Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq934 140 7e-28 seq1640 95.1 3e-14 >seq934 Length=187681 Score = 140 bits (154), Expect = 7e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || ||||| || || ||||| || ||||| | ||||| | || || ||| Sbjct 9794 ACAAGGTGGAGGGTGGATTCCTTCTGAATGTTATAATCAGAGAGAGTCCGGCCGTCCTCG 9735 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| | || || || || ||||| |||||||| |||||||| Sbjct 9734 AGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCTTGG 9675 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || || ||||| || ||||| |||||| ||||||||||| || | |||||| Sbjct 9674 ATCTTGGTTTTCACGTTATCGATGGTATCCGAAGACTCCACTTCAAGAGTGATGGTCTTT 9615 Query 195112 CCTGTCAAAGTTTTTAC 195128 || || | ||| || || Sbjct 9614 CCGGTAAGAGTCTTGAC 9598 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 194950 TCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAG 195009 || || || || || || |||| ||| || | |||||||| || |||||||| || || Sbjct 10232 TCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCATCTTCAAGTTGCTTACCAGCAAAA 10173 Query 195010 ATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTC 195069 || || |||||||||||||| || || || || || ||||| |||||| ||| ||||| Sbjct 10172 ATGAGACGTTGTTGGTCTGGTGGGATACCCTCCTTATCTTGGATTTTTGTCTTCACGTTG 10113 Query 195070 TCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129 || || ||||| || ||| || || | |||| ||||| || ||||| || || || Sbjct 10112 TCGATTGTGTCTGAGGATTCGACCTCTAACGTAATAGTCTTGCCGGTCAATGTCTTCACA 10053 Query 195130 AACACTTGCAT 195140 || | |||||| Sbjct 10052 AATATTTGCAT 10042 >seq1640 Length=153026 Score = 95.1 bits (104), Expect = 3e-14 Identities = 133/183 (73%), Gaps = 8/183 (4%) Strand=Plus/Plus Query 194953 TTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGAT 195011 || |||||||| |||||| |||| || | || || ||||||||||| || || || || Sbjct 9684 TTCTGAATATTATAATCGCTCAAG-GTGCGTCCGTCCTCGAGCTGCTTTCCGGCAAAAAT 9742 Query 195012 AAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTC 195071 | || || ||||| ||||| |||||||| ||||| ||||| || |||||| || || Sbjct 9743 CAAACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGAATCTTGCTCTTGACATTGTC 9802 Query 195072 AATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTAC 195128 || ||||| ||| ||||| || ||||| | ||||| || || | || || || Sbjct 9803 GATTGTGTCGCTCGA---CTCCACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTGAC 9859 Query 195129 GAA 195131 ||| Sbjct 9860 GAA 9862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109442877705308