Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2004 461 1e-124 seq1686 158 2e-33 seq2528 152 7e-32 seq2281 125 9e-24 seq2192 96.9 4e-15 >seq2004 Length=401351 Score = 461 bits (510), Expect = 1e-124 Identities = 1059/1584 (67%), Gaps = 17/1584 (1%) Strand=Plus/Plus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 |||||||| | || ||||| || || || | ||| || || ||||| || || Sbjct 15037 TCATCTTCGGCCTTGTACTTCTCAGCTTCAGCAAGCATGCGCTCGATCTCTTCCTTGGAG 15096 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | | ||||| || || || || |||||| | || || || | |||| || Sbjct 15097 AGACGGCCCTTGTCGTTGGTGATGACAATCTTGTTGGTCTTGCCAGTACCCTTCTCGAGG 15156 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 ||| ||||||| ||||| || ||||| |||||||| | || | ||||| || | Sbjct 15157 GCAGAAACATTCATGATACCGTTGGCATCGACATCGAAGGTAACCTCGATTTGAGGAACA 15216 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || | || || | ||||| || || | || || | || || | | |||| ||| | Sbjct 15217 CCACGTGGGGCAGGAGGAATGCCGGTAAGTTCGAACTTGCCGAGCAGATTGTTGTCCTTG 15276 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | ||||||||| |||||||| | ||| || | || || || || Sbjct 15277 GTGCGAGCACGTTCACCCTCATAGACCTGAATCAAAACACCGGGCTGGTTGTCGGAGAAG 15336 Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || |||||| | | ||||| | ||| || || || || | || | || ||| Sbjct 15337 GTAGAGAAGGTCTCGGACTTCTTGGTTGGGATGGTAGTGTTACGTTTGATGAGAGGAGTC 15396 Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988 || | |||||| ||| |||| || | || ||||| | ||||| | || | | Sbjct 15397 ATGACACCACCAGCAGTCTCGATACCCAAGGAGAGAGGGGCAACGTCGAGAAGGAGGATC 15456 Query 6989 TCTTGAACAGATTCGTTCCCT---TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045 || | | ||| | | ||||| | ||||| || || ||||| | || ||| Sbjct 15457 TCGTTAGTAGACTTGGAAGAGGTGTCACCGGACAAGATAGCAGCCTGGACGGCAGCACCG 15516 Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105 || || || |||||||| ||||| || | || || | || || ||||| ||| | || Sbjct 15517 TAGGCAACAGCCTCATCAGGGTTGATAGACTTGTTGGGCTCCTTGCCGTTGAAAAAGTCG 15576 Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165 || | ||| | || || || || || || || || ||||||||||| |||||||||| Sbjct 15577 GAAACCATCTTCTGGATCTTGGGAATACGGGTAGAACCACCGACCAAGACGATTTCATGG 15636 Query 7166 ACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA 7225 || ||||| |||||||| | || || || ||||| || ||||| | Sbjct 15637 ACGGAGGATTTGTCGATCTTGGCATCGCGGAGGACACGCTCGACGGGCTCCATGGTGGAA 15696 Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285 ||||| | ||| || ||||| || ||||| |||||||| ||||| || ||||| ||| Sbjct 15697 CGGAAAAGATCCTGGCAGAGTTCTTCGAAACGAGCACGGGTGATGGAGGTGTAGAAGTCA 15756 Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGC 7345 | || ||| | | || || || ||||| | || || || | || || | || ||| Sbjct 15757 ATACCCTCGAAGAGAGAGTCGATCTCAATAGAGGTCTGGGCAGCAGAGGAGAGGGTGCGC 15816 Query 7346 TTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCT 7405 || || ||||| || || || || | |||||| || ||||| | || || | ||| Sbjct 15817 TTGGCACGCTCGCAAGCGGTGCGGAGACGACGGAGAGCACGAGCATTGGTAGAGAGATCC 15876 Query 7406 TTCTTATGTTTACGTTTAAACTC-TTCAGAGAAGTG--TCGAAGGAGTCTCGAATCGAAA 7462 ||||| || || || || ||||| || | | ||||| || | || | | ||||| Sbjct 15877 TTCTTGTGCTTGCGCTTGAACTCGTTGACA-AAGTGGTTCACAAGACGGTTG--TCGAAG 15933 Query 7463 TCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCA 7522 || |||||||||||||| || || || || || | ||||| ||||||||||| ||||| Sbjct 15934 TCCTCACCACCCAAGTGAGTGTCACCAGCAGTAGACTTGACCTCAAAGATACCCTCTTCA 15993 Query 7523 ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT-CGT 7581 ||| | || | || ||||| || |||||||| |||| ||| ||||| | ||||| ||| Sbjct 15994 ATGGTCAAGAGGGAGACATCGAAGGTACCACCGCCCAAGTCGAAAATCAAGACGTTACGT 16053 Query 7582 ATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAAT 7641 ||| | || | ||||| || || || || || || || || || || || || || || Sbjct 16054 -TCGCCCTCAGTCTTCTTGTCAAGGCCATAGGCAATGGCGGCAGCAGTAGGCTCGTTGAT 16112 Query 7642 AATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGA 7701 ||||| ||| ||| || || ||||| | ||||| || || ||||| || || || Sbjct 16113 GATACGGAGAACGTTAAGACCGGCAATGAGACCGGCATCCTTGGTAGCTTGACGCTGGGA 16172 Query 7702 ATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGA 7761 ||||| |||||||| || || || ||||| || | | || | ||| || || || Sbjct 16173 GTCGTTGAAGTAGGCAGGAACAGTCACGACGGCATTGTTAACAGTTCCACCAAGGTAGGA 16232 Query 7762 TTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTG 7821 || || | ||| |||| ||||| | ||||| || || || || |||| | ||||| Sbjct 16233 CTCGGCAGTTTCTCTCATCTTGGTCAAGACCATGGAGGAGATTTCCTCAGGAGTGAACTG 16292 Query 7822 TTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAAC 7881 || || || || || || ||||||| || ||||| || |||| | | ||||| Sbjct 16293 CTTGGTCTCGCCCTTGAAGTCAACTTGGATGATGGGCTT-GCCGC--CCTTGTCGATAAT 16349 Query 7882 CTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGAT 7941 ||| | | ||| ||||||||| ||||||| | || |||||| | ||||| Sbjct 16350 CTTGAAAGGGAAATGCTTCATATCGGCTTGGACTTCAGCATCGTTAAACTTGCGACCGAT 16409 Query 7942 AAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGC 8001 |||||||| || || || || || || ||||||||||||| ||| ||||| || || Sbjct 16410 GAGACGCTTGGCGTCGAAGACGGTATTGGTGGGGTTCATGGCGACTTGATTCTTAGCAGC 16469 Query 8002 GTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATT 8061 || ||||| |||||||| || || || || |||||| | || ||||| || || || Sbjct 16470 ATCTCCGATCAGACGTTCGGTA---TCAGTGAAGGCGACGAAGGAGGGGGTAGTGCGGTT 16526 Query 8062 CCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATA 8121 || |||||||| ||||| ||||| | ||||| | | ||| || || || || || Sbjct 16527 TCCCTGGTCGTTGGCAATGATTTCGATCCGGTCATCACGGAAGATACCCACACAGGAGTA 16586 Query 8122 CGTTGTTCCTAAATCAATACCGAT 8145 || || |||||||||||||| || Sbjct 16587 TGTGGTACCTAAATCAATACCTAT 16610 >seq1686 Length=808478 Score = 158 bits (174), Expect = 2e-33 Identities = 362/541 (67%), Gaps = 7/541 (1%) Strand=Plus/Plus Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 || ||||| ||||| |||||||| || || |||||| | |||||| | | ||| Sbjct 275828 AGCTCCTCGAAACGAGCACGGGTGATCATGGTGCTGAAATCTTCACCGTCGAAAAGAGAA 275887 Query 7304 TCAATTTCAATGGTTGTTTG--TGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361 || || ||||| || || || || | | | || | || ||||| |||||||| || | Sbjct 275888 TCGATCTCAATCGTGGTCTGGGTGGCATTG--GAAAGGGTCCGCTTGGCGCGCTCGCAAG 275945 Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTT 7421 | ||||| | |||||| ||||| | | | || || | ||| ||||| || || | Sbjct 275946 CGGTTCGGAGACGACGGAGGGCTCTGGCATCCCCAGACAGATCCTTCTTGGTCTTTCGCT 276005 Query 7422 TAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTG 7481 ||||||| ||| || |||||| | | ||| || || | ||||| | || | Sbjct 276006 GGAACTCTTTCTTGAAATGATCAAGGAGGTTGGTATCAAAGTCCTGGCCACCAAGATGGG 276065 Query 7482 TATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACAT 7541 |||| || || || || ||||| |||| ||| || | ||||| | | ||||||| Sbjct 276066 TATCACCAGCAGTAGCCTTGACAGTGAAGACACCGCCCTGGATGTTGAGGAGAGAAACAT 276125 Query 7542 CAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTC--TTTGTTCTT 7599 |||| ||||||||||||| || | || || || || || | ||| | | | Sbjct 276126 CAAAAGTACCACCACCCAAATCGTAGATAAGAACATTGCGCTCCTTGTCAGACTTTCCGG 276185 Query 7600 A-TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCA 7658 | | | ||||| || || || || || || || || ||||| ||||| ||| ||||| Sbjct 276186 AGCCCAAGCCGTAGGCAATGGCAGCGGCAGTAGGCTCGTTAATGATACGGAGAACGTTCA 276245 Query 7659 GGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCG 7718 |||||||| | |||||||||| || ||||| || || ||||| ||||| |||| Sbjct 276246 ATCCAGCAATGGCACCCGCATCTTTGGTGGCTTGACGCTGGTTGTCGTTGAAGTAAGCCG 276305 Query 7719 GGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCA 7778 | || || | ||| || | | ||| |||| || || | | || || | ||||||| Sbjct 276306 GCACGGTAATGACAGCCTTGGAGACCTTCTGTCCAAGCTTGGTCTCGGCAACTTCTTTCA 276365 Query 7779 T 7779 | Sbjct 276366 T 276366 >seq2528 Length=594046 Score = 152 bits (168), Expect = 7e-32 Identities = 393/593 (66%), Gaps = 7/593 (1%) Strand=Plus/Minus Query 105484 TCAAACTCTTTACCGTACACGTCTGAAAGACCCTT-TGCCTGATCAGGACAAAACAATGA 105542 |||||||| | ||||| || || | | ||||| ||||| || ||||| ||||| | Sbjct 61452 TCAAACTCGTCGCCGTAAACATCAGCCA-ACCCTGGTGCCTCATTGGGACAGAACAAGGT 61394 Query 105543 CCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAA 105602 ||||| || | ||||| || ||||| ||||||||||| |||| | || ||| Sbjct 61393 CCAATCGCCGTTCTTCTCAACCCGCTTCATAAACAAATCTGGGGTCCAGAGAGCAAGAAA 61334 Query 105603 GAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAG 105662 ||| || ||| ||| | || || | || || || ||| | || | ||| |||| Sbjct 61333 GAGATCACGAGCTCTCACTTCCTCTTTTCCGTGGTTTTTACGGAGATCCAAAAATTCGAA 61274 Query 105663 AATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGACCCTTTACG---ACGCCCCGC 105719 ||||||| |||||| ||||| | ||||| || | | ||| || | || | Sbjct 61273 GATATCGGAGTGCCAGGGTTCAAGATAGATGGCGAAGGCACCTGGTCGTTTATTGCCACC 61214 Query 105720 TTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGA 105779 || | ||||| | || || ||| | || || | ||| || || || || | || Sbjct 61213 CTGGTCAACATAGCGAGCAGTGTTGTTGAAGACACGGAGCATGGGGATGATTCCGTTAGA 61154 Query 105780 TGTTCCATTTGTTCCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCC 105839 | ||||||||||| ||| | || | | ||||| | | ||| || | | || Sbjct 61153 GGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTGGCACGGATACGGTGTACATTAAGACC 61094 Query 105840 AATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTC 105899 |||||| ||||| ||| || | ||||| ||| | |||||||| ||||| || Sbjct 61093 AATACCACCAGCTGTCTTGGAAATCAGTGCACAGGTTTTGAGCGTATCGTAGATACCTTC 61034 Query 105900 GATACTATCTTCCTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTG-GGTGTAC 105958 ||||||||| ||||| | | || |||||||| |||| ||||||||| ||| || || | Sbjct 61033 GATACTATCCTCCTTCATGTCGATGAGGAAACAGGATGCCATTTGTGG-CTGTGGAGTTC 60975 Query 105959 CAGCATTGAACAGAGTTGGTGTTGCATGAATGAACAAACCTTTCGATAACGCTTCGTATG 106018 | || ||||| ||||| || | || ||| |||| || || || | | | ||| | Sbjct 60974 CCGCGTTGAAAAGAGTGGGAGAAGCGTGAGTGAAGAATTTTTGGGACATCAAATTGTAAG 60915 Query 106019 TTTCCAGGACGTGATCAATATCGTGTCCATGAATACCAATAGCGACGCGCATA 106071 |||| | | | ||||| || | || |||||||||| || || |||||| Sbjct 60914 TTTCAATCGCCTTCTCAATGTCCTCGCCGTGAATACCAACCGCAACCCGCATA 60862 >seq2281 Length=779450 Score = 125 bits (138), Expect = 9e-24 Identities = 249/358 (70%), Gaps = 13/358 (4%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTC-AAAGATACC 7515 || || || ||||||||||| || || || || ||||| || ||||| |||| || Sbjct 223099 TCAAAGTCCTCACCACCCAAATGGGTGTCACCAGCGGTAGCCAAAACTTCGAAAG---CC 223043 Query 7516 TCCT--TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGT 7573 | | ||||| | | |||||||| || ||||| ||||| ||||| | | || Sbjct 223042 CCGTTATCAATAGAGAGGACGGAAACATCGAAAGTACCGCCACCAAGGTCGTACACGATG 222983 Query 7574 ACGT-TCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 | | ||| ||||| | ||| |||||||| || || || ||||| || || || || Sbjct 222982 ATTTGACGT-TCGTCACC--AGTT-TTATCGAGTCCATAGGCAATAGCGGCGGCGGTAGG 222927 Query 7633 TTCATTAATAATACGAA-GACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691 || || | || ||||| |||| |||| || || || ||| |||||||||| || || | Sbjct 222926 CTCGTTGACAACACGAAGGACA-TTCAATCCGGCGATCGTTCCCGCATCTTTGGTGGCCT 222868 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751 ||| || |||||| |||||||| ||||| || || || |||| |||||| ||| | Sbjct 222867 GTCTCTGGTTATCGTTGAAGTAGGCTGGGACGGTAACAACGGCGTTAGTGACTGGCTTGC 222808 Query 7752 CGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 | || || || |||||||| ||||| ||| | ||||| | |||| ||||| Sbjct 222807 CAAGGTAACCCTCAGCGATATCCTTCATCTTGCCCAAGACCATAGCCGAAACTTCTTC 222750 >seq2192 Length=301127 Score = 96.9 bits (106), Expect = 4e-15 Identities = 197/288 (68%), Gaps = 6/288 (2%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| |||||||| | ||| ||||| || || | ||||| || || | || Sbjct 256102 ATCGAAATCCTCACCACCAAGGTGGGTATCGCCATTAGTGGACTTGACCTCGAAAACGCC 256161 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 || ||| | | | || | |||||| || |||||||| || || | | || | Sbjct 256162 CTTTTGAATCTCAAGAATGGAGATATCAAAAGTTCCACCACCAAGATCGTAGAC-AG--C 256218 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | | | || ||| | | ||| || |||||||| || | || || || || || || Sbjct 256219 GACCACA-CG--GTCCTGCTCCTTCTCAAGACCGTAGGCAAGGGCAGCAGCGGTGGGCTC 256275 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 |||| | |||||| ||| ||||||||||| | ||||| || || ||||| || Sbjct 256276 GTTAACGACACGAAGGACGTTGAGGCCAGCAATCTGACCAGCATCCTTGGTAGCTTGACG 256335 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGAC 7743 ||| |||||||| |||||||| ||||| || || || ||| | |||| Sbjct 256336 TTGAGAATCGTTGAAGTAGGCAGGGACTGTGACAACACCGTTCTTGAC 256383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635111173728160