Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_011589.1
Length=40287
Score E
Sequences producing significant alignments: (Bits) Value
seq535 239 1e-58
seq1183 91.5 4e-14
>seq535
Length=9462
Score = 239 bits (264), Expect = 1e-58
Identities = 590/882 (67%), Gaps = 31/882 (4%)
Strand=Plus/Minus
Query 8582 CAGTGACTTCCCGGTGCTGCTCGAAAGCACGATGCACAAGGCACTGCAGGCGGCCTACGC 8641
||| |||||||| |||||| |||||| | |||| ||| | || |||||||| |||||
Sbjct 6960 CAGCGACTTCCCCGTGCTGTTCGAAAACGCGATCCACCGCACGCTTCAGGCGGCGTACGC 6901
Query 8642 CGTTGCGCCGGACACCTGGTCCCGCTGGTGCGTCACCGGCACCGTCAGTGATTTCCGCGA 8701
| |||||||||| ||||| |||| |||| |||||||| || | || ||||||||
Sbjct 6900 CACCACGCCGGACACGTGGTCGCGCTTTTGCGGTACCGGCACGGTGACCGACTTCCGCGA 6841
Query 8702 GCATTCGCGCTACC-GCGTGGGCAGCATTGGCAACCTGGACAAGCTGACCGAGGCTGGCG 8760
|| ||||||| ||| || | | || || ||||| | | |||||| ||||
Sbjct 6840 TCACAGCCGCTACCTGCGCGGCTCGT-TCGGGGCGCTCGACAACGTCAACGAGGCCGGCG 6782
Query 8761 AGTTCAAGAACAAGAAGATCCCGGACGGCGAGAAGGCAACCATCACCGCTGGCACCAAGG 8820
|||||||||||||| |||||| ||| | ||||| | ||| ||| || ||||
Sbjct 6781 AGTTCAAGAACAAGCCGATCCCCGACTTGGCGAAGGAGAAGATCCGCGCGACGACGAAGG 6722
Query 8821 GCAACACCATCAACCTGACGCGTCAGGCGATCATCAACGACGACCTGGGTGCGTTCCTCG 8880
|||||| |||||||||| | || ||||||||| |||| |||||| ||| | |||| ||
Sbjct 6721 GCAACATCATCAACCTGTCTCGGCAGGCGATCGTCAATGACGACATGGAGGTGTTCTCCG 6662
Query 8881 GCTTGGCGACCGCCTTCGGTCGTGCCGCAAAGCGGACCATTGAGGCCGACGCGTATGCGT 8940
|| | || || | |||| || || || |||| ||| || ||| ||||| | ||
Sbjct 6661 GCCTTGCCGTCGACCTCGGCCGCGCGGCCAAGCTGACGATCGAGATCGACGTTTTCGCCC 6602
Query 8941 TCCTCGCCAGCAATCCGAAGCTGGATTCCAACAAGACGCTGTTCCACGCCGACCACGGCA 9000
|| || |||||| ||| | || || | | ||||||| |||||| |||||||
Sbjct 6601 TCATCAACAGCAACCCGCTGATGAATGATGGCGTGGCGCTGTTTGACGCCGCGCACGGCA 6542
Query 9001 ACAT--CCTG-GCGGCAGCGGTGCCGAGCGTCACCTCGGTCGACGCGATGCGCGTCCGGC 9057
|| | || | |||| || | ||| ||| | || |||| ||||| ||||| |||
Sbjct 6541 ACCTTGCCGGCGCGGGCGCCGCCCCGTCTGTCGCGGCGTTCGATGCGATCCGCGT--GGC 6484
Query 9058 --TGGCCCAGCAGAAGGACGTGGGCGGGAATGATGTGCTGGATCTGTCGCCGGCACTCTG 9115
|||| ||||||||| | |||| || || || ||| | ||| | ||| |
Sbjct 6483 AATGGCGTCGCAGAAGGATCTCAGCGGCAACGAATATCTCGATAT----CCGCCCCTCGG 6428
Query 9116 GCTCGGTCCGACCAAATAC----GGCAGTGCCGCGCGTGTCACCAACAAGGCCGAGTACG 9171
| | | | |||| | ||| | | ||| | | |||| || | ||||||
Sbjct 6427 TCCTGCTGCTTCCAATCGCGCTGGGCGGCGGCGCCAGGATTCTCAACCAGAGCCAGTACG 6368
Query 9172 ACCCGGACGC--TGAAGGGAAGCTGCAGCGCCCGAACGCTGTGCAGGGTCTCTTCCGCGA 9229
| || ||||| |||| ||||| ||||| |||||| || || | ||| ||
Sbjct 6367 ATCCCGACGCCGTGAA--CAAGCTTCAGCGGCCGAACATCGTCGCCGGCATGTTCTCGGA 6310
Query 9230 CATCGTCGACACCGCGCGCAT--CAAGGACGACAAGTGGTACCTGTTCGCCGATCCGAAC 9287
|||||||||||| ||||| | || | || || | ||| ||||| || ||||||
Sbjct 6309 CATCGTCGACACGCCGCGCTTGGCAGGCACCGCA--TACTACGCCTTCGCGGACCCGAAC 6252
Query 9288 GACTGTCCGGCCATCGAGGTCGCATTCCTTGATGGGATCACCGAACCCTTCCTGGACTAC 9347
| | ||||| |||||||| | ||||| | || | |||||| || ||| ||| |
Sbjct 6251 GTCGCGCCGGCGATCGAGGTGGTGTTCCTCAACGGCAACACCGAGCCGTTCACCGACAGC 6192
Query 9348 GAGGAGGGGTTCACCGTCGACGGTGTGCGTTGGAAGGCACGCCTCGATTTCGGCATCGCC 9407
|||| || | ||| || || || ||||||| |||| ||| | |||| ||| |
Sbjct 6191 CAGGACGGCTGGCGCGTGGATGGCGTCGAATGGAAGGTTCGCCACGACTACGGCGTCGGC 6132
Query 9408 GCCCTCGACTATCG--CGGCGT----GCAGCGCTGCGGCTGA 9443
|| | ||| || |||||| ||||| | ||| ||||
Sbjct 6131 GCGGTGAACTTCCGCTCGGCGTTCAAGCAGCCCGGCGCCTGA 6090
>seq1183
Length=3274
Score = 91.5 bits (100), Expect = 4e-14
Identities = 132/184 (72%), Gaps = 2/184 (1%)
Strand=Plus/Minus
Query 29552 CCAAGGAGACATCCGGGTACAGGCCGATCGAAAGCAGCTTCTCCTTGCCGGCGATGCGGT 29611
||||| ||| || || || | || | || ||| ||||||||||||| || | ||| |
Sbjct 2207 CCAAGCTGACGTCGGGATAGGGCCCAAACGTCAGCCGCTTCTCCTTGCCCGCAAAGCGAT 2148
Query 29612 ACTTCCAGCGCCAGCTGCGCGCACCGGTCGGGGTGAGATAGAGGTACAGGCCGCCACCGT 29671
||||||| ||||||||||| || || || || | |||||||| || ||| ||||
Sbjct 2147 ACTTCCATCGCCAGCTGCGAAAGCCCGTTGGAGTCACGTAGAGGTAGAGCCCGAAGCCGT 2088
Query 29672 CGGTGATCTTCTGCGGTTTGTCGCTGGGCTTGGCGCGCCTGATGGCTGCG-TCGGTCAGA 29730
| | | ||| | |||||| ||| || ||| || || || ||| ||| ||||||||
Sbjct 2087 CCGCCAGCTTGTACGGTTTTTCGGTGCCCTTCGCCTGCTTGCAGGC-GCGATCGGTCAGG 2029
Query 29731 GGCA 29734
||||
Sbjct 2028 GGCA 2025
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 128792633745512
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |