Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq2004 138 9e-27 seq2645 95.1 9e-14 >seq2004 Length=401351 Score = 138 bits (152), Expect = 9e-27 Identities = 686/1075 (64%), Gaps = 23/1075 (2%) Strand=Plus/Plus Query 517586 ACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTT 517645 |||||| |||| || || | |||||||| || |||||||| |||||||| || | || Sbjct 15488 ACAAGA-TAGCAGCCTGGACGGCAGCACCGTAGGCAACAGCCTCATCAGGGTTGATAGAC 15546 Query 517646 TCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT-ACCTTAGGAATACG 517704 | || | | || || |||||||| | |||| | | ||| | ||| |||||||| Sbjct 15547 TTGTTGGGCTCCTTGCCGTTGAAAAAGTCGGAAACCATCT-TCTGGATCTTGGGAATACG 15605 Query 517705 AGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAA 517764 | || || || || || || |||||||| || ||||| || | || | ||| Sbjct 15606 GGTAGAACCACCGACCAAGACGATTTCATGGACGGAGGATTTGTCGATCTTGGCATCGCG 15665 Query 517765 TAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAA 517824 | || || ||||| || | | | || | || || ||||||||||| Sbjct 15666 GAGGACACGCTCGACGGGCTCCATGGTGGAACGGAAAAGATCCTGGCAGAGTTCTTCGAA 15725 Query 517825 TTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCA 517882 ||| | || || || | || || ||||| || ||||| | ||| || | ||| Sbjct 15726 ACGAGCACGGGT--GATGGAGGTGTAGAAGTCAATACCCTCGAAGAGAGAGTCGATCTCA 15783 Query 517883 ATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGT 517942 || | || || | | ||| || || | || || ||||| || || || || | || Sbjct 15784 ATAGAGGTCTGGGCAGCAGAGGAGAGGGTGCGCTTGGCACGCTCGCAAGCGGTGCGGAGA 15843 Query 517943 CTTCGTAAGGCTTTTGCTGATTGATTCAAA--TCTGTTTTATATTTTCTCTTGAAATCTT 518000 | || | || || |||| | | | || | || | || | |||||| || | Sbjct 15844 CGACGGAGAGCACGAGC--ATTGGTAGAGAGATCCTTCTTGTGCTTGCGCTTGAACTCGT 15901 Query 518001 CAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTG 518060 ||| | | |||||||| || || || || ||||| ||||| | ||| | || | Sbjct 15902 TGACAAAGTGGTTCACAAGACGGTTGTCGAAGTCCTCACCACCCAAGTGAGTGTCACCAG 15961 Query 518061 ACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTC 518120 |||| | || | || | || ||||||| | ||| || | ||||| ||| | Sbjct 15962 CAGTAGACTTGACCTCAAAGATACCCTCTTCAATGGTCAAGAGGGAGACATCGAAGGTAC 16021 Query 518121 CACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCAT 518180 |||| |||| || ||||| | || || ||| || || || ||||| |||| Sbjct 16022 CACCGCCCAAGTCGAAAATCAAGACGTTACGTTCGCCCTCAGTCTTCTTGTCAAGGCCAT 16081 Query 518181 ACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTC 518240 | |||| || |||||||| || || || || || | | ||| |||||||| ||||| Sbjct 16082 AGGCAATGGCGGCAGCAGTAGGCTCGTTGATGATACGGAGAACGTTAAGACCGGCAATGA 16141 Query 518241 TTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAA 518300 || ||||| || || ||||| | || || ||||| || || ||||||||||| | | Sbjct 16142 GACCGGCATCCTTGGTAGCTTGACGCTGGGAGTCGTTGAAGTAGGCAGGAACAGTCACGA 16201 Query 518301 CGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAA 518360 |||||| | || | ||||| || | || |||| | |||| || | || | Sbjct 16202 CGGCATTGTTAACAGTTCCACCAAGGTAGGACTCGGCAGTTTCTCTCATCTTGGTCAAGA 16261 Query 518361 TCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTC-ATTTTGATATGATACTTCA 518419 ||| || || |||| || || | | ||||||| || |||| | | |||| Sbjct 16262 CCATGGAGGAGATTTCCTCAGGAGTGAACTGCTTGGTCTCGCCCTTGAAGTCA-ACTT-G 16319 Query 518420 AAATATGGTTTATTACCAACATT---AATAACTTTAAATGGCCAGTATTTCATATCTGAT 518476 | |||| || || | || |||| || || || | | |||||||| | | Sbjct 16320 GATGATGG--GCTTGCCGCCCTTGTCGATAATCTTGAAAGGGAAATGCTTCATATCGGCT 16377 Query 518477 TGAACACTTTGG--TCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTAT 518534 || |||| | || ||||| | | ||| || | || || || || || | |||| Sbjct 16378 TG--GACTTCAGCATCGTTAAACTTGCGACCGATGAGACGCTTGGCGTCGAAGACGGTAT 16435 Query 518535 TGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTG 518594 |||| || || || || |||||| || || |||||||| |||||| |||| || || | Sbjct 16436 TGGTGGGGTTCATGGCGACTTGATTCTTAGCAGCATCTCCGATCAGACGTTCGGTATCAG 16495 Query 518595 TAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTC 518649 | || | || | || || || ||||| || || || || || ||||| ||||| Sbjct 16496 TGAAGGCGACGAAGGAGGGGGTAGTGCGGTTTCCCTGGTCGTTGGCAATGATTTC 16550 >seq2645 Length=154107 Score = 95.1 bits (104), Expect = 9e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 671660 GAATTTTTCTTCCAAGTAATGGCAGGTCGTGAAGGTATTATTAATACGGCTATTAAAACT 671719 || ||||||||||| | ||||| |||||||| ||| ||||| | || || | || ||| Sbjct 68116 GAGTTTTTCTTCCACGCTATGGCTGGTCGTGAGGGTCTTATTGACACTGCCGTCAAGACT 68175 Query 671720 GCTGATACTGGTTATATTCAAAGAAAACTTGTTAAAATGCTCGAAGA 671766 ||||| || ||||| ||||||||||| ||||||||| || ||||| Sbjct 68176 GCTGAAACCGGTTACATTCAAAGAAAGCTTGTTAAAGCTCTTGAAGA 68222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780687226147144