| || || |||||||||||||||| | | | Sbjct 9587 TGAAAATAGTTGTCAAGACTCTTACCGGAAAGACCATCACTCTTGAAGTGGAGTCTTCGG 9646 Query 22280 ATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAAC 22339 ||||| | || | | ||| || || ||||||||||| || || || || ||||| | Sbjct 9647 ATACCATCGATAACGTGAAAACCAAGATCCAAGACAAGGAAGGCATCCCTCCGGATCAGC 9706 Query 22340 AACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACA 22399 | ||| | || || ||||| || ||| | ||||| ||| || |||| ||||| |||| Sbjct 9707 AGCGTTTGATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGGACTCTCTCTGATTATAACA 9766 Query 22400 TTCAAAAAGAATCCACC 22416 |||| || ||||||||| Sbjct 9767 TTCAGAAGGAATCCACC 9783 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || || ||||| || || | || | || || ||| || | Sbjct 10042 ATGCAAATATTTGTGAAGACATTGACCGGCAAGACTATTACGTTAGAGGTCGAATCCTCA 10101 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || |||||| ||||| ||||||||||| ||||| || ||| Sbjct 10102 GACACAATCGACAACGTGAAGACAAAAATCCAAGATAAGGAGGGTATCCCACCAGACCAA 10161 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || ||||| || || || | || ||| |||||| | ||||| || ||| Sbjct 10162 CAACGTCTCATTTTTGCTGGTAAGCAACTTGAAGATGGCCGCACGCTTTCCGACTATAAC 10221 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || ||| || | || || || ||| |||| || || || Sbjct 10222 ATCCAGAAGGAAAGTACGTTGCACTTGGTCTTGAGATTACGTGGTGG 10268 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| ||||| || || ||| | || || ||||| ||||||| || || || ||| Sbjct 9289 GATGCAGATTTTCGTGAAGACTCTCACGGGCAAAACCATCACTCTCGAGGTTGAGTCCAG 9348 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 ||||| | ||| || | || || || || ||||||||||| || || || || || Sbjct 9349 TGATACGATCGACAATGTTAAGACCAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCA 9408 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 ||||| | || || || || |||||| | || ||| |||||| |||| || ||||| Sbjct 9409 GCAACGCTTGATCTTCGCTGGTAAACAGCTTGAAGATGGCCGCACTCTCTCTGACTACAA 9468 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||| || || || ||| | || || ||| | || | || || ||| Sbjct 9469 CATTCAGAAGGAGTCAACCCTTCACTTGGTTCTTCGCCTCCGTGGCGGT 9517 >seq1954 Length=527115 Score = 93.3 bits (102), Expect = 4e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 22298 AACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCG 22357 ||||| || | |||||||||||| || || || || || |||||||| || || || | Sbjct 282582 AACAATCCATCCCAGACAAGGAGGGCATCCCCCCTGACCAGCAACGTCTCATCTTCGCTG 282641 Query 22358 GCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 |||||||| | ||||| ||||||| | || ||||||||||| || || || |||||| Sbjct 282642 GCAAACAGCTCGAGGACGGCCGCACCCTTTCGGATTACAACATCCAGAAGGAGTCCACC 282700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419714065555060