Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1426 84.2 4e-11 >seq1426 Length=12994 Score = 84.2 bits (92), Expect = 4e-11 Identities = 160/225 (71%), Gaps = 8/225 (4%) Strand=Plus/Plus Query 19710 GCACTCTTCCTTGGTCGCGGGCTCCATGCACCGGTTGCCTACGAAGGCGCCCTCAAGCTC 19769 || || ||||| || ||||| || || ||| | ||| ||||||||| ||||||||| Sbjct 6498 GCGCTGTTCCTCGGCCGCGGCCTGCACTACCCGATCGCCCTCGAAGGCGCGCTCAAGCTC 6557 Query 19770 AAGGAGATCAGTTACATCCACGCAGAGG-GTATTTCGGCAGGCGAACTTAAGCACGGGCC 19828 ||||| |||| ||||||||||| |||| ||| |||| || || | ||||| || || Sbjct 6558 AAGGAAATCACGTACATCCACGCCGAGGCGTA-CGCGGCGGGTGAGTTGAAGCATGGCCC 6616 Query 19829 TCTTGCTCTTCTCAACAAGCCTG-TTCCGGTTGT-AGTGTCTCTGGCAGACCACA-GTTG 19885 || || || || || |||| | | ||||| || | || | | | || ||| | || Sbjct 6617 GCTGGCGCTGGTC-ACCAGCCAGATGCCGGTGGTGACGGTGGC-GCCGAACGACACGCTG 6674 Query 19886 CCTGGATAAGCTAAAGTCAAACATCGACGAAGTGCTTGCCCGTGG 19930 ||||| ||||| ||| ||||| | ||||| | |||||| || Sbjct 6675 -CTGGAAAAGCTCAAGAGCAACATGCAGGAAGTCCGTGCCCGCGG 6718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027800927210884