Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq2528 158 1e-33 seq2704 111 2e-19 >seq2528 Length=594046 Score = 158 bits (174), Expect = 1e-33 Identities = 697/1089 (64%), Gaps = 32/1089 (3%) Strand=Plus/Minus Query 105551 TCAAGACTGAACTGAATTGGGCGCGCCTTTGCCTTAGATCGGAGATAGTACATCCCGGTC 105610 |||| | |||| |||||||| | | |||| | | |||||| |||||||||||||| Sbjct 62662 TCAACAGTGAATTGAATTGGAGCAGACGCTGCCATGGTTCGGAGGTAGTACATCCCGGTT 62603 Query 105611 TTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTT 105670 || || || | ||||| || | ||||| | || ||| ||| || || Sbjct 62602 TTCAGGCCCAGCTTCCATCCGGCAAAGTGCATGCTGGTGATTTTGCCCATGGTGGGCTCC 62543 Query 105671 TCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCCATA 105730 | || | | ||||| | ||| |||||| ||||| |||||| | || ||||| Sbjct 62542 TTCAAGTGGATATTCAGAGATTGGGACTGGTCGATGAATGCACCACGATCGGCAGCCATC 62483 Query 105731 TCAATGACATCCTTCATCTT---GATTTCCCACACTGTGCGGTAGAGATTCTTGATATCA 105787 | || | | ||| ||| |||||||||||| || ||||| || ||||| Sbjct 62482 TGAACAA--TGGTTC-TCTGAGAGATTTCCCACACCGTCTTATAGAGTGCTTTAATATCC 62426 Query 105788 TCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCCTTGACCA-TGAGA---TCCTT 105843 | ||||||| | ||| || || || ||||| ||||| | || ||| | | ||| Sbjct 62425 GCAGGGATATTGGGGATGTTCTGGATCGAACC----GCCTTCAGCAATGATACGGTTCTT 62370 Query 105844 CATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAG--ATGCTTGTTGACA 105901 ||||| | ||||| ||||| | | |||||| || | || ||| ||| || Sbjct 62369 CATATTGTCCGACCACAGACCGAGATCGACGAGATCTTTCAGAAGCCATGG--GTTAACG 62312 Query 105902 ATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAG 105961 | ||||| || || || | || ||||||||| | ||||| || ||||| Sbjct 62311 ACTTGGAACTCGCCTGCAAGAACCCGTCGAGAATAGATGTTTGATGTGTATGGCTCAAAA 62252 Query 105962 CATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGA 106021 ||||| || || | ||| || |||| || |||||||| ||||| | | ||| Sbjct 62251 CATTCGTTGAATCCGAGGATCTGACTGGTGCTAGCAGTTGGCATAGGTGCAACGAGCAGA 62192 Query 106022 CTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA--GTTGA 106079 ||||| || | ||| | || |||| | || || | ||||| || | | | | Sbjct 62191 CTGTTGCGTACACCATGTTTGGCGATGTCCTTTTTCAGCGCGTCCCAATCCCAAAGGTCA 62132 Query 106080 GCTTGGTTTCACCTTCCCACATATCAAATTG--AAGCACCCCTTGGGACGTGGGAGAACC 106137 | |||| |||| |||| |||||||| | || ||| |||| || || ||||| || Sbjct 62131 G-TTGGCGTCACGTTCC-ACATATCATACTGCAAAGTACCC--TGAGATACAGGAGAGCC 62076 Query 106138 CTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGC 106197 || | |||||||||| || | ||| || | || || ||| || | || Sbjct 62075 TTCGTAGGTCTCATAGGGCCCGTCAACTTTGGCGATATCGCAAGACGCGGTCAAAGCCGC 62016 Query 106198 GTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGC 106257 ||||| || ||||||||||| || ||||| || ||| || || |||||||||| Sbjct 62015 ATGATAAATTGTTTCAAAGATCTGAATATTCAACTGCTTAGCCTCGGGCGAATCAAATGG 61956 Query 106258 GTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTG 106317 | ||| | || || |||| || |||||||| || || | | ||||| | || Sbjct 61955 CAATCGGAGCGCAAGGAAAGCATCGGCAAGACCTTGGACGCCAACCGCGATAGGCCGATG 61896 Query 106318 TCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCG 106374 || | |||| ||| || || ||| || ||||| || | ||||| | | Sbjct 61895 ACGGAAATTACTCTTGCGGGCT---TCAGGGACAGGATAGTGGTTGTTATCAATAATTTT 61839 Query 106375 GTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCG 106434 ||| ||||| | || || | || | |||||| | ||| || | ||| | || Sbjct 61838 GTTCAGATTGCGGACAAGAACTTGAGTAACTTCATGCAATTTGCCAAAGTCATACTCGCC 61779 Query 106435 AGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTC 106494 | | || || || | || | ||| | ||||||| |||||||| || || Sbjct 61778 ACGAACAGGATCAACGTATGTGGGCAAGGCAAGCGATGCCAGGTTGCAAACTGCAACTTC 61719 Query 106495 ATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAA 106554 ||| | |||||||| | ||||| || || | ||| || || ||| || || | Sbjct 61718 ATCTGGGGCGGTGTACTCGATGATTTCCGTGCAGAGGTTCGAGCTTCGAATAGTTCCAAG 61659 Query 106555 ATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGT 106614 || || ||||| ||||| |||||||||||||||||| |||||| | || | ||||| Sbjct 61658 GTTTTTCTGGTTGCTCTTGCGGTTGCACGCATCCTTGTAAAGCATGAACGGGTTACCCGT 61599 Query 106615 CTCCGTCTG 106623 ||||||||| Sbjct 61598 CTCCGTCTG 61590 >seq2704 Length=633058 Score = 111 bits (122), Expect = 2e-19 Identities = 120/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| || |||||| ||||| || |||||||| |||||||| |||||| ||||| Sbjct 56443 GGCAAAGTCAGTGTGGAGGCCCTCGTCGCGGGAAATCAGTTCATTGGAGAAGGTGAGGCC 56502 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392 ||||| || || |||||||||| ||| | |||| | || || || ||| ||||| Sbjct 56503 AGGCATAAGGCCACGCTTCTTCAGCCAGAAGATAGAGGCAAAAGAGCCACTGAAAAAGAT 56562 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAA 117431 |||||| || ||||| |||| |||||||| ||| || Sbjct 56563 ACCCTCAACGGCTGCAAAGGCAACAAGGCGCTGGGCAAA 56601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589960711153760