Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq2528 158 1e-33
seq2704 111 2e-19
>seq2528
Length=594046
Score = 158 bits (174), Expect = 1e-33
Identities = 697/1089 (64%), Gaps = 32/1089 (3%)
Strand=Plus/Minus
Query 105551 TCAAGACTGAACTGAATTGGGCGCGCCTTTGCCTTAGATCGGAGATAGTACATCCCGGTC 105610
|||| | |||| |||||||| | | |||| | | |||||| ||||||||||||||
Sbjct 62662 TCAACAGTGAATTGAATTGGAGCAGACGCTGCCATGGTTCGGAGGTAGTACATCCCGGTT 62603
Query 105611 TTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTT 105670
|| || || | ||||| || | ||||| | || ||| ||| || ||
Sbjct 62602 TTCAGGCCCAGCTTCCATCCGGCAAAGTGCATGCTGGTGATTTTGCCCATGGTGGGCTCC 62543
Query 105671 TCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCCATA 105730
| || | | ||||| | ||| |||||| ||||| |||||| | || |||||
Sbjct 62542 TTCAAGTGGATATTCAGAGATTGGGACTGGTCGATGAATGCACCACGATCGGCAGCCATC 62483
Query 105731 TCAATGACATCCTTCATCTT---GATTTCCCACACTGTGCGGTAGAGATTCTTGATATCA 105787
| || | | ||| ||| |||||||||||| || ||||| || |||||
Sbjct 62482 TGAACAA--TGGTTC-TCTGAGAGATTTCCCACACCGTCTTATAGAGTGCTTTAATATCC 62426
Query 105788 TCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCCTTGACCA-TGAGA---TCCTT 105843
| ||||||| | ||| || || || ||||| ||||| | || ||| | | |||
Sbjct 62425 GCAGGGATATTGGGGATGTTCTGGATCGAACC----GCCTTCAGCAATGATACGGTTCTT 62370
Query 105844 CATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAG--ATGCTTGTTGACA 105901
||||| | ||||| ||||| | | |||||| || | || ||| ||| ||
Sbjct 62369 CATATTGTCCGACCACAGACCGAGATCGACGAGATCTTTCAGAAGCCATGG--GTTAACG 62312
Query 105902 ATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAG 105961
| ||||| || || || | || ||||||||| | ||||| || |||||
Sbjct 62311 ACTTGGAACTCGCCTGCAAGAACCCGTCGAGAATAGATGTTTGATGTGTATGGCTCAAAA 62252
Query 105962 CATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGA 106021
||||| || || | ||| || |||| || |||||||| ||||| | | |||
Sbjct 62251 CATTCGTTGAATCCGAGGATCTGACTGGTGCTAGCAGTTGGCATAGGTGCAACGAGCAGA 62192
Query 106022 CTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA--GTTGA 106079
||||| || | ||| | || |||| | || || | ||||| || | | | |
Sbjct 62191 CTGTTGCGTACACCATGTTTGGCGATGTCCTTTTTCAGCGCGTCCCAATCCCAAAGGTCA 62132
Query 106080 GCTTGGTTTCACCTTCCCACATATCAAATTG--AAGCACCCCTTGGGACGTGGGAGAACC 106137
| |||| |||| |||| |||||||| | || ||| |||| || || ||||| ||
Sbjct 62131 G-TTGGCGTCACGTTCC-ACATATCATACTGCAAAGTACCC--TGAGATACAGGAGAGCC 62076
Query 106138 CTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGC 106197
|| | |||||||||| || | ||| || | || || ||| || | ||
Sbjct 62075 TTCGTAGGTCTCATAGGGCCCGTCAACTTTGGCGATATCGCAAGACGCGGTCAAAGCCGC 62016
Query 106198 GTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGC 106257
||||| || ||||||||||| || ||||| || ||| || || ||||||||||
Sbjct 62015 ATGATAAATTGTTTCAAAGATCTGAATATTCAACTGCTTAGCCTCGGGCGAATCAAATGG 61956
Query 106258 GTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTG 106317
| ||| | || || |||| || |||||||| || || | | ||||| | ||
Sbjct 61955 CAATCGGAGCGCAAGGAAAGCATCGGCAAGACCTTGGACGCCAACCGCGATAGGCCGATG 61896
Query 106318 TCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCG 106374
|| | |||| ||| || || ||| || ||||| || | ||||| | |
Sbjct 61895 ACGGAAATTACTCTTGCGGGCT---TCAGGGACAGGATAGTGGTTGTTATCAATAATTTT 61839
Query 106375 GTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCG 106434
||| ||||| | || || | || | |||||| | ||| || | ||| | ||
Sbjct 61838 GTTCAGATTGCGGACAAGAACTTGAGTAACTTCATGCAATTTGCCAAAGTCATACTCGCC 61779
Query 106435 AGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTC 106494
| | || || || | || | ||| | ||||||| |||||||| || ||
Sbjct 61778 ACGAACAGGATCAACGTATGTGGGCAAGGCAAGCGATGCCAGGTTGCAAACTGCAACTTC 61719
Query 106495 ATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAA 106554
||| | |||||||| | ||||| || || | ||| || || ||| || || |
Sbjct 61718 ATCTGGGGCGGTGTACTCGATGATTTCCGTGCAGAGGTTCGAGCTTCGAATAGTTCCAAG 61659
Query 106555 ATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGT 106614
|| || ||||| ||||| |||||||||||||||||| |||||| | || | |||||
Sbjct 61658 GTTTTTCTGGTTGCTCTTGCGGTTGCACGCATCCTTGTAAAGCATGAACGGGTTACCCGT 61599
Query 106615 CTCCGTCTG 106623
|||||||||
Sbjct 61598 CTCCGTCTG 61590
>seq2704
Length=633058
Score = 111 bits (122), Expect = 2e-19
Identities = 120/159 (75%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332
|||||| || |||||| ||||| || |||||||| |||||||| |||||| |||||
Sbjct 56443 GGCAAAGTCAGTGTGGAGGCCCTCGTCGCGGGAAATCAGTTCATTGGAGAAGGTGAGGCC 56502
Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392
||||| || || |||||||||| ||| | |||| | || || || ||| |||||
Sbjct 56503 AGGCATAAGGCCACGCTTCTTCAGCCAGAAGATAGAGGCAAAAGAGCCACTGAAAAAGAT 56562
Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAA 117431
|||||| || ||||| |||| |||||||| ||| ||
Sbjct 56563 ACCCTCAACGGCTGCAAAGGCAACAAGGCGCTGGGCAAA 56601
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589960711153760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |