Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq653 197 3e-45 seq934 185 2e-41 seq2439 129 1e-24 seq529 107 4e-18 seq1640 105 1e-17 seq1332 105 1e-17 seq1954 96.9 6e-15 >seq653 Length=29589 Score = 197 bits (218), Expect = 3e-45 Identities = 381/554 (69%), Gaps = 10/554 (2%) Strand=Plus/Minus Query 268204 CTGGACCCCAGTTGCAATCACAAAGTCCTCTGGCTCAGGAGACTGGAGCATTTTCCACAT 268263 ||||| || || || ||||| || || |||| || ||| ||||| ||||| Sbjct 17312 CTGGATACCCGTCGCGATCACGAAATCTTCTGCAACATCCTGCTGCAGCATCATCCAC-- 17255 Query 268264 TGCTT-CG-ACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGG 268321 ||| | || ||||| ||| ||| || ||||| |||||| || | ||||| || | | Sbjct 17254 TGCATGCGCACATAATCCTTCGCGTGCCCCCAGTCGCGCAATGAAGCTATGTTACCCATG 17195 Query 268322 AACAGGCATTTCTGCTTGCCGAGCTTCACGCGTGCAAGACCGCGAGTGATTTTTCGGGTC 268381 ||| |||| || | || || | | || | ||||||||||||||| || || Sbjct 17194 TACAAGCATGGCTCCAGCCCCTGCGCGATGTTTGACAAACCGCGAGTGATTTTGCGCGTT 17135 Query 268382 ACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAAC 268441 ||||| |||||||| | | ||||| ||||| || || |||||||| ||||| ||| | Sbjct 17134 ACGAATGTCTCGCCTCTACGTGGGCTTTCGTGATTAAACAGGATGCCATTGCAAGCGTAT 17075 Query 268442 ATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCG 268501 |||||||| || || ||||||||||| | |||| ||||| | | |||||| || || Sbjct 17074 ATGCCATAGGCTTCTCGGTAGTTCACCGTCATCCAATATGCGTATAGCTTTGCTACCGCA 17015 Query 268502 TACGGAGAACGTGGATGGAAGGGCGTCGTGATC-TTTTGAGGGATTTCTCGGACTTTGCC 268560 || || || || |||| || || || || || || || |||| | || || Sbjct 17014 TATGGTGATCGGGGATAAAATGGTGT-GTTCTCGCGCTGCGGTGTTTCCTGCACCGATCC 16956 Query 268561 AAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTTTCGAGACCGCAGATTCG 268620 | || || || ||||| || |||||||| ||||| | || || | || | | || Sbjct 16955 GTAAAGTTCCGACGTCGACGCCTGGTAGAATTTTGTCTTCTTCTCCAATCCCAAAAAGCG 16896 Query 268621 GATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGCTGTATACTCCGGCAT 268680 ||||| || |||||||| | || || | ||||| || ||||| ||||| |||||| Sbjct 16895 AATTGCTTCCAGCAAACGCAACGTACCAAGCCCATCAACATCCGCGGTATATTCCGGCGC 16836 Query 268681 CTCGAA--TGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAACCTCATCCGGTTTG 268738 || || | ||| | || || || || || || |||||||||||||| ||||| | Sbjct 16835 TTCAAAACTAACAGC--CACGTGACTTTGAGCACCGAGGTTATAAACCTCGTCCGGCTGT 16778 Query 268739 ACCTGCTGCACGAT 268752 |||| ||||| ||| Sbjct 16777 ACCTCCTGCATGAT 16764 >seq934 Length=187681 Score = 185 bits (204), Expect = 2e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||| | || | ||||| || ||||| ||||| ||||| || || ||| Sbjct 10040 CCACCGCGCAGGCGAAGGACGAGATGTAGGGTAGACTCCTTTTGAATGTTGTAGTCTGAG 9981 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | |||||||| | |||||| |||||||| || || | ||| ||||| |||||| Sbjct 9980 AGTGTGCGACCATCTTCAAGCTGCTTGCCGGCGAAAATTAGACGTTGCTGGTCTGGTGGA 9921 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||| || |||| || ||| ||||| ||||||| ||||| ||| Sbjct 9920 ATTCCCTCCTTGTCTTGGATTTTTGTTTTAACGTTATCGATCGTGTCTGAAGATTCAACT 9861 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || ||||| || | |||||||||||| |||||||| Sbjct 9860 TCAAGTGTGATTGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 9814 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||||||| || || ||||| || || ||||| || || ||| Sbjct 9516 CCGCCACGGAGGCGAAGAACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAG 9457 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | ||| || || ||||| || | | ||| ||||| || || Sbjct 9456 AGAGTGCGGCCATCTTCAAGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGAGGG 9397 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||| || ||||| || || || || || Sbjct 9396 ATGCCCTCCTTGTCCTGGATCTTGGTCTTAACATTGTCGATCGTATCACTGGACTCAACC 9337 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||||| |||||||| ||||| ||||| |||||||| Sbjct 9336 TCGAGAGTGATGGTTTTGCCCGTGAGAGTCTTCACGAAAATCTGCAT 9290 Score = 143 bits (158), Expect = 5e-29 Identities = 172/234 (74%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATA 68287 ||| || || || || | | ||| |||||||| | ||| || || ||||||||||| Sbjct 10275 TTAGTTGCCACCACGTAATCTCAAGACCAAGTGCAACGTACTTTCCTTCTGGATGTTATA 10216 Query 68288 ATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC 68347 ||||| || || | |||||||| | ||||| || || || ||||| | ||||||||| Sbjct 10215 GTCGGAAAGCGTGCGGCCATCTTCAAGTTGCTTACCAGCAAAAATGAGACGTTGTTGGTC 10156 Query 68348 GGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA 68407 ||||| || || ||||| ||||| || |||| ||| ||| ||||| ||||||| || Sbjct 10155 TGGTGGGATACCCTCCTTATCTTGGATTTTTGTCTTCACGTTGTCGATTGTGTCTGAGGA 10096 Query 68408 TTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || || || || || || || || || | ||||| || ||||| ||||| Sbjct 10095 TTCGACCTCTAACGTAATAGTCTTGCCGGTCAATGTCTTCACAAATATTTGCAT 10042 Score = 141 bits (156), Expect = 2e-28 Identities = 164/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || || | || | ||| || ||||| || || || ||||||||||| ||| Sbjct 9812 CCACCGCGGAGACGAAGGACAAGGTGGAGGGTGGATTCCTTCTGAATGTTATAATCAGAG 9753 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || |||| || || || | |||||| |||||||| || | | || || || || || Sbjct 9752 AGAGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCCGGAGGG 9693 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||||||||| ||||| | || ||| |||||||| || | || || ||| Sbjct 9692 ATGCCTTCCTTGTCTTGGATCTTGGTTTTCACGTTATCGATGGTATCCGAAGACTCCACT 9633 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATAT 68455 || | |||||||| ||||| || || |||||||| | ||| Sbjct 9632 TCAAGAGTGATGGTCTTTCCGGTAAGAGTCTTGACAACTAT 9592 >seq2439 Length=16986 Score = 129 bits (142), Expect = 1e-24 Identities = 294/431 (68%), Gaps = 16/431 (4%) Strand=Plus/Minus Query 186088 GCAGTAGCCGCCGTAGCCGAAGCTCGG---GTTGCAATAGCCTCCGCCAATACGTGGCTC 186144 ||| |||||||||||||||||||| || |||| ||| || | ||| || || || || Sbjct 12170 GCAATAGCCGCCGTAGCCGAAGCTGGGATTGTTGTAAT-GCTT--GCCGATGCGCGGATC 12114 Query 186145 GTGCGTGATGCCCTCGATGATGTCCTTTGCATTCAGACCATTCACCATTGCAAACGAGTC 186204 | | || ||| |||||||| | | | || ||| | || || | ||| Sbjct 12113 GAGGCCGACGCCATCGATGATCTGGCGCGTGTCCATGCCACCGGCGATGGCGTAGCTGTC 12054 Query 186205 GAGCTCATTGAAAAACGACACGCGCATCGCGAGGTACGTATTCGCAAACAACTTGA-CGC 186263 ||| || ||||| || | |||||||||||||| || ||||| || |||| ||||| ||| Sbjct 12053 GAGTTCGTTGAAGAAAGCAACGCGCATCGCGAGATAGGTATTGGCGAACAGCTTGATCGC 11994 Query 186264 TCTCTGCCTCGCGTGTTGACATGAACAGCTTTGGCACATCCTTGATGAGAGACTCGCGGC 186323 ||| |||||||| | ||||||| | |||||||| ||| | ||| || Sbjct 11993 -CTCCGCCTCGCGCGCATCGGTGAACAGGATCTCGACATCCTTCTTGATCG---CGCCGC 11938 Query 186324 CGAGCATCTCTACG--AATGCAGTG-GCGTTTTCGCCTTCG-TCGCCAATGATGATGCGA 186379 |||||| | || || | | | ||| || | ||| ||||| | ||||||||| Sbjct 11937 CGAGCAGCAGATCGGCAAAGATGCGCGCGCGCTC-CGATCGCTCGCCGACGATGATGCGC 11879 Query 186380 GAGGGGTGGAGGTTGTCGTAGAGTGCACGACCCTCGCGCAGGAACTCCGGGGAGAATGCG 186439 ||||| || || ||||||| || ||||| || ||||||||||| || ||| ||| Sbjct 11878 GAGGGATGCAGATTGTCGTGCAGCGCACGGCCTTCGCGCAGGAATTCGGGGCTGAAGATC 11819 Query 186440 ATGTTCTTGGTGCCGAACGTGGCGCGCATAGAGTCAACAAACCCGATGGGGATGGTCGAC 186499 | | | |||||||| | || |||| | ||| || || || | |||||||||||| Sbjct 11818 ACCTGATCGGTGCCGAGCCGCGCACGCACATCGTCGACGAAACCAACGGGGATGGTCGAT 11759 Query 186500 TTAATGACAAT 186510 || | ||| || Sbjct 11758 TTGACGACGAT 11748 >seq529 Length=5195 Score = 107 bits (118), Expect = 4e-18 Identities = 258/385 (67%), Gaps = 4/385 (1%) Strand=Plus/Plus Query 186062 AGCAGCTGCTTCGTGTCCTTGGGGAAGCAGTAGCCGCCGTAGCCGAAGCTCGGGTTGCAA 186121 ||||| || ||||||||||||| | ||||||||| ||| | ||||| || ||| Sbjct 2270 AGCAGTTGGCTCGTGTCCTTGGGCAGGCAGTAGCCACCGAAACCGAACGAGGGATTGTTG 2329 Query 186122 TAGCCTCCGCCAATACGTGGCTCGTGCGTGATGCCCTCGATGATGTCCTTTGCATTCAGA 186181 ||| |||| || || || || | | ||| |||| ||| | | || | || Sbjct 2330 TAGTACGCGCCGATCCGCGGGTCCAGGCACACGCCGTCGACGATCTGCCGCGCGTCGAGG 2389 Query 186182 CCATTCACCATTGCAAACGAGTCGAGCTCATTGAAAAACGACACGCGCATCGCGAGGTAC 186241 ||| ||| ||||||||||| || |||||||| || | || |||||||| ||||| Sbjct 2390 CCACGGGCCAGGGCAAACGAGTCCAGTTCATTGAAGAAGGCAACCCGCATCGCCAGGTAG 2449 Query 186242 GTATTCGCAAACAACTTGACGCTCTCTGCCTCGCGTGTTGACATGAACAGCTTTGGCACA 186301 || ||||| |||| ||||| | ||| || |||| | ||| ||| | || Sbjct 2450 GTGTTCGCGAACAGCTTGATGGCCTCGGCTTCGCTCGAACTGGTGAGCAGGACCTGGACG 2509 Query 186302 TCCTTGATGAGAGACTCGC-GGCCGAGCATCTCTACGAATG-CAGTGGCGTTTTCGCCTT 186359 ||| |||| | ||| | ||| | || ||| |||| | | | | | | || Sbjct 2510 TCCGGCGTGAGTG-CTCCCTGGCGCATCAGCTCGCCGAAGGCCCGCGCCCGCTCCGAACG 2568 Query 186360 CGTCGCCAATGATGATGCGAGAGGGGTGGAGGTTGTCGTAGAGTGCACGACCCTCGCGCA 186419 | || || | || ||| | ||||| ||||||||||||| ||| || |||||||||| Sbjct 2569 C-TCTCCCACGACGATCCTCGAGGGATGGAGGTTGTCGTGGAGGGCCTTGCCCTCGCGCA 2627 Query 186420 GGAACTCCGGGGAGAATGCGATGTT 186444 |||| ||||||||||| ||| ||| Sbjct 2628 GGAATTCCGGGGAGAACACGACGTT 2652 >seq1640 Length=153026 Score = 105 bits (116), Expect = 1e-17 Identities = 133/180 (74%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || || || ||||||||| | || | || || || | |||||| ||||| || || Sbjct 9684 TTCTGAATATTATAATCGCTCAAGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCAAAAATC 9743 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 | | || ||||| || || |||||||||||||| |||||||| |||||| ||| Sbjct 9744 AAACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGAATCTTGCTCTTGACATTGTCG 9803 Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || ||||| ||| || || || || | |||||| || || || ||||||||||||||||| Sbjct 9804 ATTGTGTC-GCTCGACTCCACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTGACGAA 9862 >seq1332 Length=137326 Score = 105 bits (116), Expect = 1e-17 Identities = 199/287 (69%), Gaps = 12/287 (4%) Strand=Plus/Minus Query 268247 TGGAGCATTTTCCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCG 268306 || ||||| |||||| |||| || || || ||| ||||| |||||||| ||| Sbjct 20250 TGCAGCATGCGCCACATCCCTTCAACGTATTCTTTCGCGAAACCCCAGTCGCGCTTGGCG 20191 Query 268307 TCCATGTTCCCGAGGAACAGGCATTTCT-GCTTGCCGA----GCTTCACGCGTGCAAGAC 268361 |||| ||| || || ||| || || ||||||| | | || ||| | | | Sbjct 20190 TCCAAGTTACCCAGCTCCAG-CACCTCGAGCTTGCCCAAGCGGATTTTGGCGAACGCGTC 20132 Query 268362 CGCGAGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGA 268421 || ||||||||||||| || || | |||||| | ||||||||||||||||| | Sbjct 20131 CG----TGATTTTTCGGGTGACAAATTCCCGGCCACGCAATGGGCTCTCGTGGTTGAACA 20076 Query 268422 GGATGCCGTTGCACGC-GAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTAT 268480 |||||||| | ||| | ||| |||||||| |||||||||||||| | |||||| Sbjct 20075 GGATGCCGCT-CACTCCGAAGATGCCATAGCTTTCACGGTAGTTCACAGTCATCCAGTGG 20017 Query 268481 GCAAACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGGCGT 268527 ||| | | ||| || || |||| ||| || || | ||| ||||| Sbjct 20016 GCATAGAGCTTGGCCACGCCGTAGGGACTGCGCGGGTAGAAAGGCGT 19970 >seq1954 Length=527115 Score = 96.9 bits (106), Expect = 6e-15 Identities = 80/98 (82%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 68368 CTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGG 68427 |||||||||| | ||||||| ||||||||||| | || || || || | |||||| | Sbjct 282526 CTTGAATCTTGGTCTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAG 282467 Query 68428 TTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 | || |||||||||||||||||||| ||||||||| || Sbjct 282466 TCTTACCCGTGAGGGTCTTGACGAAGATCTGCATTTTG 282429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921591018757280