Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq934 116 4e-21 seq1640 93.3 5e-14 >seq934 Length=187681 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||| ||||| |||| ||||| || | || || ||||| ||||||||||| Sbjct 9481 CTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCAAGCTGTTTACCAGCGAA 9422 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || | || |||||||| | || | || |||||||||| || | || || | | | | Sbjct 9421 GATCAAGCGTTGCTGGTCAGGAGGGATGCCCTCCTTGTCC-TGGATCTTGGTCTTAACAT 9363 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||| || || || || || |||| ||||||||||||||||| || ||||| | Sbjct 9362 TGTCGATCGTATCACTGGACTCAACCTCGAGAGTGATGGTTTTGCCCGTGAGAGTCTTCA 9303 Query 42196 CAAAGATTTGCAT 42208 | || || ||||| Sbjct 9302 CGAAAATCTGCAT 9290 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || || | ||| | ||| ||||| ||||| || || ||||| || || || || || | Sbjct 10268 CCACCACGTAATCTCAAGACCAAGTGCAACGTACTTTCCTTCTGGATGTTATAGTCGGAA 10209 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || || || ||||||||||| || ||||| || || ||||| | ||| Sbjct 10208 AGCGTGCGGCCATCTTCAAGTTGCTTACCAGCAAAAATGAGACGTTGTTGGTCTGGTGGG 10149 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 42160 | | |||||| | | || ||||||| | ||| | | | ||||| ||||| || Sbjct 10148 ATACCCTCCTTAT-CTTGGATTTTTGTCTTCACGTTGTCGATTGTGTCTGAGGATTCGAC 10090 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | ||| || || ||||| || | ||||| ||||| |||||||| Sbjct 10089 CTCTAACGTAATAGTCTTGCCGGTCAATGTCTTCACAAATATTTGCAT 10042 Score = 93.3 bits (102), Expect = 5e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||||||||| ||||| || | || || || | || || |||||||| || ||||| Sbjct 10005 CTCCTTTTGAATGTTGTAGTCTGAGAGTGTGCGACCATCTTCAAGCTGCTTGCCGGCGAA 9946 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCG- 42135 || || || |||||||| | ||| | | |||||||| | || ||||||||| | || Sbjct 9945 AATTAGACGTTGCTGGTCTGGTGGAATTCCCTCCTTGT-CTTGGATTTTTGTTTTAACGT 9887 Query 42136 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | |||||| ||||| || || | ||||| || || || || | ||||| | Sbjct 9886 TATCGATCGTGTCTGAAGATTCAACTTCAAGTGTGATTGTCTTTCCGGTCAAGGTCTTGA 9827 Query 42196 CAAAGATTTGCAT 42208 | || || ||||| Sbjct 9826 CGAAAATCTGCAT 9814 >seq1640 Length=153026 Score = 93.3 bits (102), Expect = 5e-14 Identities = 132/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078 |||| |||||||| ||||| || || || |||| || |||||||| || || || | Sbjct 9682 CCTTCTGAATATTATAATCGCTCAAGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCAAAAA 9741 Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGTC 42137 | | ||||||||||| | || | || ||||||||| ||| | || | |||| | Sbjct 9742 TCAAACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCC-TGAATCTTGCTCTTGACATTG 9800 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | ||||||||||| ||||| |||| ||||| || ||||| || || ||||| || Sbjct 9801 TCGATTGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTGACG 9860 Query 42198 AAG 42200 ||| Sbjct 9861 AAG 9863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543194303604160