Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq2528 185 1e-41 seq1574 86.0 8e-12 >seq2528 Length=594046 Score = 185 bits (204), Expect = 1e-41 Identities = 410/610 (67%), Gaps = 9/610 (1%) Strand=Plus/Minus Query 116668 TAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAG 116727 ||||| ||||||||||| || || | | || | | ||||||||||| || |||||| Sbjct 61461 TAGAGTGCCTCAAACTCGTCGCCGTAAACATCAGCCAACCCTGGTGCCTCATTGGGACAG 61402 Query 116728 AAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGC 116787 || | | ||| | || || ||||||||||||||| || | |||||| ||||||| Sbjct 61401 AACAAGGTCCAATCGCCGTTCTTCTCAACCCGCTTCATAAACAAATCTGGGGTCCAGAGA 61342 Query 116788 GCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAA 116847 || |||||||| ||| | |||| || | || || || ||| | |||||| Sbjct 61341 GCAAGAAAGAGATCACGAGCTCTCACTTCCTCTTTTCCGTGGTTTTTACGGAGATCCAAA 61282 Query 116848 AAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTG-CG--- 116903 || || | |||||| | |||||| ||||| || || | |||| | | ||| | || Sbjct 61281 AATTCGAAGATATCGGAGTGCCAGGGTTCAAGATAGATGGCGA-AGGCACCTGGTCGTTT 61223 Query 116904 ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGAT 116963 | ||| |||||| ||||| | || || ||| || || || ||||| || ||||| Sbjct 61222 ATTGCCACCCTGGTCAACATAGCGAGCAGTGTTGTTGAAGACACGGAGCATGGGGATGAT 61163 Query 116964 ACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTGG 117021 || | ||| ||||||||| || || || ||| | |||| | || | ||| Sbjct 61162 TCCGTTAGAGGAGCCATTTGTTCCTGCAATGTAGGAGCC--AGTGGCACGGATACGGTGT 61105 Query 117022 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCG 117081 | | | ||||||||| || || ||| || || |||| || |||| | || Sbjct 61104 ACATTAAGACCAATACCACCAGCTGTCTTGGAAATCAGTGCACAGGTTTTGAGCGTATCG 61045 Query 117082 TAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGC 117141 ||||| || ||||| || |||| | |||||||||| ||| | |||||||||| Sbjct 61044 TAGATACCTTCGATACTATCCTCCTTCATGTCGATGAGGAAACAGGATGCCATTTGTGGC 60985 Query 117142 CTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATC 117201 ||| || || |||||||| || || || | ||||| |||| | |||||||||| Sbjct 60984 TGTGGAGTTCCCGCGTTGAAAAGAGTGGGAGAAGCGTGAGTGAAGAATTTTTGGGACATC 60925 Query 117202 TTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGC 117261 || ||| || || | | |||||| || ||||||||||| | | |||||| Sbjct 60924 AAATTGTAAGTTTCAATCGCCTTCTCAATGTCCTCGCCGTGAATACCAACCGCAACCCGC 60865 Query 117262 ATAAACATGT 117271 |||| ||||| Sbjct 60864 ATAATCATGT 60855 >seq1574 Length=13039 Score = 86.0 bits (94), Expect = 8e-12 Identities = 275/425 (65%), Gaps = 4/425 (1%) Strand=Plus/Plus Query 12644 GTGGACACCCAAAATCTTCTCGCGTCCGCGCACACTGGGTAGGGACACGGTGATCTTACG 12703 |||||| || |||| |||||| ||||| | || || |||| || || || Sbjct 3772 GTGGACGTTCAGGATCTGCTCGCGGCCGCGGATGTCCGGCAGCTGCACGTAGACCTGGCG 3831 Query 12704 ATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGC 12763 || ||||| || ||||| || |||||| |||| ||||| || |||||| || || || Sbjct 3832 GTCGAAGCGGCCGGGGCGCAGCAGGGCGGCGTCCAGGATGTCCGGGCGGTTGGTGGCGGC 3891 Query 12764 GATGACAACGATGCCCGTCTCGTTATCGAAGCCATCCATCTCAGTCAAGAGTTGATTGAT 12823 | || | | |||| | | | |||||||| |||||||| || | || |||| Sbjct 3892 CACCACGATCACGCCCAGGTTGGTCTCGAAGCCGTCCATCTCGACCAGCATCTGGTTGAG 3951 Query 12824 GGTTTGTTCACGTTCATCATTCGCGGGCATACCA--CCCGCACTGCGTTGCTTACCGACG 12881 ||| || || || || || || || | ||| || || | || || ||||| Sbjct 3952 GGTCTGCTCGCGCTCGTCGTTGCCG--CCGCCCAGGCCGGCGCCACGCTGGCGGCCGACC 4009 Query 12882 GCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGCAACTTCAAAGATA 12941 ||||| || || || ||||| | ||| || || || | ||| || || || Sbjct 4010 GCGTCGATCTCATCGATGAAGATGATGCAGGGGGCGTTCTTCTTGGCGTTCTCGAACATG 4069 Query 12942 TCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCGGAACAT 13001 || ||||| | || ||||| || || ||||||||||| || | || | | || Sbjct 4070 TCGCGCACGCGGGCCGCGCCGACGCCGACGAACATCTCCACGAAGTCGGAGCCCGAGATG 4129 Query 13002 TGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTC 13061 || ||| || || |||| || || |||||| | ||| || || ||||| || ||| Sbjct 4130 CTGAAGAACGGCACCTTGGCCTCGCCGGCGATGCCCTTGGCCAGCAGCGTCTTGCCGGTC 4189 Query 13062 CCTGG 13066 || || Sbjct 4190 CCCGG 4194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613486310079840