Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq2704 149 1e-30 seq2528 107 3e-18 >seq2704 Length=633058 Score = 149 bits (164), Expect = 1e-30 Identities = 335/499 (67%), Gaps = 11/499 (2%) Strand=Plus/Plus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 |||||| || ||||| ||||| || || || || |||||||| |||||||||| Sbjct 56170 CTTCTCAAAGAAGTTTGTCTTACCGGACAGCGAAATGTTGTCCATGAAGTCGAATGGGTT 56229 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 | || | | |||| |||| | || ||||| | ||||||||||| || ||||| || Sbjct 56230 CGTCGCATTATAGTACTTCTTATTACCAAGAGCGACAAGCAACCTGTCGGCGACAAACTC 56289 Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAG--CCTAACGGGGAGCGCTTCC 159826 |||||| ||||| | | |||| || || || || | || || || || || Sbjct 56290 GATGTATTGGCACATGAGTTTGGAGTTCATGCCGAGAAGGGCGCAA--GGAAGGGCATCG 56347 Query 159827 GACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACA-CGTTCGTA 159885 | || || || || || |||||||| ||||| || | || | ||| | | | Sbjct 56348 GTCAAGAATTCTTTTTCGATCTCGACAGCTTCTGTGATAACAGCCTCGACGGCCTGGGGG 56407 Query 159886 CCCCGGCT-TGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTC 159944 | | ||| || | || || | || || || || |||||||| ||| || | Sbjct 56408 CTCGGGCGGTGACGAAGGTGAGAG-----AAGAGAAGACAGGCAAAGTCAGTGTGGAGGC 56462 Query 159945 CCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTT 160004 ||||||| || || || | || ||||| | | ||||||| ||||| | |||||| | Sbjct 56463 CCTCGTCGCGGGAAATCAGTTCATTGGAGAAGGTGAGGCCAGGCATAAGGCCACGCTTCT 56522 Query 160005 TGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACG 160064 | ||||| || || | ||||||| || || |||||||| ||||| ||||| ||||| | Sbjct 56523 TCAGCCAGAAGATAGAGGCAAAAGAGCCACTGAAAAAGATACCCTCAACGGCTGCAAAGG 56582 Query 160065 CCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAG 160124 | || || | || |||||| | | ||| ||| |||| | ||||||| |||| Sbjct 56583 CAACAAGGCGCTGGGCAAAAGTTGATTCCTGGTCTTGGATCCATCGAATGGCCCAATCAG 56642 Query 160125 CCTTCTTTGCGATGCACGG 160143 ||||||| |||||| || Sbjct 56643 CCTTCTTACGGATGCAAGG 56661 >seq2528 Length=594046 Score = 107 bits (118), Expect = 3e-18 Identities = 161/225 (72%), Gaps = 3/225 (1%) Strand=Plus/Minus Query 203838 TCTTG-TCCACCGTGAACTGAAT-GGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACAT 203895 ||||| || || ||||| ||||| || | ||| | | | || ||| || |||||||| Sbjct 62668 TCTTGATCAACAGTGAATTGAATTGGAGCAGACG-CTGCCATGGTTCGGAGGTAGTACAT 62610 Query 203896 GCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTT 203955 ||||| || |||||| || ||| ||| | ||||||| | | ||||| || | | Sbjct 62609 CCCGGTTTTCAGGCCCAGCTTCCATCCGGCAAAGTGCATGCTGGTGATTTTGCCCATGGT 62550 Query 203956 GGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGC 204015 ||| || || ||| || |||||||| ||| ||||||||||| | | ||||| || Sbjct 62549 GGGCTCCTTCAAGTGGATATTCAGAGATTGGGACTGGTCGATGAATGCACCACGATCGGC 62490 Query 204016 GGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 ||||| | | |||||| |||| || || |||||||||||||| Sbjct 62489 AGCCATCTGAACAATGGTTCTCTGAGAGATTTCCCACACCGTCTT 62445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795128124965440