Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_016762.1 Length=49135 Score E Sequences producing significant alignments: (Bits) Value seq559 306 1e-78 seq828 167 7e-37 seq1459 123 8e-24 >seq559 Length=35318 Score = 306 bits (338), Expect = 1e-78 Identities = 582/843 (69%), Gaps = 22/843 (3%) Strand=Plus/Minus Query 5466 CCTTGACCACCGGAATGTCGCCGTAGGCGTTGGAGTTGTCGGTGGGGGGCTTGCGGAAGA 5525 ||||| ||||| ||||| | || || ||| |||| | | |||||||| | | Sbjct 25426 CCTTGGTGACCGGCGTGTCGGCATAACCGCGTGAGCGGTCGCTTTGCGGCTTGCGCATCA 25367 Query 5526 TCAGCAGGTACTCGGGCATGCCGACACCCATCTTGGTGCCGTCCTTGCACTGTTCCGTCC 5585 ||||| ||| ||||| ||||| |||||||| ||||||||||| | || | Sbjct 25366 GCAGCACGTATTCGGGGCTGCCGCAGCCCATCTTCGTGCCGTCCTTCAGCATCTCGCTGT 25307 Query 5586 ACGAGAGGCGGTAGGTCTGGGCGTTCTCGCGAACCACGTCGGTGACGATGGTCTTCATGC 5645 |||| ||||||||||||||| ||||||||| || ||||||||||||| ||| |||||| Sbjct 25306 ACGACAGGCGGTAGGTCTGGTTGTTCTCGCGCACGACGTCGGTGACGACGGTGATCATGC 25247 Query 5646 CCATATAGGCCCAGCCATGCTTGACGAAG-GCTCGAGTCACTTCCATGTGGAAGGGGTAG 5704 |||| | |||| || | || |||||| ||||| |||||| || | | Sbjct 25246 CCATGAACTGGAAGCCGTGGCGCATATAGTGCTCGATGCACTTGGC-GTGGAACGGATTG 25188 Query 5705 ACGGTCTGGAAGCCAAGGCCGGTCATTCCGCCGGGAATGATGCGATCCTTCACGTGGATG 5764 |||||| | | || |||||||| | | ||| | ||| || ||||||||||||||| Sbjct 25187 ACGGTCGGCACACCCTCGCCGGTCACTGCACCGAACAGGATCCGGTCCTTCACGTGGATG 25128 Query 5765 CAGGCCAGACG-CCCGGGGATGGTCACGCGCAGCAGTTCCGGGATCAGATAGTCCATCTG 5823 ||||| || || ||||| | | | | || ||||| | ||| |||||| |||||||| Sbjct 25127 CAGGCGAGCCGGCCCGGCGCCAG-CGCACGGAGCAGGTTCGGCGTCAGATGATCCATCTG 25069 Query 5824 CTCGAAGAAGTGCGCGTTGTCGTCGGTGTGGCCGAAGTCGGCGTAGTTCGGCGAGTACTC 5883 | ||||||| ||| ||| ||||| ||||||||||||||| |||| |||||| |||||| Sbjct 25068 CGCGAAGAAATGCCCGTCATCGTCCGTGTGGCCGAAGTCGTTGTAGCTCGGCGTGTACTC 25009 Query 5884 GTACTGGGTGCTGAAGGGGATGCTGGTGATGGTCAAGCCGACGCTGTTGCTT--TCCATG 5941 ||| ||| ||||||| |||||| ||||| | ||| | ||| | | | ||| |||| Sbjct 25008 GTAGTGGTTGCTGAACGGGATGGAGGTGACGATCAGGTCGA--CCGATCCTTCGTCCAGC 24951 Query 5942 C-GGCAGGTT--TCGAGCACGGTGTCGTTGTTGACGATGGTGTAGTCCTTGCCCTTGATC 5998 | ||||| | ||| ||| |||||||| | | || || | | ||| ||| | Sbjct 24950 CGGGCAGCCTCATCG---ACGCAGTCGTTGTGCGCCAGCGTCCAGCCGTCGCCAGTGACC 24894 Query 5999 TCGACGCGCTCCACGCCCATGGAGCGGGTGAGGGTCTGTGCC-ATGGCG--GCCACG-GA 6054 || ||||| ||||| || ||||| |||| | ||| | |||| | || | Sbjct 24893 TCCTGCCGCTCGACGCCGATCGAGCGCTTGAG----CGCGCCGAGGGCGACGTCATGCTG 24838 Query 6055 CAGGCCGTACTGCTTGATGATCTCGGTCATGCGCTGAACCATGGTGTTGTGCTGCTGCCA 6114 |||||| || | ||||||||||| |||||| || | ||| || ||| Sbjct 24837 CAGGCCATATTCGCGGATGATCTCGGACATGCGGGCGCTCAGCTCCTCGTGACGCGCCCA 24778 Query 6115 CTTCCGTTCGAGTTGGCGGCGGATGTCGCGCTCGGCCTCGGTATAGATCAGGTCGATGCG 6174 |||| | || | ||| || || ||||| | |||| | ||| | ||||| Sbjct 24777 CTTCGCCTGCAGGTCGCGCACGACCTCCCGCTCAGTTTCGGCGTGGATGATGTCGACCTC 24718 Query 6175 CACACGGCCTGTCTGCAGGAATCGGTGCAGGCGGTGAATGGACTGGATGAAGTCGTTGAA 6234 || || | |||| |||| || || || ||||| || | |||||||||||||||||| Sbjct 24717 GACCGGGTGCGACTGCTGGAAGCGCTGGAGCCGGTGGATCGCCTGGATGAAGTCGTTGAA 24658 Query 6235 CTTGAAGCCGATGCCCAGGTAGATGGCCCACGAGCAGTGGCGCTGGAAGTTGCAGCCGCT 6294 ||||||||| | ||| | | | | ||| | |||||||||||| | |||| |||||| Sbjct 24657 CTTGAAGCCTACGCCGACGAACACGGCGCGGTGGCAGTGGCGCTGCAGGTTGGTGCCGCT 24598 Query 6295 GCC 6297 ||| Sbjct 24597 GCC 24595 Score = 143 bits (158), Expect = 8e-30 Identities = 314/473 (66%), Gaps = 38/473 (8%) Strand=Plus/Minus Query 6615 GGTCGGACGGTACTTCGTGCCAGCGGATGTCCAGTTCCGGTAGCGCGTAGCCTTCGTCGC 6674 |||| ||| | || ||||||||||| | | || | || || ||||||| ||||| | Sbjct 23219 GGTCAGACTGGACCTCGTGCCAGCGCACGGTGAGCGCGGGCAGATCGTAGCCGTCGTCAC 23160 Query 6675 TGAACCCGAGGTCGCTGGGGCGCTGAACGAAGATCGCCCAGGACGCCACCCACATCCAGA 6734 |||| ||||||||||| |||||||| | ||| | |||||| || ||||| ||||| Sbjct 23159 TGAATCCGAGGTCGCTCGGGCGCTGCAGGAAAACGGCCCAGCTATTCAGCCACAGCCAGA 23100 Query 6735 ACTCGCCCTCTTTGTGGGCATGGATGGTGAGTTGGTCGGCCTTCTCAGAGTTGCGTTTGA 6794 |||| || ||||| | | || |||||| | | | |||||||| |||||| | || Sbjct 23099 ACTCTTGTTCCTTGTGCGGGTAGAGGGTGAGATCGCCCGCCTTCTCGCTGTTGCGCTGGA 23040 Query 6795 AGAACCTGGTCTTGGCCTGGCCGACATCCATCACGCCGAGGAAGGCCGAGTAAGCCAGTA 6854 |||| | ||| || |||||| ||||||||||||||||| | | |||| | | Sbjct 23039 AGAAGCGGGTGAGCGCTTGGCCGGTGTCCATCACGCCGAGGAAACCGGCGTAATGGATCA 22980 Query 6855 GCTCGATGTATTCGTTCGGGCTTGGCGTGGCAGTGGCCACGTACCGGTACCGGACGCCAT 6914 |||| |||| ||| || || ||||| || || || | |||| ||| || Sbjct 22979 GCTCCTTGTAGCGGTTGGGCGAGGGGGTGGCGGTCGCGACAAATCGGT-----ACGGCAC 22925 Query 6915 CGCCGCGGACGCCGGCGGCGCGATCGTCACCAGCGAACAGAGCCATGAACTCGCGGAACG 6974 |||| |||| || | || |||| |||| | Sbjct 22924 CGCC----------------------------TCGAATAGCGGCAGGAACGTCTGGAAGG 22893 Query 6975 TCTTGCTGCCGCCGAAGCCGCGAAGGCAACTGGCTTCGTCCAGGCTTGCCACGCTGAA-C 7033 |||| || | ||||| ||| ||| || || ||||||||||| | || |||| Sbjct 22892 TCTT--TGAC-CCGAACGAGCGGAGGATGCTCGCCTCGTCCAGGCTGACGGCGGTGAAGG 22836 Query 7034 CGGCGAGGGTCGAGCTTGCCGTCGCGGACGGTCTCGTAATTGGTCAGGTAGAT 7086 | || ||||| |||||||||||||||| ||||||||||||||||| |||| Sbjct 22835 TTGTGA-CGTCGACCTTGCCGTCGCGGACGCTCTCGTAATTGGTCAGGAAGAT 22784 Score = 123 bits (136), Expect = 8e-24 Identities = 142/190 (75%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 4959 GCGCGCAGTACGGGACGGTCATGATCCCGCCGAAGGGATCGAAGACCAGGTCTCCTTCCA 5018 ||||||| ||| ||||| || |||| ||| |||||||| ||||| || || || Sbjct 26004 GCGCGCAT--CGGCACGGTGCCGAGGCCGCAGAACGGATCGAACACCAGCTCGCCGCGCA 25947 Query 5019 TGGAGTACTGCACGATGGCCCGGTCGACGATGTCGAACTGCAGCGGGCACAGGTGCATTT 5078 | ||||| || |||| ||||||||||||||||||||| || ||||| | |||| | | Sbjct 25946 TAGAGTATCGCTCGATCAGCCGGTCGACGATGTCGAACTGGAGGGGGCAGACGTGCTTCT 25887 Query 5079 CCTGGCCCTTGCTGTACTGCTGGGCGTTGAGCGTCCGCATGCGGGCGACGTCGGTCCATA 5138 | |||||||| | ||||| | ||||||||||| |||| || ||| |||| ||| | Sbjct 25886 CGGCGCCCTTGCGGACCTGCTCGCCGTTGAGCGTCTGCATCCGCACGATGTCGTCCCACA 25827 Query 5139 CGTCCGGGTG 5148 |||| || || Sbjct 25826 CGTCGGGATG 25817 >seq828 Length=10702 Score = 167 bits (184), Expect = 7e-37 Identities = 239/332 (72%), Gaps = 15/332 (5%) Strand=Plus/Minus Query 21195 TGAGCCTGCTGGTGGTGGACTACCTGCAGCTGCTG---GAGAGCTCCGGCAAGTCC-ACT 21250 || ||||| | |||||||||||||||||||| || | | ||| |||| | | || Sbjct 1884 TGGGCCTGATCGTGGTGGACTACCTGCAGCTCATGAGCGTGTCCTCGGGCATGAGCGACG 1825 Query 21251 CGCACCGAGG-AC----GTCAGCGACATGTCCCG---CCAGTGCAAGCTGCTGGCGATGG 21302 | |||| | || || |||| || ||||| || | ||| |||||| | || Sbjct 1824 AGAACCGCGCCACCGCGGTGGGCGAGATCTCCCGTGGCCTG---AAGGCGCTGGCCAAGG 1768 Query 21303 AGCTTGGTATCCCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAGCAGCGGCCGA 21362 | || || ||| ||||||| |||||||||||| ||| | ||||| ||| | Sbjct 1767 AACTGGGCTGCCCGGTGATCGCGCTGTCGCAGCTGTCACGCGGCGTGGAGTCGCGCACCG 1708 Query 21363 ACAAGCGACCGATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCAGGACGCCGATG 21422 ||||||| ||||||||| ||||||||||| || || || ||||||||||||||||| | Sbjct 1707 ACAAGCGCCCGATGATGAGCGACCTGCGCGAATCGGGCGCCATCGAGCAGGACGCCGACG 1648 Query 21423 TGATCATGTTCGTGTACCGCGACGAGGTCTACCACCCGGATACCCAGTACCGCGGCGTGG 21482 | ||||||||| | ||||||||||| |||| || ||| || || | | |||||||| Sbjct 1647 TCATCATGTTCATCTACCGCGACGACTACTACAACAAGGACTCCAAGGAGCCCGGCGTGG 1588 Query 21483 CTGAGTTGATCATCGCGAAGCACCGCAACGGC 21514 | ||| |||||||| ||||| || || ||| Sbjct 1587 CCGAGGTGATCATCAGCAAGCAGCGGAATGGC 1556 >seq1459 Length=17170 Score = 123 bits (136), Expect = 8e-24 Identities = 109/136 (80%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 21312 TCCCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAGCAGCGGCCGAACAAGCGAC 21371 |||||||| ||| |||||||||||||| ||| | |||||||||| | ||||||| | Sbjct 10769 TCCCCGTGCTCGCGCTGTCGCAGCTCAGCCGTGCGGTGGAGCAGCGCGAGGACAAGCGCC 10828 Query 21372 CGATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCAGGACGCCGATGTGATCATGT 21431 || | |||| ||||| ||||| ||||| ||||||||||||||||||| || || || Sbjct 10829 CGCAGCTGTCCGACCTTCGCGAATCCGGCTCGATCGAGCAGGACGCCGACATGGTCTGGT 10888 Query 21432 TCGTGTACCGCGACGA 21447 |||||| |||||| || Sbjct 10889 TCGTGTTCCGCGAAGA 10904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157105317871336