Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq2004 159 3e-33
seq2192 91.5 1e-12
>seq2004
Length=401351
Score = 159 bits (176), Expect = 3e-33
Identities = 366/545 (67%), Gaps = 6/545 (1%)
Strand=Plus/Minus
Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054
|||||||| |||||||| |||||||| ||||| ||| | | | ||| |
Sbjct 16610 ATAGGTATTGATTTAGGTACCACATACTCCTGTGTGGGTATCTTCCGTGATGACCGGATC 16551
Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114
||||| |||||||| || || || ||| | ||||| || || | || | ||||| ||
Sbjct 16550 GAAATCATTGCCAACGACCAGGGAAACCGCACTACCCCCTCCTTCGTCGCCTTCACTGAT 16491
Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACT 550174
|| |||| | | | || ||||| || || |||||| | | || || ||||||||
Sbjct 16490 ACCGAACGTCTGATCGGAGATGCTGCTAAGAATCAAGTCGCCATGAACCCCACCAATACC 16431
Query 550175 ATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGAT 550234
| || || || || ||| | || || | | ||||| ||| | || || || |||
Sbjct 16430 GTCTTCGACGCCAAGCGTCTCATCGGTCGCAAGTTTAACGATGCTGAAGTCCAAGCCGAT 16371
Query 550235 ATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT-AC 550293
|||||||||| |||||| | ||| | | || || || || ||| | ||
Sbjct 16370 ATGAAGCATTTCCCTTTCAAGATTATCGACAAGGGCGGCAAGCCCATCATCCAAGTTGAC 16311
Query 550294 TCATGAAGGATCTGTTAAA-CAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGA 550352
| | |||| | || || || | || || |||| || || ||||| || | |
Sbjct 16310 T--TCAAGGGCGAGACCAAGCAGTTCACTCCTGAGGAAATCTCCTCCATGGTCTTGACCA 16253
Query 550353 AAATGAAACAAACAGCC-AGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACT 550411
| |||| | |||| ||| ||| || ||||| | |||| |||| || | |||
Sbjct 16252 AGATGAGAGAAACTGCCGAGTCCTACC-TTGGTGGAACTGTTAACAATGCCGTCGTGACT 16194
Query 550412 GTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCT 550471
|| || || || || || ||||| || ||||||||||| || ||||| || | |||||
Sbjct 16193 GTTCCTGCCTACTTCAACGACTCCCAGCGTCAAGCTACCAAGGATGCCGGTCTCATTGCC 16134
Query 550472 GGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTT 550531
|| ||||| ||||| ||||| ||||| || ||||||||||| || |||| ||||| |||
Sbjct 16133 GGTCTTAACGTTCTCCGTATCATCAACGAGCCTACTGCTGCCGCCATTGCCTATGGCCTT 16074
Query 550532 GATAA 550536
|| ||
Sbjct 16073 GACAA 16069
>seq2192
Length=301127
Score = 91.5 bits (100), Expect = 1e-12
Identities = 97/128 (76%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468
|| || || || || || || || || |||||||||||||| || |||||||| | |||
Sbjct 256365 ACAGTCCCTGCCTACTTCAACGATTCTCAACGTCAAGCTACCAAGGATGCTGGTCAGATT 256306
Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528
||||| || || || |||||| | | || || || || |||||||| ||||| || ||
Sbjct 256305 GCTGGCCTCAACGTCCTTCGTGTCGTTAACGAGCCCACCGCTGCTGCCCTTGCCTACGGT 256246
Query 550529 CTTGATAA 550536
||||| ||
Sbjct 256245 CTTGAGAA 256238
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029151942594760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |