Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2528 194 2e-44 seq1574 84.2 3e-11 seq1168 82.4 9e-11 >seq2528 Length=594046 Score = 194 bits (214), Expect = 2e-44 Identities = 464/696 (67%), Gaps = 7/696 (1%) Strand=Plus/Minus Query 110531 CCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTC-GCCTTGTCGGGACAGAAGAGG 110589 ||||||| || | ||||| ||||||| | ||||| |||| | ||||||||| | | Sbjct 61454 CCTCAAACTCGTCGCCGTAAACATCAGCCA-ACCCTGGTGCCTCATTGGGACAGAACAAG 61396 Query 110590 GACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAG 110649 | ||||| || || |||||||| |||||| |||| || || |||| | || || Sbjct 61395 GTCCAATCGCCGTTCTTCTCAACCCGCTTCATAAACAAATCTGGGGTCCAGAGAGCA-AG 61337 Query 110650 AAA-AGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTC 110708 ||| || ||||| | | || || | || ||||| || || |||||||| || Sbjct 61336 AAAGAGATCACGAGCTCTCACTTCCTCTTTTCCGTGGTTTTTACGGAGATCCAAAAATTC 61277 Query 110709 CATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACGACGA---CC 110765 | |||||| |||||||| ||||| ||||||| |||| || || || | || Sbjct 61276 GAAGATATCGGAGTGCCAGGGTTCAAGATAGATGGCGAAGGCACCTGGTCGTTTATTGCC 61217 Query 110766 CGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATC 110825 |||||| ||||||||| || ||| |||||||| | |||||| || || ||||| | Sbjct 61216 ACCCTGGTCAACATAGCGAGCAGTGTTGTTGAAGACACGGAGCATGGGGATGATTCCGTT 61157 Query 110826 GGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCAT 110885 || |||||||| || ||| ||| | ||||||| || ||| | || | Sbjct 61156 AGAGGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTGGCACGGATACGGTGTACATTAAG 61097 Query 110886 ACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACC 110945 |||||||||||| || ||| ||| ||||||| | |||| ||| | || ||||| Sbjct 61096 ACCAATACCACCAGCTGTCTTGGAAATCAGTGCACAGGTTTTGAGCGTATCGTAGATACC 61037 Query 110946 ATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGT 111005 || || ||| |||| || | || || || || || | ||| || || | || || Sbjct 61036 TTCGATACTATCCTCCTTCATGTCGATGAGGAAACAGGATGCCATTTGTGGCTGTGGAGT 60977 Query 111006 TCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGTTGTA 111065 |||||| ||||| || || || | || ||| |||| | |||||||||| ||||| Sbjct 60976 TCCCGCGTTGAAAAGAGTGGGAGAAGCGTGAGTGAAGAATTTTTGGGACATCAAATTGTA 60917 Query 111066 TGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACAT 111125 || || | || | || | ||||||||||||| ||||| ||||| | ||| Sbjct 60916 AGTTTCAATCGCCTTCTCAATGTCCTCGCCGTGAATACCAACCGCAACCCGCATAATCAT 60857 Query 111126 ATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTAACTCTTCTCTAGGGT 111185 | || || ||| | ||| |||| | ||| || ||| | |||||| || Sbjct 60856 GTGCTGCGGACGCTCGGCAACCTTGCCATTGATCCGCAACAGATAAGACCGCTCTAGTGT 60797 Query 111186 CTTGAGACCAAAGTATCCAAAATCGAAATCACGATC 111221 ||||| ||||| ||| | | ||||||||||| Sbjct 60796 CTTGAAGCCAAAATATTGGTAGTTAAAATCACGATC 60761 >seq1574 Length=13039 Score = 84.2 bits (92), Expect = 3e-11 Identities = 242/368 (66%), Gaps = 6/368 (2%) Strand=Plus/Plus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 || ||||| || || ||||| || || || | || || || || ||||| || ||| Sbjct 3830 CGGTCGAAGCGGCCGGGGCGCAGCAGGGCGGCGTCCAGGATGTCCGGGCGGTTGGTGGCG 3889 Query 11563 GCAATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTG 11622 || | || | | ||| | | ||||| |||||||| || || | ||||||| Sbjct 3890 GCCACCACGATCACGCCCAGGTTGGTCTCGAAGCCGTCCATCTCGACCAGCATCTGGTTG 3949 Query 11623 ATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCA--CCTGCCGAACGCTTCTTACCGA 11680 | ||||| || ||||| |||||| | | ||| || || ||||| |||| Sbjct 3950 AGGGTCTGCTCGCGCTCGTCGTTGCCG--CCGCCCAGGCCGGCGCCACGCTGGCGGCCGA 4007 Query 11681 CAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAA 11740 | ||||| |||||||||||||| | ||| || || ||| || | ||||| | Sbjct 4008 CCGCGTCGATCTCATCGATGAAGATGATGCAGGGGGCGTTCTTCTTGGCGTTCTCGAACA 4067 Query 11741 GTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAGA-A 11799 || || || || ||| || || || ||||||||||| ||||||| | | | || | Sbjct 4068 TGTCGCGCACGCGGGCCGCGCCGACGCCGACGAACATCTCCACGAAGTCGGAGCCCGAGA 4127 Query 11800 CACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCC 11859 ||||| ||| || || || | ||| || |||||| | || || || ||||| || Sbjct 4128 TGCTGAA-GAACGGCACCTTGGCCTCGCCGGCGATGCCCTTGGCCAGCAGCGTCTTGCCG 4186 Query 11860 GTACCAGG 11867 || || || Sbjct 4187 GTCCCCGG 4194 >seq1168 Length=122698 Score = 82.4 bits (90), Expect = 9e-11 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 |||||||||||||||||||||||||||| |||||||||||||| | |||||| || | Sbjct 43876 ATAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGAGAGTTCGACCCTCTC 43935 Query 136776 TGGGAACA 136783 ||||| || Sbjct 43936 TGGGACCA 43943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588955945367200