Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2528 129 6e-25 seq934 96.9 3e-15 seq2704 93.3 4e-14 seq1640 91.5 1e-13 >seq2528 Length=594046 Score = 129 bits (142), Expect = 6e-25 Identities = 297/442 (67%), Gaps = 9/442 (2%) Strand=Plus/Minus Query 154021 AGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGCTTT---CCGC 154077 |||| |||| |||||||||||||| |||| ||| | ||||||| || || || | Sbjct 61274 AGATATCGGAGTGCCAGGGTTCAAGATAGATGGCGAAGGCACCTGGTCGTTTATTGCCAC 61215 Query 154078 CCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTG 154137 |||| || || | ||| | | ||||||||||| || | |||||| | ||| | | Sbjct 61214 CCTGGTCAACATAGCGAGCAGTGTTGTTGAAGACACGGAGCATGGGGATGATTCCGTTAG 61155 Query 154138 CGGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGC 154197 || ||| || || || | | ||| ||| || | | || || |||| | Sbjct 61154 AGGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTGGCACGGATACGGTGTACATTAAGAC 61095 Query 154198 CAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGCCG 154256 |||| || || || || ||| || || || ||| ||||| |||||| || Sbjct 61094 CAATACCACCAGCTGT-CTTGGAAATCAGTGCACAGGTTTTGAGCGTATCGTAGATACCT 61036 Query 154257 TCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTT 154316 ||||| ||||| || | | ||| | |||||| || |||||| || | ||| Sbjct 61035 TCGATACTATCCTCCTTCATGTCGATGAGGAAACAGGATGCCATTTGTGGCTGTGGAGTT 60976 Query 154317 CCCGCC--GAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGT 154374 ||||| |||||||| ||||| ||||| || || | ||||||| ||||| || Sbjct 60975 CCCGCGTTGAAAAGAG--TGGGAGAAGCGTGAGTGAAGAATTTTTGGGACATCAAATTGT 60918 Query 154375 ACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCA 154434 | ||||| || || | || || || ||||||||||| || | ||| || ||||| | || Sbjct 60917 AAGTTTCAATCGCCTTCTCAATGTCCTCGCCGTGAATACCAACCGCAACCCGCATAATCA 60858 Query 154435 TGTGCTGCGGACGTTCGGCGAC 154456 ||||||||||||| ||||| || Sbjct 60857 TGTGCTGCGGACGCTCGGCAAC 60836 >seq934 Length=187681 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| || | || | ||| || || | | |||||||||| |||||||||||||| Sbjct 9516 CCGCCACGGAGGCGAAGAACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAG 9457 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || || || || |||||||| | |||| | || || ||||| ||||| Sbjct 9456 AGAGTGCGGCCATCTTCAAGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGAGGG 9397 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA--ATTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| || | || || ||| |||| || | || || | ||||| | Sbjct 9396 ATGCCCTCCTTGTC-CTGGATCTTGGTCTTAACATTG-TCGATCGTATCACTGGACTCAA 9339 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| || | ||||| || || ||||| || || ||||||||||| Sbjct 9338 CCTCGAGAGTGATGGTTTTGCCCGTGAGAGTCTTCACGAAAATCTGCAT 9290 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| || | || | ||||| | | ||||||||||||||||||||||| | Sbjct 10040 CCACCGCGCAGGCGAAGGACGAGATGTAGGGTAGACTCCTTTTGAATGTTGTAGTC--TG 9983 Query 138448 ATAGTACGCGAG--TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505 | ||| |||| || || || || || |||| | |||||||| || ||||| || | Sbjct 9982 AGAGTGTGCGACCATCTTCAAGCTGCTTGCCGGCGAAAATTAGACGTTGCTGGTCTGGTG 9923 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGT-TCCACGGTGTCGGTCGACTCC 138564 | || || || ||||| ||||||| ||||||| | || | ||||| | || || Sbjct 9922 GAATTCCCTCCTTGTCTTGGATTTTT-GTTTTAACGTTATCGATCGTGTCTGAAGATTCA 9864 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || || | || | || || || |||| || || || ||||||||||| Sbjct 9863 ACTTCAAGTGTGATTGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 9814 >seq2704 Length=633058 Score = 93.3 bits (102), Expect = 4e-14 Identities = 294/449 (65%), Gaps = 9/449 (2%) Strand=Plus/Minus Query 52392 GCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCC 52451 ||| ||||| | || ||||| || || ||||| | ||||| ||| |||||| Sbjct 56598 GCCCAGCGCCTTGTTGCCTTTGCAGCCGTTGAGGGTATCTTTTTCAGTGGCTCTTTTGCC 56539 Query 52452 GCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTG 52511 | ||||| | | || | | ||| | ||||| ||||| || ||| ||| || || Sbjct 56538 TCTATCTTCTGGCTGAAGAAGCGTGGCCTTATGCCTGGCCTCACCTTCTCCAATGAACTG 56479 Query 52512 ATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAG-ACGCGCGT 52570 || || |||||||| || || ||||| |||||||| || || || | || ||| Sbjct 56478 ATTTCCCGCGACGAGGGCCTCCACACTGACTTTGCCTGTCTTCTCTTCTCTCACCTTCGT 56419 Query 52571 GACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTT--CAAGGAGGCGGTGGCTATC 52628 |||| | | | | | || || ||| |||| || || || || | ||| Sbjct 56418 CACCGCCCGA--GCCCCCAGGC-CG-TC--GAGGCTGTTATCACAGAAGCTGTCGAGATC 56365 Query 52629 GAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCC 52688 ||||| || || || || | || || || || || || ||||||||| | | | Sbjct 56364 GAAAAAGAATTCTTGACCGATGCCCTTCCTTGCGCCCTTCTCGGCATGAACTCCAAACTC 56305 Query 52689 ATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAG 52748 |||||| | |||||||||||||| || || | || | || || || | ||| Sbjct 56304 ATGTGCCAATACATCGAGTTTGTCGCCGACAGGTTGCTTGTCGCTCTTGGTAATAAGAAG 56245 Query 52749 TACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACC 52808 |||| || || || || || || || ||| ||||||||||||| || ||||| Sbjct 56244 TACTATAATGCGACGAACCCATTCGACTTCATGGACAACATTTCGCTGTCCGGTAAGACA 56185 Query 52809 AACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 ||||| || |||||||| |||||||| || Sbjct 56184 AACTTCTTTGAGAAGCGCGTCGGCGACTA 56156 >seq1640 Length=153026 Score = 91.5 bits (100), Expect = 1e-13 Identities = 132/183 (72%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| ||||| || || ||||||| || || ||||||||| || || |||| | | | Sbjct 9682 CCTTCTGAATATTATAATCGCTCAAGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCAAAAA 9741 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542 | | |||||| ||||| ||||| || ||||| ||||| ||| | || | || | ||| Sbjct 9742 TCAAACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCC-TGAATCTTGCTCTTGACATTG 9800 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 | | | |||||| ||||||||||||||| || | || || || || || || || || Sbjct 9801 T-CGATTGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTGAC 9859 Query 138603 AAA 138605 || Sbjct 9860 GAA 9862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496245502265280