Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq934 141 9e-29
seq1640 89.7 5e-13
>seq934
Length=187681
Score = 141 bits (156), Expect = 9e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||||| | ||| || ||||| | || || || |||||||||||||| ||||
Sbjct 10041 ACCACCGCGCAGGCGAAGGACGAGATGTAGGGTAGACTCCTTTTGAATGTTGTAGTCTGA 9982
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| ||||| | |||||||||||||||||||| |||| || || |||||||| || ||
Sbjct 9981 GAGTGTGCGACCATCTTCAAGCTGCTTGCCGGCGAAAATTAGACGTTGCTGGTCTGGTGG 9922
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|||||| || || ||||| |||||| || || || | || || | || ||
Sbjct 9921 AATTCCCTCCTTGTCTTGGATTTTTGTTTTAACGTTATCGATCGTGTCTGAAGATTCAAC 9862
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||| | || | ||||| |||||||| || || |||||||| |||||
Sbjct 9861 TTCAAGTGTGATTGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 9814
Score = 105 bits (116), Expect = 7e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
|||||| || | | ||| || | |||| || || || || ||||||||||| || |
Sbjct 9517 ACCGCCACGGAGGCGAAGAACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGA 9458
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| ||||| | ||||||||||| || || || | || | || |||||||| |||||
Sbjct 9457 GAGAGTGCGGCCATCTTCAAGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGAGG 9398
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| || || || || || || || ||| ||| || | ||||||| || || ||
Sbjct 9397 GATGCCCTCCTTGTCCTGGATCTTGGTCTTAACATTGTCGATCGTATCACTGGACTCAAC 9338
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | ||| | ||| ||||| || | ||| || |||||||| |||||
Sbjct 9337 CTCGAGAGTGATGGTTTTGCCCGTGAGAGTCTTCACGAAAATCTGCAT 9290
Score = 98.7 bits (108), Expect = 1e-15
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 64252 TTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATA 64311
||| || || ||||| || || | | ||||| | |||||||| ||||| || ||| |
Sbjct 10233 TTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCATCTTCAAGTTGCTTACCAGCAAA 10174
Query 64312 AATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAAC 64371
|||||| || || ||||| || || || || || || ||||| |||||| ||| ||
Sbjct 10173 AATGAGACGTTGTTGGTCTGGTGGGATACCCTCCTTATCTTGGATTTTTGTCTTCACGTT 10114
Query 64372 CTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTAC 64431
|| | ||| || || || || |||| || | |||||||||||||| || || ||
Sbjct 10113 GTCGATTGTGTCTGAGGATTCGACCTCTAACGTAATAGTCTTGCCGGTCAATGTCTTCAC 10054
Query 64432 GAAAATTTGCAT 64443
|| ||||||||
Sbjct 10053 AAATATTTGCAT 10042
>seq1640
Length=153026
Score = 89.7 bits (98), Expect = 5e-13
Identities = 127/179 (71%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 64256 TTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATG 64315
|| ||||| || ||||| | |||||| |||| || |||||||| |||||| ||||
Sbjct 9684 TTCTGAATATTATAATCGCTCAAGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCAAAAATC 9743
Query 64316 AGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCC 64375
| ||||||||||| ||||| || ||||| || || || || || ||| ||| ||
Sbjct 9744 AAACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGAATCTTGCTCTTGACATTGTCG 9803
Query 64376 ACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAA 64434
| ||| || | | ||||| || | || | ||||||||||| | || || |||||
Sbjct 9804 ATTGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTGACGAA 9862
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499627787094560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |