Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_011589.1 Length=40287 Score E Sequences producing significant alignments: (Bits) Value seq535 239 1e-58 seq1183 91.5 4e-14 >seq535 Length=9462 Score = 239 bits (264), Expect = 1e-58 Identities = 590/882 (67%), Gaps = 31/882 (4%) Strand=Plus/Minus Query 8582 CAGTGACTTCCCGGTGCTGCTCGAAAGCACGATGCACAAGGCACTGCAGGCGGCCTACGC 8641 ||| |||||||| |||||| |||||| | |||| ||| | || |||||||| ||||| Sbjct 6960 CAGCGACTTCCCCGTGCTGTTCGAAAACGCGATCCACCGCACGCTTCAGGCGGCGTACGC 6901 Query 8642 CGTTGCGCCGGACACCTGGTCCCGCTGGTGCGTCACCGGCACCGTCAGTGATTTCCGCGA 8701 | |||||||||| ||||| |||| |||| |||||||| || | || |||||||| Sbjct 6900 CACCACGCCGGACACGTGGTCGCGCTTTTGCGGTACCGGCACGGTGACCGACTTCCGCGA 6841 Query 8702 GCATTCGCGCTACC-GCGTGGGCAGCATTGGCAACCTGGACAAGCTGACCGAGGCTGGCG 8760 || ||||||| ||| || | | || || ||||| | | |||||| |||| Sbjct 6840 TCACAGCCGCTACCTGCGCGGCTCGT-TCGGGGCGCTCGACAACGTCAACGAGGCCGGCG 6782 Query 8761 AGTTCAAGAACAAGAAGATCCCGGACGGCGAGAAGGCAACCATCACCGCTGGCACCAAGG 8820 |||||||||||||| |||||| ||| | ||||| | ||| ||| || |||| Sbjct 6781 AGTTCAAGAACAAGCCGATCCCCGACTTGGCGAAGGAGAAGATCCGCGCGACGACGAAGG 6722 Query 8821 GCAACACCATCAACCTGACGCGTCAGGCGATCATCAACGACGACCTGGGTGCGTTCCTCG 8880 |||||| |||||||||| | || ||||||||| |||| |||||| ||| | |||| || Sbjct 6721 GCAACATCATCAACCTGTCTCGGCAGGCGATCGTCAATGACGACATGGAGGTGTTCTCCG 6662 Query 8881 GCTTGGCGACCGCCTTCGGTCGTGCCGCAAAGCGGACCATTGAGGCCGACGCGTATGCGT 8940 || | || || | |||| || || || |||| ||| || ||| ||||| | || Sbjct 6661 GCCTTGCCGTCGACCTCGGCCGCGCGGCCAAGCTGACGATCGAGATCGACGTTTTCGCCC 6602 Query 8941 TCCTCGCCAGCAATCCGAAGCTGGATTCCAACAAGACGCTGTTCCACGCCGACCACGGCA 9000 || || |||||| ||| | || || | | ||||||| |||||| ||||||| Sbjct 6601 TCATCAACAGCAACCCGCTGATGAATGATGGCGTGGCGCTGTTTGACGCCGCGCACGGCA 6542 Query 9001 ACAT--CCTG-GCGGCAGCGGTGCCGAGCGTCACCTCGGTCGACGCGATGCGCGTCCGGC 9057 || | || | |||| || | ||| ||| | || |||| ||||| ||||| ||| Sbjct 6541 ACCTTGCCGGCGCGGGCGCCGCCCCGTCTGTCGCGGCGTTCGATGCGATCCGCGT--GGC 6484 Query 9058 --TGGCCCAGCAGAAGGACGTGGGCGGGAATGATGTGCTGGATCTGTCGCCGGCACTCTG 9115 |||| ||||||||| | |||| || || || ||| | ||| | ||| | Sbjct 6483 AATGGCGTCGCAGAAGGATCTCAGCGGCAACGAATATCTCGATAT----CCGCCCCTCGG 6428 Query 9116 GCTCGGTCCGACCAAATAC----GGCAGTGCCGCGCGTGTCACCAACAAGGCCGAGTACG 9171 | | | | |||| | ||| | | ||| | | |||| || | |||||| Sbjct 6427 TCCTGCTGCTTCCAATCGCGCTGGGCGGCGGCGCCAGGATTCTCAACCAGAGCCAGTACG 6368 Query 9172 ACCCGGACGC--TGAAGGGAAGCTGCAGCGCCCGAACGCTGTGCAGGGTCTCTTCCGCGA 9229 | || ||||| |||| ||||| ||||| |||||| || || | ||| || Sbjct 6367 ATCCCGACGCCGTGAA--CAAGCTTCAGCGGCCGAACATCGTCGCCGGCATGTTCTCGGA 6310 Query 9230 CATCGTCGACACCGCGCGCAT--CAAGGACGACAAGTGGTACCTGTTCGCCGATCCGAAC 9287 |||||||||||| ||||| | || | || || | ||| ||||| || |||||| Sbjct 6309 CATCGTCGACACGCCGCGCTTGGCAGGCACCGCA--TACTACGCCTTCGCGGACCCGAAC 6252 Query 9288 GACTGTCCGGCCATCGAGGTCGCATTCCTTGATGGGATCACCGAACCCTTCCTGGACTAC 9347 | | ||||| |||||||| | ||||| | || | |||||| || ||| ||| | Sbjct 6251 GTCGCGCCGGCGATCGAGGTGGTGTTCCTCAACGGCAACACCGAGCCGTTCACCGACAGC 6192 Query 9348 GAGGAGGGGTTCACCGTCGACGGTGTGCGTTGGAAGGCACGCCTCGATTTCGGCATCGCC 9407 |||| || | ||| || || || ||||||| |||| ||| | |||| ||| | Sbjct 6191 CAGGACGGCTGGCGCGTGGATGGCGTCGAATGGAAGGTTCGCCACGACTACGGCGTCGGC 6132 Query 9408 GCCCTCGACTATCG--CGGCGT----GCAGCGCTGCGGCTGA 9443 || | ||| || |||||| ||||| | ||| |||| Sbjct 6131 GCGGTGAACTTCCGCTCGGCGTTCAAGCAGCCCGGCGCCTGA 6090 >seq1183 Length=3274 Score = 91.5 bits (100), Expect = 4e-14 Identities = 132/184 (72%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 29552 CCAAGGAGACATCCGGGTACAGGCCGATCGAAAGCAGCTTCTCCTTGCCGGCGATGCGGT 29611 ||||| ||| || || || | || | || ||| ||||||||||||| || | ||| | Sbjct 2207 CCAAGCTGACGTCGGGATAGGGCCCAAACGTCAGCCGCTTCTCCTTGCCCGCAAAGCGAT 2148 Query 29612 ACTTCCAGCGCCAGCTGCGCGCACCGGTCGGGGTGAGATAGAGGTACAGGCCGCCACCGT 29671 ||||||| ||||||||||| || || || || | |||||||| || ||| |||| Sbjct 2147 ACTTCCATCGCCAGCTGCGAAAGCCCGTTGGAGTCACGTAGAGGTAGAGCCCGAAGCCGT 2088 Query 29672 CGGTGATCTTCTGCGGTTTGTCGCTGGGCTTGGCGCGCCTGATGGCTGCG-TCGGTCAGA 29730 | | | ||| | |||||| ||| || ||| || || || ||| ||| |||||||| Sbjct 2087 CCGCCAGCTTGTACGGTTTTTCGGTGCCCTTCGCCTGCTTGCAGGC-GCGATCGGTCAGG 2029 Query 29731 GGCA 29734 |||| Sbjct 2028 GGCA 2025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128792633745512