Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq934 104 2e-17 seq1954 84.2 2e-11 >seq934 Length=187681 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || |||||||||||||||||||| |||| || ||| ||| Sbjct 9290 ATGCAGATTTTCGTGAAGACTCTCACGGGCAAAACCATCACTCTCGAGGTTGAGTCCAGT 9349 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | |||| || |||| ||||| ||||| || || | ||||| Sbjct 9350 GATACGATCGACAATGTTAAGACCAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAG 9409 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || | || | ||| || |||||||| || || | ||||| ||| ||||||||| Sbjct 9410 CAACGCTTGATCTTCGCTGGTAAACAGCTTGAAGATGGCCGCACTCTCTCTGACTACAAC 9469 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 || || ||||| | || || || ||||| || || Sbjct 9470 ATTCAGAAGGAGTCAACCCTTCACTTGGTTCTTCG 9504 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || || || || ||||| | || || || | | Sbjct 9814 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACAATCACACTTGAAGTTGAATCTTCA 9873 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| ||||| |||||||| ||||| ||||||||||| | ||||| Sbjct 9874 GACACGATCGATAACG-TTAAAACAAAAATCCAAGACAAGGAGGGAATTCCACCAGACCA 9932 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || || |||| ||| ||||| ||||| || || | ||||| ||| |||||||| Sbjct 9933 GCAACGTCTAATTTTCGCCGGCAAGCAGCTTGAAGATGGTCGCACACTCTCAGACTACAA 9992 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||| |||||||| | || || ||| | || || || Sbjct 9993 CATTCAAAAGGAGTCTACCCTACATCTCGTCCTTCG 10028 Score = 96.9 bits (106), Expect = 3e-15 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||||||||| || || || | || ||||| || || || | || ||||| || | Sbjct 10042 ATGCAAATATTTGTGAAGACATTGACCGGCAAGACTATTACGTTAGAGGTCGAATCCTCA 10101 Query 38304 GACAGCGT-GCAAACGCTTAAAGA-AAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | |||| | |||| |||||||| || || ||||| || || | |||| Sbjct 10102 GACACAATCGACAACG--TGAAGACAAAAATCCAAGATAAGGAGGGTATCCCACCAGACC 10159 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 |||| || ||||||| || || || || || || || | ||||| || |||||| | Sbjct 10160 AACAACGTCTCATTTTTGCTGGTAAGCAACTTGAAGATGGCCGCACGCTTTCCGACTATA 10219 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGT 38452 ||||||| |||||| ||| |||| ||||| Sbjct 10220 ACATCCAGAAGGAAAGTACGTTGCACTTGGT 10250 >seq1954 Length=527115 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 38331 ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAG 38390 |||| ||||| ||||| || ||| | ||||| || || ||||| | ||| ||||||||| Sbjct 282590 ATCCCAGACAAGGAGGGCATCCCCCCTGACCAGCAACGTCTCATCTTCGCTGGCAAACAG 282649 Query 38391 CTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA 38434 || || |||| |||||||| || ||||||||||| ||||| Sbjct 282650 CTCGAGGACGGCCGCACCCTTTCGGATTACAACATCCAGAAGGA 282693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500155769116160