Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq934 127 1e-24
>seq934
Length=187681
Score = 127 bits (140), Expect = 1e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831
||||||||||| || || ||||||||||| ||||| || || | || |||| ||
Sbjct 9499 AACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCTTC 9440
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
|||||||| || || || || | ||||||||||| | || | |||||||||||
Sbjct 9439 AAGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTG 9380
Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951
||||| || || | |||| |||| || |||||| |||| || ||||||||
Sbjct 9379 GATCTTGGTCTTAACATTGTCGATCGTATCACTGGACTCAACCTCGAGAGTGATGGTTTT 9320
Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
||||||||||||||||| || ||||||||
Sbjct 9319 GCCCGTGAGAGTCTTCACGAAAATCTGCAT 9290
Score = 93.3 bits (102), Expect = 3e-14
Identities = 154/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 34764 AACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGT 34823
|| ||||| |||||||| | || ||||| ||||| ||||||||||| ||||| | ||
Sbjct 10259 AATCTCAAGACCAAGTGCAACGTACTTTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGG 10200
Query 34824 TCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCC 34883
|||| || || || || || ||||| || || ||||| |||||| | || | ||||||
Sbjct 10199 CCATCTTCAAGTTGCTTACCAGCAAAAATGAGACGTTGTTGGTCTGGTGGGATACCCTCC 10140
Query 34884 TTGTCGCTAATCTTCTGT-TTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGT 34942
|| || || || ||| || ||| | || | || || || || || | ||
Sbjct 10139 TTATCTTGGAT-TTTTGTCTTCACGTTGTCGATTGTGTCTGAGGATTCGACCTCTAACGT 10081
Query 34943 TATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| || || || || | ||||||||||| || ||||||
Sbjct 10080 AATAGTCTTGCCGGTCAATGTCTTCACAAATATTTGCATA 10041
Score = 86.0 bits (94), Expect = 4e-12
Identities = 138/196 (70%), Gaps = 8/196 (4%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| || |||||||| ||||| || || | || |||| || ||||| || ||||| ||
Sbjct 10004 TCCTTTTGAATGTTGTAGTCTGAGAGTGTGCGACCATCTTCAAGCTGCTTGCCGGCGAAA 9945
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
||||| |||||||||||| | || | ||||||||||| || || ||||| | |
Sbjct 9944 ATTAGACGTTGCTGGTCTGGTGGAATTCCCTCCTTGTCTTGGAT-TTTTGTTTTA---AC 9889
Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966
| ||||||| || | ||||| || | || || || ||||| || | |||||
Sbjct 9888 GTTATCGATCGTGTCTGAAGATTCAACTTCAAGTGTGATTGTCTTTCCGGTCAAGGTCTT 9829
Query 34967 CACAAAGATCTGCATA 34982
|| || |||||||||
Sbjct 9828 GACGAAAATCTGCATA 9813
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324622822570272
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |