Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_013055.1
Length=39896
Score E
Sequences producing significant alignments: (Bits) Value
seq828 149 2e-31
seq1790 91.5 4e-14
seq2342 86.0 2e-12
>seq828
Length=10702
Score = 149 bits (164), Expect = 2e-31
Identities = 504/769 (66%), Gaps = 22/769 (3%)
Strand=Plus/Minus
Query 8374 ATCACCGGAACGCCGACCGGATTTGTCGACTTAGAC-GCGCGACTCGACGGTATGCATGG 8432
|||||||| ||| | ||| || |||| | ||| || ||| | ||| |||| ||
Sbjct 2284 ATCACCGGCGTGCCCAGCGGCTTCCACGACCTGGACCGCATGAC-CTCCGGCCTGCAGGG 2226
Query 8433 CGGTGAGTTGATTATCGTCGGCGGACGGCCGT-CGATGGGAAAGACCTCCCTCGCAATGA 8491
||| || | || ||| | ||||| | ||| | ||||||| |||||||| || || || |
Sbjct 2225 CGGCGACCTCATCATCCT-GGCGGCCCGCCCTTCGATGGGCAAGACCTCGCTGGCCATCA 2167
Query 8492 ATATCGCAGAGCATGTCGCCATCGTGTCGA--GATTGCCCGTCGGCGTCTTGTCGCTGGA 8549
| ||||| ||||| || ||| || ||| | ||||||||| ||| || || ||||
Sbjct 2166 ACATCGCCGAGCACGTGGCCCTCAA--CGAAGGCCTGCCCGTCGCCGTGTTCTCCATGGA 2109
Query 8550 AATGCCGACCGAACAGTTGACCATGCGCATGCTGGCGTCGACATC--CCGTATCAGCCAA 8607
|||| | ||| || | |||| || | | || |||| ||| ||| |||
Sbjct 2108 AATGGGCGCTTCGCAGCTGGCGGTGCGTATCGTCGGTTC--CATCGGCCGGATCGACCAG 2051
Query 8608 AACAGGCTGCGAACCGGTCGCCTCGAGGATGACGACTGGCCGCGCCTGACGCGTGGCGTC 8667
| | || || ||||| |||||| || ||||| |||||||||||||| | | |
Sbjct 2050 ACCCACCTTCGCACCGGGCGCCTCACCGACGACGAGTGGCCGCGCCTGACCGAAGCCATT 1991
Query 8668 GAGCTGATGGCCGACGCGCCCGTGCATATTCTCGATAGCTCCGCGATCACCCCGT-CGAA 8726
||| | || | || || |||| || ||| | | | | || | |||
Sbjct 1990 GAGAAGCTGCGCAACATTTCCCTGCACATCGACGAGACGCCAGGCCTGACGGTGAGCGAG 1931
Query 8727 ATTCAAGTCCGAGTTGCGGCGCTTGTATCGCGAATGCGGCCG---GCTCGGGATGATTGT 8783
| | | || | | ||| || || ||| | |||||| | ||| || |||| ||
Sbjct 1930 TTGCGCG-CCAACTCGCGCCGGCTGGTGCGCCAGTGCGGCGGCAAGCTGGGCCTGATCGT 1872
Query 8784 CGTTGACTACCTGCAGCTGATGTCGGGTGACGGCGGCG--GATCT--GAAATGCGGGCCA 8839
|| |||||||||||||| ||| | ||| | ||| || | || | || ||||
Sbjct 1871 GGTGGACTACCTGCAGCTCATGA-GCGTGTCCTCGGGCATGAGCGACGAGAACCGCGCCA 1813
Query 8840 CCGAGGTCGCCGAAATATCGCGCGCACTCAAACAAATTGCGAAGGAACTCGACGTTCCGA 8899
||| ||| | ||| || || || | || || | || |||||||| | | |||
Sbjct 1812 CCGCGGTGGGCGAGATCTCCCGTGGCCTGAAGGCGCTGGCCAAGGAACTGGGCTGCCCGG 1753
Query 8900 TCATCGCGCTGTCGCAGCTTAATCGAGGGCTCGAGAATCGCCCAAACAAGCGGCCCGTCA 8959
| ||||||||||||||||| || || | ||| ||| | ||||||| || | |
Sbjct 1752 TGATCGCGCTGTCGCAGCTGTCACGCGGCGTGGAGTCGCGCACCGACAAGCGCCCGATGA 1693
Query 8960 TGTCCGATCTGCGCGAGTCGGGTGCGATCGAGCAGGATGCCGACGTGATCCTCTTTATCT 9019
|| ||| |||||||| ||||| || ||||||||||| |||||||| ||| | || ||||
Sbjct 1692 TGAGCGACCTGCGCGAATCGGGCGCCATCGAGCAGGACGCCGACGTCATCATGTTCATCT 1633
Query 9020 ACCGCGATGAGGTCTATAACCCCGACAGCGCAGATCGCGGTACGGCCGAAATCATCATTG 9079
||||||| || ||| ||| ||| | || | ||| |||||| | |||||
Sbjct 1632 ACCGCGACGACTACTACAACAAGGACTCCAAGGAGCCCGGCGTGGCCGAGGTGATCATCA 1573
Query 9080 CGAAGCAGCGAAACGGGCCGATTGGCACCGTACGGCTCGCATTCCAGAA 9128
|||||||| || || || | || ||||| ||| || |||| |||
Sbjct 1572 GCAAGCAGCGGAATGGCCCCACCGGGACCGTCAAGCTGGCCTTCCTGAA 1524
>seq1790
Length=1858
Score = 91.5 bits (100), Expect = 4e-14
Identities = 122/170 (72%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 38064 GTCGCGGGCATCTGGCGTGCGTGGCGTGGCGCCGACGGTGTCGAGACGCTCGCGATGGCG 38123
||||| ||||||||||| ||||||| ||||||| |||| ||| | ||
Sbjct 1366 GTCGCCGGCATCTGGCGCCCGTGGCGCCATCCCGACGGCCGCGAGGTCCTCAGCTTCGCC 1425
Query 38124 ATGCTGACGGTGAACGCCGACGAGCACCCGGTGATGAAGCACATGCACCGCCTCGGCGAC 38183
||||| || |||||||| ||||| || ||| ||||||||| | | || || | || |||
Sbjct 1426 ATGCTCACCGTGAACGCGGACGACCATCCGCTGATGAAGCGCTTCCATCGGCCCGAGGAC 1485
Query 38184 GAGAAGCGATCGGTCGTGATCCTGCGTCCGGCCGACTATGACGAGTGGCT 38233
|||||||| ||| |||||||| ||| | ||||| | | | |||||
Sbjct 1486 GAGAAGCGGATGGTGGTGATCCTCGATCCCGAGGACTACGGCAACTGGCT 1535
>seq2342
Length=2742
Score = 86.0 bits (94), Expect = 2e-12
Identities = 135/191 (71%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 35458 GGTCGAGGTGATCAACGACGTTAACGGCGAACTGATCAACCTGTATCGCGTCGTTCAGCA 35517
||||||||||||||||||| | ||||| | |||||||| ||||||||| | |
Sbjct 1326 GGTCGAGGTGATCAACGACCTGTCGGGCGACGTCGCCAACCTGTTTCGCGTCGTGCGCCG 1267
Query 35518 TCACCTCGAGGAATTCGTGCGGC-AGTTCAAATGGGCGCTCACCAGTCGGCAGGTGTTCG 35576
||| ||| ||||| || | |||||| ||| |||| || ||||| | | |||||
Sbjct 1266 GCACTATGAGCCGTTCGT-CGACGAGTTCACCTGGCTGCTCGCCGGTCGGGACGAGTTCG 1208
Query 35577 AGTGGCTGAAGCAGACGGCGCCGGAAACGCTCACCGACATCCAGCGTGCGGCGCGGTTCT 35636
|| | | ||||| || ||| ||||||||||| ||| |||| || | || |||
Sbjct 1207 AGCGACAGAAGCGCGTGGATCCGTCGACGCTCACCGATATCGAGCGCGCCGTCCGCTTCC 1148
Query 35637 ACTATCTGCAG 35647
||| ||||||
Sbjct 1147 TCTACCTGCAG 1137
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127541474218704
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |