Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq2528 154 2e-32
seq2704 91.5 2e-13
>seq2528
Length=594046
Score = 154 bits (170), Expect = 2e-32
Identities = 368/553 (67%), Gaps = 14/553 (3%)
Strand=Plus/Minus
Query 48125 CTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGA 48184
|||||| || || || || |||| | | ||||| || ||||| ||||| | ||| |
Sbjct 61453 CTCAAACTCGTCGCCGTAAACATCAGCCAACCCTGGTGCCTCATTGGGACAGAACAAGGT 61394
Query 48185 CCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAA 48244
|||||| | | || | || | ||||||| | |||||| |||| ||||| | |||
Sbjct 61393 CCAATCGCCGTTCTTCTCAACCCGCTTCATAAACAAATCTGGGGTCCAGAGAGCAAGAAA 61334
Query 48245 TAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTA---AGTTCAAGAAAGTC 48301
| ||| | || ||| | ||| || || || || |||| || || | ||| ||
Sbjct 61333 GAGATCACGAGCTCTCACTTCCTCTTTTCCGTGGTT---TTTACGGAGATCCAAAAATTC 61277
Query 48302 CATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACC 48361
| ||||| | ||||| ||||| | ||| || || | |||||||||||||||| ||
Sbjct 61276 GAAGATATCGGAGTGCCAGGGTTCAAGATAGATGGCGAAGGCACCTGGTCGTTTATTGCC 61217
Query 48362 TCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATT 48421
|| || || | ||| | ||||| ||||| | || | | ||| |||| || || ||
Sbjct 61216 ACCCTGGTCAACATAGCGAGCAGTGTTGTTGAAGACACGGAGCATGGGGATGATTCCGTT 61157
Query 48422 TGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATA----TTACTAATTG 48477
|| ||||| ||||| | ||| || ||| | || | ||| ||| |||
Sbjct 61156 AGAGGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTGGCACGGATACGGTGTAC--ATT- 61100
Query 48478 AAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAA 48537
|| ||| |||||||| || | || || || || ||||| ||| || ||||| || |
Sbjct 61099 -AAGACCAATACCACCAGCTGTCTTGGAAATCAGTGCACAGGTTTTGAGCGTATCGTAGA 61041
Query 48538 TTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGAC 48597
| ||||| |||||||| || |||| | | || ||||| | |||||| || ||
Sbjct 61040 TACCTTCGATACTATCCTCCTTCATGTCGATGAGGAAACAGGATGCCATTTGTGGCTGTG 60981
Query 48598 AAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATT 48657
|||||| | || || | || ||||| || ||| | || |||| | || | ||| |
Sbjct 60980 GAGTTCCCGCGTTGAAAAGAGTGGGAGAAGCGTGAGTGAAGAATTTTTGGGACATCAAAT 60921
Query 48658 TATATGTTTCAAT 48670
| || ||||||||
Sbjct 60920 TGTAAGTTTCAAT 60908
>seq2704
Length=633058
Score = 91.5 bits (100), Expect = 2e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 18960 ACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAA 19019
||| ||||| ||| || || |||||||| | |||| |||||| || || || |
Sbjct 56440 ACAGGCAAAGTCAGTGTGGAGGCCCTCGTCGCGGGAAATCAGTTCATTGGAGAAGGTGAG 56499
Query 19020 ACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAA 19079
|||||||| || || | || || | |||||| ||||| ||||| || ||| || ||
Sbjct 56500 GCCAGGCATAAGGCCACGCTTCTTCAGCCAGAAGATAGAGGCAAAAGAGCCACTGAAAAA 56559
Query 19080 TATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATG 19139
||||| || || |||||||| ||||| || | | || || | | || | | ||
Sbjct 56560 GATACCCTCAACGGCTGCAAAGGCAACAAGGCGCTGGGCAAAAGTTGATTCCTGGTCTTG 56619
Query 19140 AATCCATTTCAGTGCCCAATCAGCCTTCTT 19169
|||||| | |||||||||||||||||
Sbjct 56620 GATCCATCGAATGGCCCAATCAGCCTTCTT 56649
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562089660195360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |