Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_019406.1 Length=279967 Score E Sequences producing significant alignments: (Bits) Value seq1360 179 7e-40 seq2563 89.7 9e-13 seq104 87.8 3e-12 >seq1360 Length=3671 Score = 179 bits (198), Expect = 7e-40 Identities = 385/568 (68%), Gaps = 18/568 (3%) Strand=Plus/Minus Query 113546 CCAGGAAGGGGTTCTTCACGGGGAAGGAGCCCGACAGCGTCTTATGCAGATAGGCGTTGG 113605 |||| | |||||||| || | ||| ||||||||||||||| || ||| ||||| Sbjct 2129 CCAGATACGGGTTCTTGACCGCGAAACTGCCCGACAGCGTCTTGTGGGTGTAGATGTTGG 2070 Query 113606 CGCGCCACGGCTCGATCGACGGCGAGGTATTGCCGCAGAGGATAGACGACGACGCGTTGG 113665 | | ||||||||| | | |||||| |||||||| ||| || ||||||| ||| Sbjct 2069 CCGGGATCGGCTCGATGCAGGCCGAGGTGCCGCCGCAGATGATCGAGATCGACGCGGTGG 2010 Query 113666 GAGCGATCGCCATCTTGTGGGCGAAGCGCTCGCCCGTGCCGATCATGTCCGGCGCCTCG- 113724 | ||||||||||||||| | || ||||| | ||| |||||| | || ||| Sbjct 2009 GCGCGATCGCCATCTTGCACGAAAAACGCTCCATCACGCC---CATGTCGGCGGCGTCGG 1953 Query 113725 --------CCGCGTTCGGCGCCCAGCTTCAGAGAAGCGGCATCCGCCAGGGTGCGGATGT 113776 ||||| |||||| ||||| ||| || || || | || | | | || || Sbjct 1952 GGCAGGGGCCGCGCTCGGCGGCCAGCGTCATCGACGCCTGATTCACCTGCGCGTTGACGT 1893 Query 113777 GCTTGAAGAT-CGCACGGTTCACGTTGCGAGCCTTATGCGACTCGAACCGG-ATCATATG 113834 |||||||||| |||| ||||| | | ||| | ||| || | ||| | | | Sbjct 1892 GCTTGAAGATGCGCA-GGTTCCAGCTCTTCGCCATG-GCGCCTTCCATCGGCAGCCCGCG 1835 Query 113835 CTTCTGAAGATAGGCGTGGAAGCCCAGCAGGCCCAGGCCGACCGAACGCTCCTGCGTAGC 113894 | ||| || ||| ||||||||||| | ||||||||||||||| ||||| ||| || Sbjct 1834 CGCCTGGAGGAAGGAGTGGAAGCCCATGACGCCCAGGCCGACCGAGCGCTCGCGCGCCGC 1775 Query 113895 CGAGTAGATCGCGTAGGCCAACGCCGGCG-GAGCGTTGTCGATGAACACCTGGAGGCAGT 113953 || ||| |||| ||| ||||| | || |||||| | |||| || || Sbjct 1774 GGAATAGGCCGCGCGCTCCATGCCCGGCTCGTGCCG-GTCGATATAATCCTGCAGCACGT 1716 Query 113954 TGTCCAGCATACGCATCAGGTCTTCGATGAAGTGTGGGTCATCGACCCACTCGTCGAACT 114013 |||| || | ||||||| ||| |||||||| || ||| || ||||| ||| || Sbjct 1715 TGTCGAGGAAGCGCATCACGTCCTCGATGAACTGCTTGTCGTCCTTCCACTGGTCCCACG 1656 Query 114014 TCTCGGCGTTGACGCTCGACAGGCAGCAGACCGCCGTACGCTTCTTGCCTTGATCATCGC 114073 ||||| ||| | ||||||||||||||| || || || | ||||| ||| || Sbjct 1655 TCTCGAGGTTCAGCGACGACAGGCAGCAGACGGCGGTGCGATCGTTGCCCAGATGGTCCT 1596 Query 114074 GCCCGGTCGCCAGCGTGATCTCGGTGCA 114101 || |||| ||||||||||||| |||| Sbjct 1595 TGCCCGTCGGCAGCGTGATCTCGCTGCA 1568 >seq2563 Length=7248 Score = 89.7 bits (98), Expect = 9e-13 Identities = 124/171 (73%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 71168 GAGATCGTGCCCTTCGAGTTCATGCGCGGGCGCACCTTCGACAACGCCTTCGTGATCCTC 71227 ||||||| ||| | | ||||||||||||||||| | ||||||||||||| |||||| Sbjct 3494 GAGATCGCGCCTCTGGCATTCATGCGCGGGCGCACGCTGAACAACGCCTTCGTCATCCTC 3553 Query 71228 GACGAGGCTCAGAACGCGTCGTTCGACGACCTGGAACTGTTCGTGACCCGTACCGGTCAG 71287 |||||||| |||||| || || ||| | || | ||||| | ||||| | ||| | Sbjct 3554 GACGAGGCCCAGAACACGACGCCCGAGCAGATGAAGATGTTCCTCACCCGCATCGG-CTT 3612 Query 71288 GGTTCGCAAGT-CGTGATCTGCGGCGATCCCGGCCAGATCGACATCCCGAA 71337 | |||||| |||| | ||||| | ||||||||||| | || || Sbjct 3613 CGGCAGCAAGTGCGTGGTGACAGGCGACGTCAGCCAGATCGACCTGCCCAA 3663 >seq104 Length=626 Score = 87.8 bits (96), Expect = 3e-12 Identities = 74/90 (82%), Gaps = 2/90 (2%) Strand=Plus/Plus Query 132949 GCTCCAAGTTTGATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGG 133008 ||| ||||| || |||||||||||||| |||||||||||| ||||||||||| |||| Sbjct 539 GCTACAAGT--GACGCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGG 596 Query 133009 TCGAGGGTTCAAATCCCTCCCCCGCATCCA 133038 || ||||||||||| ||||||| ||| Sbjct 597 TCACAGGTTCAAATCCTGTCCCCGCAACCA 626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 895735899154080