Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq2004 461 1e-124
seq1686 158 2e-33
seq2528 152 7e-32
seq2281 125 9e-24
seq2192 96.9 4e-15
>seq2004
Length=401351
Score = 461 bits (510), Expect = 1e-124
Identities = 1059/1584 (67%), Gaps = 17/1584 (1%)
Strand=Plus/Plus
Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628
|||||||| | || ||||| || || || | ||| || || ||||| || ||
Sbjct 15037 TCATCTTCGGCCTTGTACTTCTCAGCTTCAGCAAGCATGCGCTCGATCTCTTCCTTGGAG 15096
Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688
| | ||||| || || || || |||||| | || || || | |||| ||
Sbjct 15097 AGACGGCCCTTGTCGTTGGTGATGACAATCTTGTTGGTCTTGCCAGTACCCTTCTCGAGG 15156
Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748
||| ||||||| ||||| || ||||| |||||||| | || | ||||| || |
Sbjct 15157 GCAGAAACATTCATGATACCGTTGGCATCGACATCGAAGGTAACCTCGATTTGAGGAACA 15216
Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808
|| | || || | ||||| || || | || || | || || | | |||| ||| |
Sbjct 15217 CCACGTGGGGCAGGAGGAATGCCGGTAAGTTCGAACTTGCCGAGCAGATTGTTGTCCTTG 15276
Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868
| ||||||||| |||||||| | ||| || | || || || ||
Sbjct 15277 GTGCGAGCACGTTCACCCTCATAGACCTGAATCAAAACACCGGGCTGGTTGTCGGAGAAG 15336
Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928
|| |||||| | | ||||| | ||| || || || || | || | || |||
Sbjct 15337 GTAGAGAAGGTCTCGGACTTCTTGGTTGGGATGGTAGTGTTACGTTTGATGAGAGGAGTC 15396
Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988
|| | |||||| ||| |||| || | || ||||| | ||||| | || | |
Sbjct 15397 ATGACACCACCAGCAGTCTCGATACCCAAGGAGAGAGGGGCAACGTCGAGAAGGAGGATC 15456
Query 6989 TCTTGAACAGATTCGTTCCCT---TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045
|| | | ||| | | ||||| | ||||| || || ||||| | || |||
Sbjct 15457 TCGTTAGTAGACTTGGAAGAGGTGTCACCGGACAAGATAGCAGCCTGGACGGCAGCACCG 15516
Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105
|| || || |||||||| ||||| || | || || | || || ||||| ||| | ||
Sbjct 15517 TAGGCAACAGCCTCATCAGGGTTGATAGACTTGTTGGGCTCCTTGCCGTTGAAAAAGTCG 15576
Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165
|| | ||| | || || || || || || || || ||||||||||| ||||||||||
Sbjct 15577 GAAACCATCTTCTGGATCTTGGGAATACGGGTAGAACCACCGACCAAGACGATTTCATGG 15636
Query 7166 ACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA 7225
|| ||||| |||||||| | || || || ||||| || ||||| |
Sbjct 15637 ACGGAGGATTTGTCGATCTTGGCATCGCGGAGGACACGCTCGACGGGCTCCATGGTGGAA 15696
Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285
||||| | ||| || ||||| || ||||| |||||||| ||||| || ||||| |||
Sbjct 15697 CGGAAAAGATCCTGGCAGAGTTCTTCGAAACGAGCACGGGTGATGGAGGTGTAGAAGTCA 15756
Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGC 7345
| || ||| | | || || || ||||| | || || || | || || | || |||
Sbjct 15757 ATACCCTCGAAGAGAGAGTCGATCTCAATAGAGGTCTGGGCAGCAGAGGAGAGGGTGCGC 15816
Query 7346 TTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCT 7405
|| || ||||| || || || || | |||||| || ||||| | || || | |||
Sbjct 15817 TTGGCACGCTCGCAAGCGGTGCGGAGACGACGGAGAGCACGAGCATTGGTAGAGAGATCC 15876
Query 7406 TTCTTATGTTTACGTTTAAACTC-TTCAGAGAAGTG--TCGAAGGAGTCTCGAATCGAAA 7462
||||| || || || || ||||| || | | ||||| || | || | | |||||
Sbjct 15877 TTCTTGTGCTTGCGCTTGAACTCGTTGACA-AAGTGGTTCACAAGACGGTTG--TCGAAG 15933
Query 7463 TCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCA 7522
|| |||||||||||||| || || || || || | ||||| ||||||||||| |||||
Sbjct 15934 TCCTCACCACCCAAGTGAGTGTCACCAGCAGTAGACTTGACCTCAAAGATACCCTCTTCA 15993
Query 7523 ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT-CGT 7581
||| | || | || ||||| || |||||||| |||| ||| ||||| | ||||| |||
Sbjct 15994 ATGGTCAAGAGGGAGACATCGAAGGTACCACCGCCCAAGTCGAAAATCAAGACGTTACGT 16053
Query 7582 ATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAAT 7641
||| | || | ||||| || || || || || || || || || || || || || ||
Sbjct 16054 -TCGCCCTCAGTCTTCTTGTCAAGGCCATAGGCAATGGCGGCAGCAGTAGGCTCGTTGAT 16112
Query 7642 AATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGA 7701
||||| ||| ||| || || ||||| | ||||| || || ||||| || || ||
Sbjct 16113 GATACGGAGAACGTTAAGACCGGCAATGAGACCGGCATCCTTGGTAGCTTGACGCTGGGA 16172
Query 7702 ATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGA 7761
||||| |||||||| || || || ||||| || | | || | ||| || || ||
Sbjct 16173 GTCGTTGAAGTAGGCAGGAACAGTCACGACGGCATTGTTAACAGTTCCACCAAGGTAGGA 16232
Query 7762 TTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTG 7821
|| || | ||| |||| ||||| | ||||| || || || || |||| | |||||
Sbjct 16233 CTCGGCAGTTTCTCTCATCTTGGTCAAGACCATGGAGGAGATTTCCTCAGGAGTGAACTG 16292
Query 7822 TTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAAC 7881
|| || || || || || ||||||| || ||||| || |||| | | |||||
Sbjct 16293 CTTGGTCTCGCCCTTGAAGTCAACTTGGATGATGGGCTT-GCCGC--CCTTGTCGATAAT 16349
Query 7882 CTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGAT 7941
||| | | ||| ||||||||| ||||||| | || |||||| | |||||
Sbjct 16350 CTTGAAAGGGAAATGCTTCATATCGGCTTGGACTTCAGCATCGTTAAACTTGCGACCGAT 16409
Query 7942 AAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGC 8001
|||||||| || || || || || || ||||||||||||| ||| ||||| || ||
Sbjct 16410 GAGACGCTTGGCGTCGAAGACGGTATTGGTGGGGTTCATGGCGACTTGATTCTTAGCAGC 16469
Query 8002 GTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATT 8061
|| ||||| |||||||| || || || || |||||| | || ||||| || || ||
Sbjct 16470 ATCTCCGATCAGACGTTCGGTA---TCAGTGAAGGCGACGAAGGAGGGGGTAGTGCGGTT 16526
Query 8062 CCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATA 8121
|| |||||||| ||||| ||||| | ||||| | | ||| || || || || ||
Sbjct 16527 TCCCTGGTCGTTGGCAATGATTTCGATCCGGTCATCACGGAAGATACCCACACAGGAGTA 16586
Query 8122 CGTTGTTCCTAAATCAATACCGAT 8145
|| || |||||||||||||| ||
Sbjct 16587 TGTGGTACCTAAATCAATACCTAT 16610
>seq1686
Length=808478
Score = 158 bits (174), Expect = 2e-33
Identities = 362/541 (67%), Gaps = 7/541 (1%)
Strand=Plus/Plus
Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303
|| ||||| ||||| |||||||| || || |||||| | |||||| | | |||
Sbjct 275828 AGCTCCTCGAAACGAGCACGGGTGATCATGGTGCTGAAATCTTCACCGTCGAAAAGAGAA 275887
Query 7304 TCAATTTCAATGGTTGTTTG--TGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361
|| || ||||| || || || || | | | || | || ||||| |||||||| || |
Sbjct 275888 TCGATCTCAATCGTGGTCTGGGTGGCATTG--GAAAGGGTCCGCTTGGCGCGCTCGCAAG 275945
Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTT 7421
| ||||| | |||||| ||||| | | | || || | ||| ||||| || || |
Sbjct 275946 CGGTTCGGAGACGACGGAGGGCTCTGGCATCCCCAGACAGATCCTTCTTGGTCTTTCGCT 276005
Query 7422 TAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTG 7481
||||||| ||| || |||||| | | ||| || || | ||||| | || |
Sbjct 276006 GGAACTCTTTCTTGAAATGATCAAGGAGGTTGGTATCAAAGTCCTGGCCACCAAGATGGG 276065
Query 7482 TATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACAT 7541
|||| || || || || ||||| |||| ||| || | ||||| | | |||||||
Sbjct 276066 TATCACCAGCAGTAGCCTTGACAGTGAAGACACCGCCCTGGATGTTGAGGAGAGAAACAT 276125
Query 7542 CAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTC--TTTGTTCTT 7599
|||| ||||||||||||| || | || || || || || | ||| | | |
Sbjct 276126 CAAAAGTACCACCACCCAAATCGTAGATAAGAACATTGCGCTCCTTGTCAGACTTTCCGG 276185
Query 7600 A-TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCA 7658
| | | ||||| || || || || || || || || ||||| ||||| ||| |||||
Sbjct 276186 AGCCCAAGCCGTAGGCAATGGCAGCGGCAGTAGGCTCGTTAATGATACGGAGAACGTTCA 276245
Query 7659 GGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCG 7718
|||||||| | |||||||||| || ||||| || || ||||| ||||| ||||
Sbjct 276246 ATCCAGCAATGGCACCCGCATCTTTGGTGGCTTGACGCTGGTTGTCGTTGAAGTAAGCCG 276305
Query 7719 GGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCA 7778
| || || | ||| || | | ||| |||| || || | | || || | |||||||
Sbjct 276306 GCACGGTAATGACAGCCTTGGAGACCTTCTGTCCAAGCTTGGTCTCGGCAACTTCTTTCA 276365
Query 7779 T 7779
|
Sbjct 276366 T 276366
>seq2528
Length=594046
Score = 152 bits (168), Expect = 7e-32
Identities = 393/593 (66%), Gaps = 7/593 (1%)
Strand=Plus/Minus
Query 105484 TCAAACTCTTTACCGTACACGTCTGAAAGACCCTT-TGCCTGATCAGGACAAAACAATGA 105542
|||||||| | ||||| || || | | ||||| ||||| || ||||| ||||| |
Sbjct 61452 TCAAACTCGTCGCCGTAAACATCAGCCA-ACCCTGGTGCCTCATTGGGACAGAACAAGGT 61394
Query 105543 CCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAA 105602
||||| || | ||||| || ||||| ||||||||||| |||| | || |||
Sbjct 61393 CCAATCGCCGTTCTTCTCAACCCGCTTCATAAACAAATCTGGGGTCCAGAGAGCAAGAAA 61334
Query 105603 GAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAG 105662
||| || ||| ||| | || || | || || || ||| | || | ||| ||||
Sbjct 61333 GAGATCACGAGCTCTCACTTCCTCTTTTCCGTGGTTTTTACGGAGATCCAAAAATTCGAA 61274
Query 105663 AATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGACCCTTTACG---ACGCCCCGC 105719
||||||| |||||| ||||| | ||||| || | | ||| || | || |
Sbjct 61273 GATATCGGAGTGCCAGGGTTCAAGATAGATGGCGAAGGCACCTGGTCGTTTATTGCCACC 61214
Query 105720 TTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGA 105779
|| | ||||| | || || ||| | || || | ||| || || || || | ||
Sbjct 61213 CTGGTCAACATAGCGAGCAGTGTTGTTGAAGACACGGAGCATGGGGATGATTCCGTTAGA 61154
Query 105780 TGTTCCATTTGTTCCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCC 105839
| ||||||||||| ||| | || | | ||||| | | ||| || | | ||
Sbjct 61153 GGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTGGCACGGATACGGTGTACATTAAGACC 61094
Query 105840 AATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTC 105899
|||||| ||||| ||| || | ||||| ||| | |||||||| ||||| ||
Sbjct 61093 AATACCACCAGCTGTCTTGGAAATCAGTGCACAGGTTTTGAGCGTATCGTAGATACCTTC 61034
Query 105900 GATACTATCTTCCTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTG-GGTGTAC 105958
||||||||| ||||| | | || |||||||| |||| ||||||||| ||| || || |
Sbjct 61033 GATACTATCCTCCTTCATGTCGATGAGGAAACAGGATGCCATTTGTGG-CTGTGGAGTTC 60975
Query 105959 CAGCATTGAACAGAGTTGGTGTTGCATGAATGAACAAACCTTTCGATAACGCTTCGTATG 106018
| || ||||| ||||| || | || ||| |||| || || || | | | ||| |
Sbjct 60974 CCGCGTTGAAAAGAGTGGGAGAAGCGTGAGTGAAGAATTTTTGGGACATCAAATTGTAAG 60915
Query 106019 TTTCCAGGACGTGATCAATATCGTGTCCATGAATACCAATAGCGACGCGCATA 106071
|||| | | | ||||| || | || |||||||||| || || ||||||
Sbjct 60914 TTTCAATCGCCTTCTCAATGTCCTCGCCGTGAATACCAACCGCAACCCGCATA 60862
>seq2281
Length=779450
Score = 125 bits (138), Expect = 9e-24
Identities = 249/358 (70%), Gaps = 13/358 (4%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTC-AAAGATACC 7515
|| || || ||||||||||| || || || || ||||| || ||||| |||| ||
Sbjct 223099 TCAAAGTCCTCACCACCCAAATGGGTGTCACCAGCGGTAGCCAAAACTTCGAAAG---CC 223043
Query 7516 TCCT--TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGT 7573
| | ||||| | | |||||||| || ||||| ||||| ||||| | | ||
Sbjct 223042 CCGTTATCAATAGAGAGGACGGAAACATCGAAAGTACCGCCACCAAGGTCGTACACGATG 222983
Query 7574 ACGT-TCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632
| | ||| ||||| | ||| |||||||| || || || ||||| || || || ||
Sbjct 222982 ATTTGACGT-TCGTCACC--AGTT-TTATCGAGTCCATAGGCAATAGCGGCGGCGGTAGG 222927
Query 7633 TTCATTAATAATACGAA-GACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691
|| || | || ||||| |||| |||| || || || ||| |||||||||| || || |
Sbjct 222926 CTCGTTGACAACACGAAGGACA-TTCAATCCGGCGATCGTTCCCGCATCTTTGGTGGCCT 222868
Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751
||| || |||||| |||||||| ||||| || || || |||| |||||| ||| |
Sbjct 222867 GTCTCTGGTTATCGTTGAAGTAGGCTGGGACGGTAACAACGGCGTTAGTGACTGGCTTGC 222808
Query 7752 CGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809
| || || || |||||||| ||||| ||| | ||||| | |||| |||||
Sbjct 222807 CAAGGTAACCCTCAGCGATATCCTTCATCTTGCCCAAGACCATAGCCGAAACTTCTTC 222750
>seq2192
Length=301127
Score = 96.9 bits (106), Expect = 4e-15
Identities = 197/288 (68%), Gaps = 6/288 (2%)
Strand=Plus/Plus
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
||||||||| |||||||| | ||| ||||| || || | ||||| || || | ||
Sbjct 256102 ATCGAAATCCTCACCACCAAGGTGGGTATCGCCATTAGTGGACTTGACCTCGAAAACGCC 256161
Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575
|| ||| | | | || | |||||| || |||||||| || || | | || |
Sbjct 256162 CTTTTGAATCTCAAGAATGGAGATATCAAAAGTTCCACCACCAAGATCGTAGAC-AG--C 256218
Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635
| | | || ||| | | ||| || |||||||| || | || || || || || ||
Sbjct 256219 GACCACA-CG--GTCCTGCTCCTTCTCAAGACCGTAGGCAAGGGCAGCAGCGGTGGGCTC 256275
Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695
|||| | |||||| ||| ||||||||||| | ||||| || || ||||| ||
Sbjct 256276 GTTAACGACACGAAGGACGTTGAGGCCAGCAATCTGACCAGCATCCTTGGTAGCTTGACG 256335
Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGAC 7743
||| |||||||| |||||||| ||||| || || || ||| | ||||
Sbjct 256336 TTGAGAATCGTTGAAGTAGGCAGGGACTGTGACAACACCGTTCTTGAC 256383
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635111173728160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |