Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq934 125 8e-24 seq1640 107 2e-18 >seq934 Length=187681 Score = 125 bits (138), Expect = 8e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || |||||||| || |||||||| | || || ||||| || || ||||| Sbjct 9481 CTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCAAGCTGTTTACCAGCGAA 9422 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||||||| |||||||| | || | || |||||||||| |||||| |||| | | Sbjct 9421 GATCAAGCGTTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTAACATT 9362 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||| || || || || || || | ||||||||||||||||| || || || || Sbjct 9361 GTCGATCGTATCACTGGACTCAACCTCGAGAGTGATGGTTTTGCCCGTGAGAGTCTTCAC 9302 Query 46582 AAAGATTTGCAT 46593 || || ||||| Sbjct 9301 GAAAATCTGCAT 9290 Score = 93.3 bits (102), Expect = 5e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||| | ||| ||||||||| || |||||||| || || ||||| | || || Sbjct 10022 ACGAGATGTAGGGTAGACTCCTTTTGAATGTTGTAGTCTGAGAGTGTGCGACCATCTTCA 9963 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||||||||||||||| || | || |||||||| | || | | ||||||||| | Sbjct 9962 AGCTGCTTGCCGGCGAAAATTAGACGTTGCTGGTCTGGTGGAATTCCCTCCTTGTCTTGG 9903 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 || || | || | | | | |||||| ||||| || || | ||||| || || Sbjct 9902 ATTTTTGTTTTAACGTTATCGATCGTGTCTGAAGATTCAACTTCAAGTGTGATTGTCTTT 9843 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||| || || || || || ||||| Sbjct 9842 CCGGTCAAGGTCTTGACGAAAATCTGCAT 9814 Score = 86.0 bits (94), Expect = 7e-12 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| || || || || || || ||||| || |||| ||||||||||| |||||||| Sbjct 9776 TCCTTCTGAATGTTATAATCAGAGAGAGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAAG 9717 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| |||||||| || | || | || |||||||| |||||| | || | | Sbjct 9716 ATCAAACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCTTGGATCTTGGTTTTCACGTTA 9657 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | || || || ||||| || | |||||||| || || || || || || ||| Sbjct 9656 TCGATGGTATCCGAAGACTCCACTTCAAGAGTGATGGTCTTTCCGGTAAGAGTCTTGACA 9597 Query 46583 AAGATTTGCA 46592 | |||| || Sbjct 9596 ACTATTTTCA 9587 >seq1640 Length=153026 Score = 107 bits (118), Expect = 2e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| || ||||| || ||| | ||||| |||| ||||||||||| ||||| || | Sbjct 9682 CCTTCTGAATATTATAATCGCTCAAGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCAAAAA 9741 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 |||| ||||||||||| | || | || ||||||||| ||||| |||||| | Sbjct 9742 TCAAACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGAATCTTGCTCTTGACATTGT 9801 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | ||||||||||| ||||| || | ||||| || ||||| || || || || || | Sbjct 9802 CGATTGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTGACGA 9861 Query 46584 AG 46585 || Sbjct 9862 AG 9863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565219153632480