Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq934 127 1e-24 >seq934 Length=187681 Score = 127 bits (140), Expect = 1e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||||| || || ||||||||||| ||||| || || | || |||| || Sbjct 9499 AACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCTTC 9440 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 |||||||| || || || || | ||||||||||| | || | ||||||||||| Sbjct 9439 AAGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTG 9380 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 ||||| || || | |||| |||| || |||||| |||| || |||||||| Sbjct 9379 GATCTTGGTCTTAACATTGTCGATCGTATCACTGGACTCAACCTCGAGAGTGATGGTTTT 9320 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||||||||||||||| || |||||||| Sbjct 9319 GCCCGTGAGAGTCTTCACGAAAATCTGCAT 9290 Score = 93.3 bits (102), Expect = 3e-14 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 34764 AACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGT 34823 || ||||| |||||||| | || ||||| ||||| ||||||||||| ||||| | || Sbjct 10259 AATCTCAAGACCAAGTGCAACGTACTTTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGG 10200 Query 34824 TCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCC 34883 |||| || || || || || ||||| || || ||||| |||||| | || | |||||| Sbjct 10199 CCATCTTCAAGTTGCTTACCAGCAAAAATGAGACGTTGTTGGTCTGGTGGGATACCCTCC 10140 Query 34884 TTGTCGCTAATCTTCTGT-TTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGT 34942 || || || || ||| || ||| | || | || || || || || | || Sbjct 10139 TTATCTTGGAT-TTTTGTCTTCACGTTGTCGATTGTGTCTGAGGATTCGACCTCTAACGT 10081 Query 34943 TATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || || | ||||||||||| || |||||| Sbjct 10080 AATAGTCTTGCCGGTCAATGTCTTCACAAATATTTGCATA 10041 Score = 86.0 bits (94), Expect = 4e-12 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || || |||||||| ||||| || || | || |||| || ||||| || ||||| || Sbjct 10004 TCCTTTTGAATGTTGTAGTCTGAGAGTGTGCGACCATCTTCAAGCTGCTTGCCGGCGAAA 9945 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 ||||| |||||||||||| | || | ||||||||||| || || ||||| | | Sbjct 9944 ATTAGACGTTGCTGGTCTGGTGGAATTCCCTCCTTGTCTTGGAT-TTTTGTTTTA---AC 9889 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||||| || | ||||| || | || || || ||||| || | ||||| Sbjct 9888 GTTATCGATCGTGTCTGAAGATTCAACTTCAAGTGTGATTGTCTTTCCGGTCAAGGTCTT 9829 Query 34967 CACAAAGATCTGCATA 34982 || || ||||||||| Sbjct 9828 GACGAAAATCTGCATA 9813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324622822570272