Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq2528 185 1e-41
seq1574 86.0 8e-12
>seq2528
Length=594046
Score = 185 bits (204), Expect = 1e-41
Identities = 410/610 (67%), Gaps = 9/610 (1%)
Strand=Plus/Minus
Query 116668 TAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAG 116727
||||| ||||||||||| || || | | || | | ||||||||||| || ||||||
Sbjct 61461 TAGAGTGCCTCAAACTCGTCGCCGTAAACATCAGCCAACCCTGGTGCCTCATTGGGACAG 61402
Query 116728 AAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGC 116787
|| | | ||| | || || ||||||||||||||| || | |||||| |||||||
Sbjct 61401 AACAAGGTCCAATCGCCGTTCTTCTCAACCCGCTTCATAAACAAATCTGGGGTCCAGAGA 61342
Query 116788 GCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAA 116847
|| |||||||| ||| | |||| || | || || || ||| | ||||||
Sbjct 61341 GCAAGAAAGAGATCACGAGCTCTCACTTCCTCTTTTCCGTGGTTTTTACGGAGATCCAAA 61282
Query 116848 AAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTG-CG--- 116903
|| || | |||||| | |||||| ||||| || || | |||| | | ||| | ||
Sbjct 61281 AATTCGAAGATATCGGAGTGCCAGGGTTCAAGATAGATGGCGA-AGGCACCTGGTCGTTT 61223
Query 116904 ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGAT 116963
| ||| |||||| ||||| | || || ||| || || || ||||| || |||||
Sbjct 61222 ATTGCCACCCTGGTCAACATAGCGAGCAGTGTTGTTGAAGACACGGAGCATGGGGATGAT 61163
Query 116964 ACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTGG 117021
|| | ||| ||||||||| || || || ||| | |||| | || | |||
Sbjct 61162 TCCGTTAGAGGAGCCATTTGTTCCTGCAATGTAGGAGCC--AGTGGCACGGATACGGTGT 61105
Query 117022 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCG 117081
| | | ||||||||| || || ||| || || |||| || |||| | ||
Sbjct 61104 ACATTAAGACCAATACCACCAGCTGTCTTGGAAATCAGTGCACAGGTTTTGAGCGTATCG 61045
Query 117082 TAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGC 117141
||||| || ||||| || |||| | |||||||||| ||| | ||||||||||
Sbjct 61044 TAGATACCTTCGATACTATCCTCCTTCATGTCGATGAGGAAACAGGATGCCATTTGTGGC 60985
Query 117142 CTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATC 117201
||| || || |||||||| || || || | ||||| |||| | ||||||||||
Sbjct 60984 TGTGGAGTTCCCGCGTTGAAAAGAGTGGGAGAAGCGTGAGTGAAGAATTTTTGGGACATC 60925
Query 117202 TTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGC 117261
|| ||| || || | | |||||| || ||||||||||| | | ||||||
Sbjct 60924 AAATTGTAAGTTTCAATCGCCTTCTCAATGTCCTCGCCGTGAATACCAACCGCAACCCGC 60865
Query 117262 ATAAACATGT 117271
|||| |||||
Sbjct 60864 ATAATCATGT 60855
>seq1574
Length=13039
Score = 86.0 bits (94), Expect = 8e-12
Identities = 275/425 (65%), Gaps = 4/425 (1%)
Strand=Plus/Plus
Query 12644 GTGGACACCCAAAATCTTCTCGCGTCCGCGCACACTGGGTAGGGACACGGTGATCTTACG 12703
|||||| || |||| |||||| ||||| | || || |||| || || ||
Sbjct 3772 GTGGACGTTCAGGATCTGCTCGCGGCCGCGGATGTCCGGCAGCTGCACGTAGACCTGGCG 3831
Query 12704 ATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGC 12763
|| ||||| || ||||| || |||||| |||| ||||| || |||||| || || ||
Sbjct 3832 GTCGAAGCGGCCGGGGCGCAGCAGGGCGGCGTCCAGGATGTCCGGGCGGTTGGTGGCGGC 3891
Query 12764 GATGACAACGATGCCCGTCTCGTTATCGAAGCCATCCATCTCAGTCAAGAGTTGATTGAT 12823
| || | | |||| | | | |||||||| |||||||| || | || ||||
Sbjct 3892 CACCACGATCACGCCCAGGTTGGTCTCGAAGCCGTCCATCTCGACCAGCATCTGGTTGAG 3951
Query 12824 GGTTTGTTCACGTTCATCATTCGCGGGCATACCA--CCCGCACTGCGTTGCTTACCGACG 12881
||| || || || || || || || | ||| || || | || || |||||
Sbjct 3952 GGTCTGCTCGCGCTCGTCGTTGCCG--CCGCCCAGGCCGGCGCCACGCTGGCGGCCGACC 4009
Query 12882 GCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGCAACTTCAAAGATA 12941
||||| || || || ||||| | ||| || || || | ||| || || ||
Sbjct 4010 GCGTCGATCTCATCGATGAAGATGATGCAGGGGGCGTTCTTCTTGGCGTTCTCGAACATG 4069
Query 12942 TCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCGGAACAT 13001
|| ||||| | || ||||| || || ||||||||||| || | || | | ||
Sbjct 4070 TCGCGCACGCGGGCCGCGCCGACGCCGACGAACATCTCCACGAAGTCGGAGCCCGAGATG 4129
Query 13002 TGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTC 13061
|| ||| || || |||| || || |||||| | ||| || || ||||| || |||
Sbjct 4130 CTGAAGAACGGCACCTTGGCCTCGCCGGCGATGCCCTTGGCCAGCAGCGTCTTGCCGGTC 4189
Query 13062 CCTGG 13066
|| ||
Sbjct 4190 CCCGG 4194
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613486310079840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |