Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq2528 129 6e-25
seq934 96.9 3e-15
seq2704 93.3 4e-14
seq1640 91.5 1e-13
>seq2528
Length=594046
Score = 129 bits (142), Expect = 6e-25
Identities = 297/442 (67%), Gaps = 9/442 (2%)
Strand=Plus/Minus
Query 154021 AGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGCTTT---CCGC 154077
|||| |||| |||||||||||||| |||| ||| | ||||||| || || || |
Sbjct 61274 AGATATCGGAGTGCCAGGGTTCAAGATAGATGGCGAAGGCACCTGGTCGTTTATTGCCAC 61215
Query 154078 CCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTG 154137
|||| || || | ||| | | ||||||||||| || | |||||| | ||| | |
Sbjct 61214 CCTGGTCAACATAGCGAGCAGTGTTGTTGAAGACACGGAGCATGGGGATGATTCCGTTAG 61155
Query 154138 CGGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGC 154197
|| ||| || || || | | ||| ||| || | | || || |||| |
Sbjct 61154 AGGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTGGCACGGATACGGTGTACATTAAGAC 61095
Query 154198 CAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGCCG 154256
|||| || || || || ||| || || || ||| ||||| |||||| ||
Sbjct 61094 CAATACCACCAGCTGT-CTTGGAAATCAGTGCACAGGTTTTGAGCGTATCGTAGATACCT 61036
Query 154257 TCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTT 154316
||||| ||||| || | | ||| | |||||| || |||||| || | |||
Sbjct 61035 TCGATACTATCCTCCTTCATGTCGATGAGGAAACAGGATGCCATTTGTGGCTGTGGAGTT 60976
Query 154317 CCCGCC--GAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGT 154374
||||| |||||||| ||||| ||||| || || | ||||||| ||||| ||
Sbjct 60975 CCCGCGTTGAAAAGAG--TGGGAGAAGCGTGAGTGAAGAATTTTTGGGACATCAAATTGT 60918
Query 154375 ACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCA 154434
| ||||| || || | || || || ||||||||||| || | ||| || ||||| | ||
Sbjct 60917 AAGTTTCAATCGCCTTCTCAATGTCCTCGCCGTGAATACCAACCGCAACCCGCATAATCA 60858
Query 154435 TGTGCTGCGGACGTTCGGCGAC 154456
||||||||||||| ||||| ||
Sbjct 60857 TGTGCTGCGGACGCTCGGCAAC 60836
>seq934
Length=187681
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
||||| || | || | ||| || || | | |||||||||| ||||||||||||||
Sbjct 9516 CCGCCACGGAGGCGAAGAACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAG 9457
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || || || || |||||||| | |||| | || || ||||| |||||
Sbjct 9456 AGAGTGCGGCCATCTTCAAGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGAGGG 9397
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA--ATTGTTCCACGGTGTCGGTCGACTCCA 138565
|| || || ||||| || | || || ||| |||| || | || || | ||||| |
Sbjct 9396 ATGCCCTCCTTGTC-CTGGATCTTGGTCTTAACATTG-TCGATCGTATCACTGGACTCAA 9339
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||||| || | ||||| || || ||||| || || |||||||||||
Sbjct 9338 CCTCGAGAGTGATGGTTTTGCCCGTGAGAGTCTTCACGAAAATCTGCAT 9290
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| || | || | ||||| | | ||||||||||||||||||||||| |
Sbjct 10040 CCACCGCGCAGGCGAAGGACGAGATGTAGGGTAGACTCCTTTTGAATGTTGTAGTC--TG 9983
Query 138448 ATAGTACGCGAG--TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505
| ||| |||| || || || || || |||| | |||||||| || ||||| || |
Sbjct 9982 AGAGTGTGCGACCATCTTCAAGCTGCTTGCCGGCGAAAATTAGACGTTGCTGGTCTGGTG 9923
Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGT-TCCACGGTGTCGGTCGACTCC 138564
| || || || ||||| ||||||| ||||||| | || | ||||| | || ||
Sbjct 9922 GAATTCCCTCCTTGTCTTGGATTTTT-GTTTTAACGTTATCGATCGTGTCTGAAGATTCA 9864
Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| || | || | || || || |||| || || || |||||||||||
Sbjct 9863 ACTTCAAGTGTGATTGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 9814
>seq2704
Length=633058
Score = 93.3 bits (102), Expect = 4e-14
Identities = 294/449 (65%), Gaps = 9/449 (2%)
Strand=Plus/Minus
Query 52392 GCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCC 52451
||| ||||| | || ||||| || || ||||| | ||||| ||| ||||||
Sbjct 56598 GCCCAGCGCCTTGTTGCCTTTGCAGCCGTTGAGGGTATCTTTTTCAGTGGCTCTTTTGCC 56539
Query 52452 GCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTG 52511
| ||||| | | || | | ||| | ||||| ||||| || ||| ||| || ||
Sbjct 56538 TCTATCTTCTGGCTGAAGAAGCGTGGCCTTATGCCTGGCCTCACCTTCTCCAATGAACTG 56479
Query 52512 ATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAG-ACGCGCGT 52570
|| || |||||||| || || ||||| |||||||| || || || | || |||
Sbjct 56478 ATTTCCCGCGACGAGGGCCTCCACACTGACTTTGCCTGTCTTCTCTTCTCTCACCTTCGT 56419
Query 52571 GACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTT--CAAGGAGGCGGTGGCTATC 52628
|||| | | | | | || || ||| |||| || || || || | |||
Sbjct 56418 CACCGCCCGA--GCCCCCAGGC-CG-TC--GAGGCTGTTATCACAGAAGCTGTCGAGATC 56365
Query 52629 GAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCC 52688
||||| || || || || | || || || || || || ||||||||| | | |
Sbjct 56364 GAAAAAGAATTCTTGACCGATGCCCTTCCTTGCGCCCTTCTCGGCATGAACTCCAAACTC 56305
Query 52689 ATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAG 52748
|||||| | |||||||||||||| || || | || | || || || | |||
Sbjct 56304 ATGTGCCAATACATCGAGTTTGTCGCCGACAGGTTGCTTGTCGCTCTTGGTAATAAGAAG 56245
Query 52749 TACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACC 52808
|||| || || || || || || || ||| ||||||||||||| || |||||
Sbjct 56244 TACTATAATGCGACGAACCCATTCGACTTCATGGACAACATTTCGCTGTCCGGTAAGACA 56185
Query 52809 AACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
||||| || |||||||| |||||||| ||
Sbjct 56184 AACTTCTTTGAGAAGCGCGTCGGCGACTA 56156
>seq1640
Length=153026
Score = 91.5 bits (100), Expect = 1e-13
Identities = 132/183 (72%), Gaps = 4/183 (2%)
Strand=Plus/Plus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
|||| ||||| || || ||||||| || || ||||||||| || || |||| | | |
Sbjct 9682 CCTTCTGAATATTATAATCGCTCAAGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCAAAAA 9741
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542
| | |||||| ||||| ||||| || ||||| ||||| ||| | || | || | |||
Sbjct 9742 TCAAACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCC-TGAATCTTGCTCTTGACATTG 9800
Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602
| | | |||||| ||||||||||||||| || | || || || || || || || ||
Sbjct 9801 T-CGATTGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTGAC 9859
Query 138603 AAA 138605
||
Sbjct 9860 GAA 9862
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496245502265280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |