Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_011287.1
Length=58554
Score E
Sequences producing significant alignments: (Bits) Value
seq559 390 4e-104
>seq559
Length=35318
Score = 390 bits (432), Expect = 4e-104
Identities = 606/852 (71%), Gaps = 28/852 (3%)
Strand=Plus/Plus
Query 42795 CAAGTTCAACGACCTCATCCAAAGCCTGCACCGGATCCAGCGGTTCGGCCAAACCCACCC 42854
||||||||||||| ||||||| | |||||| ||||||| ||| || | |||||
Sbjct 24654 CAAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGCTTCCAGCAGTCGCACCC 24713
Query 42855 CTGCACAGCCCATCTCATCCACTCCGAAACCGAACGGGAAGTGGTTCGCATCATCCGCGA 42914
| | | | |||||||| ||||||| || ||||| || || ||| | | | |
Sbjct 24714 GGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGTGCGCGACCTGCAGGC 24773
Query 42915 GAAATGGGCACAACACCGAGAGTTGACATCAACGATGACCGACATCATCCACGAATACGG 42974
||| ||||| | ||| ||| ||| | ||| |||| ||||||| |||||| ||
Sbjct 24774 GAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGATCATCCGCGAATATGG 24833
Query 42975 GCTTGACCCCGAGG-CAATCTCGGAAGCGCTGCAACGCTCCATCGGATGCGAACGCATCG 43033
|| | | || | | ||||| ||||| | ||||| ||||| ||| || |
Sbjct 24834 CCTGCAGCATGACGTCGCCCTCGGC-GCGCTCAAGCGCTCGATCGGCGTCGAGCGGCAGG 24892
Query 43034 AAGCATCCGGCGAGGGATGGCTGTTCGCCAACAACGACTGCGTACCCGAAACCGAGTCGA 43093
| | | ||||| || ||| | | || ||||||||||||| || | | |
Sbjct 24893 AGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCGATGAGGCTGCCCGGC 24952
Query 43094 TGGACGACAACTCGGTGGACCTGATCGTCACCAGCATTCCGTTCTCGAACCACTACGAAT 43153
||||||| ||||| ||||||||||||||| ||| |||||| ||||||||||| |
Sbjct 24953 TGGACGAAGGATCGGTCGACCTGATCGTCACCTCCATCCCGTTCAGCAACCACTACGAGT 25012
Query 43154 ACACGCCGAGCTACAACGACTTCGGCCACACCGACGACAACGCCCATTTCTGGGCCCAGA 43213
||||||||||||||||||||||||||||||| ||||| ||| ||||||| || ||||
Sbjct 25013 ACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGCATTTCTTCGCGCAGA 25072
Query 43214 TGGACTACCTCACGCCGCAACTGCTGCGGGTCCTCGCTCCTGGCCGGATCTATGCCTG-- 43271
|||| | || |||||| | ||||| || | || || || |||||| || |||||
Sbjct 25073 TGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCGCCGGGCCGGCTC---GCCTGCA 25129
Query 43272 -CCACGTCAAGGACCGCATCTTGTTCGGCAACGTCACCGGCGCAGGCGTCCCCACCGTCT 43330
|||||| |||||||| ||| ||||||| || ||||||| || || || ||||||
Sbjct 25130 TCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGGGTGTGCCGACCGTCA 25189
Query 43331 CCCCGTTCCACGCCGAGGCGATCTTTCAC---GGCCGCAAACACGGCTTCGACTACCTCG 43387
|||||||||||| || ||| ||| ||| ||||||||| | | | | |
Sbjct 25190 ATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC---CACGGCTTCCAGTTCATGG 25246
Query 43388 GCATGATCACCGTGGTCACCGATGTGGTGCGGGAAAACAACCAGACGTACCGGCTGGGCT 43447
||||||||||||| |||||||| || ||||| || ||||||||||| ||||| ||| |
Sbjct 25247 GCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCCTG---T 25303
Query 43448 GGTCCGAGC-AG-TGC--AAAGACGCCACCAAGATGGGCGTTGGCTCCCCGGAATACGTT 43503
|| | ||| || ||| || |||| ||| ||||||||| ||| ||| ||||||||
Sbjct 25304 CGTAC-AGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCAGCCCCGAATACGTG 25362
Query 43504 CTGCTGTTCCATAAACCGCAGACAGACAGGTCGAAGGGATACGCCGACACCCCCGTCACC 43563
|||||| | | || ||||| | ||| | || || || |||||||| || ||||||
Sbjct 25363 CTGCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCCGACACGCCGGTCACC 25422
Query 43564 AAATCCAAGGACGA---CTACAGCCGTGCCCGTTGGCAGGTGGACGCGCACGCGTTCTGG 43620
|| || | ||| |||||||| || || |||||||| ||||| ||||| ||||||
Sbjct 25423 AA--GGAACG-CGAGAGCTACAGCCTGGCGCGGTGGCAGGTCGACGCCCACGCCTTCTGG 25479
Query 43621 CGCTCGAGCGGC 43632
||||| ||||||
Sbjct 25480 CGCTCCAGCGGC 25491
Score = 271 bits (300), Expect = 3e-68
Identities = 280/362 (77%), Gaps = 6/362 (2%)
Strand=Plus/Plus
Query 41491 ATCTACCTCACCAACTACGAGAGCGTTCGCGATGGAAAGCTCGACCCGACACTGTTCACG 41550
|||| ||| ||||| ||||||||||| ||||| || ||| ||||| ||| |||||
Sbjct 22784 ATCTTCCTGACCAATTACGAGAGCGTCCGCGACGGCAAGGTCGACGTCACAACCTTCACC 22843
Query 41551 GCCGTTTCACTCGACGAGGCGAGCGTGCTGCGCTCGTTCGGGTCCAAGACGTACCAGTCG 41610
||||| || |||||||||||| | || |||||||||||||| ||||| | |||| ||
Sbjct 22844 GCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGGGTCAAAGACCTTCCAGACG 22903
Query 41611 TTCCTGGAGCTGTTCGACGGGGTGCCCTACCGGTACGTCGCGACGGCCACGCCATCGCCG 41670
|||||| ||| ||||| | |||||| ||||| | |||||||| ||||| || |||||
Sbjct 22904 TTCCTGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCCTCGCCC 22963
Query 41671 AACCGGTACAAGGAGCTGATCCACTACGCGGGTTATCTCGGGGTGATGGACACCGGTGCG 41730
||||| ||||||||||||||||| ||||| |||| ||||| ||||||||||||||
Sbjct 22964 AACCGCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACCGGCCAA 23023
Query 41731 GCGCTCACGCGTTGGTTCCAGCGGGAC-TCGACCAAGGCGAACAACCTCACCCTGTACCC 41789
|||||||| || | |||||||| || ||| |||||| | | |||||||| |||||
Sbjct 23024 GCGCTCACCCGCTTCTTCCAGCGCAACAGCGA-GAAGGCGGGCGATCTCACCCTCTACCC 23082
Query 41790 ACACAAGACGAAC--GAGTTTTTCCTGTGGCTCAACACCTGGGCTGCATTCGTCCAACGA 41847
|||||| |||| ||||| | |||||||| || | |||||| | ||| | || ||
Sbjct 23083 GCACAAG--GAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGGCCGTTTTCCTGCAGCGC 23140
Query 41848 CC 41849
||
Sbjct 23141 CC 23142
Score = 105 bits (116), Expect = 3e-18
Identities = 104/133 (78%), Gaps = 6/133 (5%)
Strand=Plus/Plus
Query 44886 CTGCCCCTTGCAGTTCGACATCGTTGACCGGCTGATCACTCGCTTCTCGAATCCTGGCGA 44945
||||||| | |||||||||||||| |||||||||||| || | ||| | | |||||
Sbjct 25897 CTGCCCCCTCCAGTTCGACATCGTCGACCGGCTGATCGAGCGATACTCTATGCGCGGCGA 25956
Query 44946 GTTGGTGTTCGACCCGTTCGGCGGGCTGGGCACCGTGCCGTTGCGGGCACTGAAACTT-- 45003
| |||||||||| |||||| |||| || |||||||||||| |||| || || |||
Sbjct 25957 GCTGGTGTTCGATCCGTTCTGCGGCCTCGGCACCGTGCCGATGCGCGC---GATCCTTGC 26013
Query 45004 -GGTCGGCGCGGC 45015
||||| ||||||
Sbjct 26014 CGGTCGCCGCGGC 26026
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 187245142891808
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |