Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_019400.1 Length=147940 Score E Sequences producing significant alignments: (Bits) Value seq1375 86.0 6e-12 seq2541 84.2 2e-11 >seq1375 Length=1305 Score = 86.0 bits (94), Expect = 6e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 85031 TGGGGTATTAACTCAGCGGTTAGAGTAGCGGCCTCTTAAGCCGAAGGTCGAAGGTTCGAA 85090 |||| | ||| ||||| | ||||| ||||| ||||||| ||| |||||||||||||||| Sbjct 201 TGGGTTCTTAGCTCAGTTGGTAGAGCAGCGGACTCTTAATCCGTAGGTCGAAGGTTCGAA 260 Query 85091 TCCTTCATGCCCCACCA 85107 ||||||| | ||||||| Sbjct 261 TCCTTCAGGACCCACCA 277 >seq2541 Length=5479 Score = 84.2 bits (92), Expect = 2e-11 Identities = 74/91 (81%), Gaps = 1/91 (1%) Strand=Plus/Plus Query 90056 TCTGCACCTTCGGAGCGTAGCGCAGTCTGGTCAGCGTGGGTGCCTTGGATGCACTGGGTC 90115 || || ||||||||||||||||||||||||| |||| || |||| || ||||| Sbjct 1220 TCGGCGCCTTCGGAGCGTAGCGCAGTCTGGT-AGCGCATCTGGTTTGGGACCAGAGGGTC 1278 Query 90116 GCAGGTTCGAATCCTGCCGCTCCGACCAATT 90146 | ||||||||||||| |||||||||||||| Sbjct 1279 GTAGGTTCGAATCCTATCGCTCCGACCAATT 1309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473263884816000