Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_019405.1 Length=215710 Score E Sequences producing significant alignments: (Bits) Value seq1360 172 8e-38 seq1164 129 8e-25 seq1099 84.2 3e-11 >seq1360 Length=3671 Score = 172 bits (190), Expect = 8e-38 Identities = 433/648 (67%), Gaps = 24/648 (4%) Strand=Plus/Minus Query 84445 GAAGTGCTGGATCGAACCCTCGGCCGCGACGATTGACTTCCAGACCGCCTCGGTGTTCAG 84504 || |||||| | ||| || || ||| |||||| ||||||| || |||| ||| Sbjct 2212 GAGGTGCTGCACCGACCCGCCGTGTTCGAGGATTGAGCTCCAGACGGCTTCGGAATTCTT 2153 Query 84505 GCCCAGTTCACCCAGGCGCTTCTTCAGCCAGCGGTTCTTGACGGCGAACGAGCCCGACAG 84564 || | || || |||| | ||| | |||||||||| ||||| ||||||||| Sbjct 2152 GCTCTTCTCGTTGAGCAGCTTTTCCAGATACGGGTTCTTGACCGCGAAACTGCCCGACAG 2093 Query 84565 GGTCTTGTGCAGGAAGGTGTTGGCCGGGATCGGCTCGATCGACGGCGAGGTGCCTCCGCA 84624 |||||||| | || |||||||||||||||||||||| | | ||||||||| ||||| Sbjct 2092 CGTCTTGTGGGTGTAGATGTTGGCCGGGATCGGCTCGATGCAGGCCGAGGTGCCGCCGCA 2033 Query 84625 GAGGATCGAGGACGAGGCGTTGGGCGCCACGGCCAGCTTGTGGGCGAACCGCTCGCCCGT 84684 || ||||||| ||| ||| ||||||| | |||| |||| | || |||| || | Sbjct 2032 GATGATCGAGATCGACGCGGTGGGCGCGATCGCCATCTTGCACGAAAAACGCT---CCAT 1976 Query 84685 GCCTTCCATGTC--CGGCGCC-------TCGCCGCGCTCCTTGCCCAGCAGCAGGGAAGC 84735 | ||||||| ||||| | ||||||||| | ||||| || || || Sbjct 1975 CACGCCCATGTCGGCGGCGTCGGGGCAGGGGCCGCGCTCGGCGGCCAGCGTCATCGACGC 1916 Query 84736 CGCGTCGGCCTGCTTGCGCATGTGGGCGAACAGTTCCAGGTT-CAGCCGGCGGGCGGCGT 84794 | | ||||| | | ||| ||| | |||||| |||| | | | Sbjct 1915 CTGATTCACCTGCGCGTTGACGTGCTTGAAGATGCGCAGGTTCCAGCTCTTCGCCATGGC 1856 Query 84795 GACTCTCGAACGGGATGTCCAGCATCTGGAGCAGCGAGTGGAAGCCGAGCAGGCCCAGGC 84854 | || || | ||| | | || |||||| | ||||||||||| | | |||||||| Sbjct 1855 GCCT-TCCATCGGCAGCCCGCGCGCCTGGAGGAAGGAGTGGAAGCCCATGACGCCCAGGC 1797 Query 84855 CCACCGACCGTTCGCGCACGGCGCTGTAGGCGGCGCGGTGCATCTCGTCCGGCGCGT--- 84911 | ||||| || |||||| | ||| ||||| ||||| | ||| | ||||| ||| Sbjct 1796 CGACCGAGCGCTCGCGCGCCGCGGAATAGGCCGCGCGCTCCAT---GCCCGGCTCGTGCC 1740 Query 84912 TGTCGATGAACACCTGGAGGCAGTTGTCCAGCATGCGCAGCAGGTCTTCGATGAAGGTCG 84971 |||||| | |||| || |||||| || | ||||| || ||| |||||||| | Sbjct 1739 GGTCGATATAATCCTGCAGCACGTTGTCGAGGAAGCGCATCACGTCCTCGATGAACTGCT 1680 Query 84972 GGTGATCCCGCCACTCCGGCCACTTCTCGGCGTTGACGCTGGAGAGGCAGCAGACGGCGG 85031 || ||| ||||| |||| ||||| ||| | || |||||||||||||||| Sbjct 1679 TGTCGTCCTTCCACTGGTCCCACGTCTCGAGGTTCAGCGACGACAGGCAGCAGACGGCGG 1620 Query 85032 TCCGCATC-TTGCCGAAGAT-GTCGCGGCCCGAGCCCAGCATGATCTC 85077 | || ||| ||||| |||| ||| ||||| |||| ||||||| Sbjct 1619 TGCG-ATCGTTGCC-CAGATGGTCCTTGCCCGTCGGCAGCGTGATCTC 1574 Score = 113 bits (124), Expect = 6e-20 Identities = 154/212 (73%), Gaps = 5/212 (2%) Strand=Plus/Minus Query 86586 GGCCGCGCGCGGACCCGCCGTTCGACAGCAGGGGCGTGGCGAACATGAACCAGAGGTTCG 86645 |||||||| ||| |||||||||||||||| ||||| ||| ||||||||| ||| || Sbjct 926 GGCCGCGCCCGGTGCCGCCGTTCGACAGCACCGGCGTTGCGGGCATGAACCACAGGCGCG 867 Query 86646 AGACATAGTCGTAGAGCCGCTGGCCGTGCTCGGCGTCATCCGCGAAGGCCGCACTCG-CG 86704 |||||||||| |||| ||||| ||||| ||||||| || || ||| ||| || || Sbjct 866 AGACATAGTCATAGATGCGCTGCGCGTGCGCGGCGTCGTCGGCATAGG-CGCTGGCGACG 808 Query 86705 CGCGCGAAGGCCTCCTGGGGCGAGCTTTCCCCAGGCAGCAGATAGCGTTCACGGAGGGTC 86764 || | ||| |||| | || ||| || |||||||||||||| || | | ||| Sbjct 807 CGGACAAAGAGATCCT---GATAGGATTCGCCCGGCAGCAGATAGCGGTCCTGCAACGTC 751 Query 86765 TGAAGGGTGAAGTCGTCGAGCAGGGCGTCGCG 86796 | | ||| ||| ||||| |||||||| Sbjct 750 TCCTTGCCGAAATCGGTCAGCAGCGCGTCGCG 719 >seq1164 Length=3258 Score = 129 bits (142), Expect = 8e-25 Identities = 337/507 (66%), Gaps = 19/507 (4%) Strand=Plus/Minus Query 83392 GGCTCTCGTCGCGGATCGACCACTCGACGATCGTGGTCATGCCCTTCATGCGATTGCGAC 83451 ||||||||||||| | |||||| ||||||| |||||||||||| ||| | Sbjct 1293 GGCTCTCGTCGCGCACCGACCAGCTGACGATCTGCCCCATGCCCTTCATCTTGTTGAAGC 1234 Query 83452 GCTGGAAGGACATCAGCAGAGCGAAGGACGAGAAAAGCTGCATCCCCTCGCCGAAGGCCG 83511 || | ||| ||| |||| ||||| |||| ||| ||||||| |||||| |||| | Sbjct 1233 GCGGAAAGTTCATGAGCATCGCGAACGACGCGAACAGCTGCACGCCCTCGGTGAAGCCGC 1174 Query 83512 AGAACACGGCGATGTCGACCATCAGGTCGGCGATCGAGTTGCCGCTGTC----CCGA--T 83565 ||||| ||||| | || || ||||| | ||||||| |||| | Sbjct 1173 CGAACATGGCGAG------CGTCCGG---GCGATATCCTCATCGCTGTCGACGCCGAAGT 1123 Query 83566 TGAACATGTACTCGTGCTTCTCGCGCATCGCCTCGTAGTCGAGGAAGGCGCGGAACTCGA 83625 | |||||| || ||||| || || | | | || |||||||| |||| | ||| Sbjct 1122 TCTGCATGTAATCATGCTTGTCCTTCAGCTCGGCATATTCGAGGAACGCGCCATATTCGC 1063 Query 83626 CCTCGGGCAGGCCCAGGGTGTCGATCAGCGTCGA-GTAGGCGTCGATGTGGTTGGCCTCG 83684 || |||| ||| | ||||||| ||| || | |||||| ||||||| | || Sbjct 1062 TTTCCGGCATGCCGATCGTGTCGAGCAG-GTGGCTGTAGGCCGCGATGTGCACCGTTTCC 1004 Query 83685 GCGGCGATGAACGCGCCCAGCATCATCCGCACTTCCGGGTGCGGGAAG-CGCGGGCCGTA 83743 | | |||||||| |||||||||| | || | || ||| ||||| ||||| Sbjct 1003 ATGTTGCTGAACGCGGTCAGCATCATCTTGATCTCGGTCGGCTTGAACACGCGG-CCGTA 945 Query 83744 CTTCTCGAAGTAGCCGCGCGCCACGTCGACGTCGGCCTGGGTGAAGAACCGGAAGAGTTG 83803 |||||| |||| | ||| ||||| || |||||||||||||| ||||||| || Sbjct 944 TTTCTCGTGATAGCAATCCTGCACCTCGACATCCGCCTGGGTGAAGAAGCGGAAGATCTG 885 Query 83804 CGTCAGCAGGGACTTCTCGTCCGGCGTCAGCTTCTCGTTCCAGTCCTGGATGTCCTGGTC 83863 |||||||||| ||||| |||||||||| ||| || || |||| | | Sbjct 884 CGTCAGCAGGTTGCGCTCGTGATCGGTCAGCTTCTGCGCCCAATCACGGCAATCCTCGCC 825 Query 83864 CATGGGGGCTTCGTGCGGAAGCCAGTG 83890 || || |||| | || |||||||| Sbjct 824 CAGCGGCACTTCCTCAGGCAGCCAGTG 798 >seq1099 Length=3182 Score = 84.2 bits (92), Expect = 3e-11 Identities = 135/190 (71%), Gaps = 8/190 (4%) Strand=Plus/Minus Query 145100 CTTCAGGACCTTCAGCCAGGAGGCGACATAGGAGGCGTGATCCTC---ACGGACTTCCGG 145156 ||| |||||||| |||||| | ||| ||| || ||||| || | || | | || Sbjct 1904 CTTGAGGACCTTGAGCCAGCTGCCGAGGTAGCTCGCATGATCGTCGAGATGGTCGACTGG 1845 Query 145157 GGTCAACCCAAGAATGGCGCAGAGGAAGGCCGAGCCCAGTTCGGCGACCAGTTCCTCGGC 145216 || |||||| ||||| || | |||||| | || |||||||||||||||||| | Sbjct 1844 ---CAGCCCAAGTTCGGCGCCGATCATCGCCGAGGCGAGCTCGGCGACCAGTTCCTCGAC 1788 Query 145217 GGCGTAGGCCTCGTCCCCGAAGCGCTTGCCGAACTCGCGGTTCAGGCGGTCCTCGC-GAC 145275 |||||| || ||| ||||||||| || | | ||||| ||| ||| | ||| | | Sbjct 1787 GGCGTAAGCGTCGCTCCCGAAGCGAGCGCTCAGCGAGCGGTCCAGCCGG-CTTCGGTGCC 1729 Query 145276 CGGTCCAGTG 145285 |||||||||| Sbjct 1728 CGGTCCAGTG 1719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 690120500596800