Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2528 161 1e-34 >seq2528 Length=594046 Score = 161 bits (178), Expect = 1e-34 Identities = 425/644 (66%), Gaps = 6/644 (1%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | || |||| |||||| || || ||| ||| || || | ||| ||||| Sbjct 60773 AACTACCAATATTTTGGCTTCAAGACACTAGAGCGGTCTTATCTGTTGCGGATCAATGGC 60832 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | |||| ||||||| ||||| || || | ||||| || || | || ||||||||| | Sbjct 60833 AAGGTTGCCGAGCGTCCGCAGCACATGATTATGCGGGTTGCGGTTGGTATTCACGGCGAG 60892 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894 ||||| ||| | | ||| || ||| | || | || || Sbjct 60893 GACATTGAGAAGGCGATTGAAACTTACAATTTGATGTCCCAAAAATTCTTCACTCACGCT 60952 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953 | || || || ||||||||||| || || |||||| ||| | || |||||||| || Sbjct 60953 TCTCCCACTCTTTTCAACGCGGGAACTCCACAGCCACAAATGGCATCCTGTTTCCTCATC 61012 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 ||| | |||| || ||| || || | ||| | ||||| |||||| || Sbjct 61013 GAC-ATGAAGGAGGATAGTATCGAAGGTATCTACGATACGCTCAAAACCTGTGCACTGAT 61071 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCC 94071 || || || || || || || | | ||| ||| |||| ||||||| || ||| Sbjct 61072 TTCCAAGACAGCTGGTGGTATTGGTCTTAATGTACAC--CGTATCCGTGCCACTGGCTCC 61129 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 ||||| || || |||||| |||| ||||| || |||| |||||||| ||||||||| Sbjct 61130 TACATTGCAGGAACAAATGGCTCCTCTAACGGAATCATCCCCATGCTCCGTGTCTTCAAC 61189 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| | || ||||| || ||||||||||| | | ||| | ||||| ||||| Sbjct 61190 AACACTGCTCGCTATGTTGACCAGGGTGGCAATAAACGACCAGGTGCCTTCGCCATCTAT 61249 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 || || ||||||||| | || | | || | || || || || |||||||| || Sbjct 61250 CTTGAACCCTGGCACTCCGATATCTTCGAATTTTTGGATCTCCGTAAAAACCACGGAAAA 61309 Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311 || | ||| || | || ||||| ||||||||| ||||| | |||||||| Sbjct 61310 GAGGAAGTGAGAGCTCGTGATCTCTTTCTTGCTCTCTGGACCCCAGATTTGTTTATGAAG 61369 Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGA 94355 || || ||||| ||| || |||| | || ||||||||||| Sbjct 61370 CGGGTTGAGAAGAACGGCGATTGGACCTTGTTCTGTCCCAATGA 61413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494706354675040