Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq2004 159 3e-33 seq2192 91.5 1e-12 >seq2004 Length=401351 Score = 159 bits (176), Expect = 3e-33 Identities = 366/545 (67%), Gaps = 6/545 (1%) Strand=Plus/Minus Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054 |||||||| |||||||| |||||||| ||||| ||| | | | ||| | Sbjct 16610 ATAGGTATTGATTTAGGTACCACATACTCCTGTGTGGGTATCTTCCGTGATGACCGGATC 16551 Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114 ||||| |||||||| || || || ||| | ||||| || || | || | ||||| || Sbjct 16550 GAAATCATTGCCAACGACCAGGGAAACCGCACTACCCCCTCCTTCGTCGCCTTCACTGAT 16491 Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACT 550174 || |||| | | | || ||||| || || |||||| | | || || |||||||| Sbjct 16490 ACCGAACGTCTGATCGGAGATGCTGCTAAGAATCAAGTCGCCATGAACCCCACCAATACC 16431 Query 550175 ATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGAT 550234 | || || || || ||| | || || | | ||||| ||| | || || || ||| Sbjct 16430 GTCTTCGACGCCAAGCGTCTCATCGGTCGCAAGTTTAACGATGCTGAAGTCCAAGCCGAT 16371 Query 550235 ATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT-AC 550293 |||||||||| |||||| | ||| | | || || || || ||| | || Sbjct 16370 ATGAAGCATTTCCCTTTCAAGATTATCGACAAGGGCGGCAAGCCCATCATCCAAGTTGAC 16311 Query 550294 TCATGAAGGATCTGTTAAA-CAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGA 550352 | | |||| | || || || | || || |||| || || ||||| || | | Sbjct 16310 T--TCAAGGGCGAGACCAAGCAGTTCACTCCTGAGGAAATCTCCTCCATGGTCTTGACCA 16253 Query 550353 AAATGAAACAAACAGCC-AGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACT 550411 | |||| | |||| ||| ||| || ||||| | |||| |||| || | ||| Sbjct 16252 AGATGAGAGAAACTGCCGAGTCCTACC-TTGGTGGAACTGTTAACAATGCCGTCGTGACT 16194 Query 550412 GTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCT 550471 || || || || || || ||||| || ||||||||||| || ||||| || | ||||| Sbjct 16193 GTTCCTGCCTACTTCAACGACTCCCAGCGTCAAGCTACCAAGGATGCCGGTCTCATTGCC 16134 Query 550472 GGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTT 550531 || ||||| ||||| ||||| ||||| || ||||||||||| || |||| ||||| ||| Sbjct 16133 GGTCTTAACGTTCTCCGTATCATCAACGAGCCTACTGCTGCCGCCATTGCCTATGGCCTT 16074 Query 550532 GATAA 550536 || || Sbjct 16073 GACAA 16069 >seq2192 Length=301127 Score = 91.5 bits (100), Expect = 1e-12 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || || || || || || || || || |||||||||||||| || |||||||| | ||| Sbjct 256365 ACAGTCCCTGCCTACTTCAACGATTCTCAACGTCAAGCTACCAAGGATGCTGGTCAGATT 256306 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 ||||| || || || |||||| | | || || || || |||||||| ||||| || || Sbjct 256305 GCTGGCCTCAACGTCCTTCGTGTCGTTAACGAGCCCACCGCTGCTGCCCTTGCCTACGGT 256246 Query 550529 CTTGATAA 550536 ||||| || Sbjct 256245 CTTGAGAA 256238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029151942594760