Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_019406.1
Length=279967
Score E
Sequences producing significant alignments: (Bits) Value
seq1360 179 7e-40
seq2563 89.7 9e-13
seq104 87.8 3e-12
>seq1360
Length=3671
Score = 179 bits (198), Expect = 7e-40
Identities = 385/568 (68%), Gaps = 18/568 (3%)
Strand=Plus/Minus
Query 113546 CCAGGAAGGGGTTCTTCACGGGGAAGGAGCCCGACAGCGTCTTATGCAGATAGGCGTTGG 113605
|||| | |||||||| || | ||| ||||||||||||||| || ||| |||||
Sbjct 2129 CCAGATACGGGTTCTTGACCGCGAAACTGCCCGACAGCGTCTTGTGGGTGTAGATGTTGG 2070
Query 113606 CGCGCCACGGCTCGATCGACGGCGAGGTATTGCCGCAGAGGATAGACGACGACGCGTTGG 113665
| | ||||||||| | | |||||| |||||||| ||| || ||||||| |||
Sbjct 2069 CCGGGATCGGCTCGATGCAGGCCGAGGTGCCGCCGCAGATGATCGAGATCGACGCGGTGG 2010
Query 113666 GAGCGATCGCCATCTTGTGGGCGAAGCGCTCGCCCGTGCCGATCATGTCCGGCGCCTCG- 113724
| ||||||||||||||| | || ||||| | ||| |||||| | || |||
Sbjct 2009 GCGCGATCGCCATCTTGCACGAAAAACGCTCCATCACGCC---CATGTCGGCGGCGTCGG 1953
Query 113725 --------CCGCGTTCGGCGCCCAGCTTCAGAGAAGCGGCATCCGCCAGGGTGCGGATGT 113776
||||| |||||| ||||| ||| || || || | || | | | || ||
Sbjct 1952 GGCAGGGGCCGCGCTCGGCGGCCAGCGTCATCGACGCCTGATTCACCTGCGCGTTGACGT 1893
Query 113777 GCTTGAAGAT-CGCACGGTTCACGTTGCGAGCCTTATGCGACTCGAACCGG-ATCATATG 113834
|||||||||| |||| ||||| | | ||| | ||| || | ||| | | |
Sbjct 1892 GCTTGAAGATGCGCA-GGTTCCAGCTCTTCGCCATG-GCGCCTTCCATCGGCAGCCCGCG 1835
Query 113835 CTTCTGAAGATAGGCGTGGAAGCCCAGCAGGCCCAGGCCGACCGAACGCTCCTGCGTAGC 113894
| ||| || ||| ||||||||||| | ||||||||||||||| ||||| ||| ||
Sbjct 1834 CGCCTGGAGGAAGGAGTGGAAGCCCATGACGCCCAGGCCGACCGAGCGCTCGCGCGCCGC 1775
Query 113895 CGAGTAGATCGCGTAGGCCAACGCCGGCG-GAGCGTTGTCGATGAACACCTGGAGGCAGT 113953
|| ||| |||| ||| ||||| | || |||||| | |||| || ||
Sbjct 1774 GGAATAGGCCGCGCGCTCCATGCCCGGCTCGTGCCG-GTCGATATAATCCTGCAGCACGT 1716
Query 113954 TGTCCAGCATACGCATCAGGTCTTCGATGAAGTGTGGGTCATCGACCCACTCGTCGAACT 114013
|||| || | ||||||| ||| |||||||| || ||| || ||||| ||| ||
Sbjct 1715 TGTCGAGGAAGCGCATCACGTCCTCGATGAACTGCTTGTCGTCCTTCCACTGGTCCCACG 1656
Query 114014 TCTCGGCGTTGACGCTCGACAGGCAGCAGACCGCCGTACGCTTCTTGCCTTGATCATCGC 114073
||||| ||| | ||||||||||||||| || || || | ||||| ||| ||
Sbjct 1655 TCTCGAGGTTCAGCGACGACAGGCAGCAGACGGCGGTGCGATCGTTGCCCAGATGGTCCT 1596
Query 114074 GCCCGGTCGCCAGCGTGATCTCGGTGCA 114101
|| |||| ||||||||||||| ||||
Sbjct 1595 TGCCCGTCGGCAGCGTGATCTCGCTGCA 1568
>seq2563
Length=7248
Score = 89.7 bits (98), Expect = 9e-13
Identities = 124/171 (73%), Gaps = 2/171 (1%)
Strand=Plus/Plus
Query 71168 GAGATCGTGCCCTTCGAGTTCATGCGCGGGCGCACCTTCGACAACGCCTTCGTGATCCTC 71227
||||||| ||| | | ||||||||||||||||| | ||||||||||||| ||||||
Sbjct 3494 GAGATCGCGCCTCTGGCATTCATGCGCGGGCGCACGCTGAACAACGCCTTCGTCATCCTC 3553
Query 71228 GACGAGGCTCAGAACGCGTCGTTCGACGACCTGGAACTGTTCGTGACCCGTACCGGTCAG 71287
|||||||| |||||| || || ||| | || | ||||| | ||||| | ||| |
Sbjct 3554 GACGAGGCCCAGAACACGACGCCCGAGCAGATGAAGATGTTCCTCACCCGCATCGG-CTT 3612
Query 71288 GGTTCGCAAGT-CGTGATCTGCGGCGATCCCGGCCAGATCGACATCCCGAA 71337
| |||||| |||| | ||||| | ||||||||||| | || ||
Sbjct 3613 CGGCAGCAAGTGCGTGGTGACAGGCGACGTCAGCCAGATCGACCTGCCCAA 3663
>seq104
Length=626
Score = 87.8 bits (96), Expect = 3e-12
Identities = 74/90 (82%), Gaps = 2/90 (2%)
Strand=Plus/Plus
Query 132949 GCTCCAAGTTTGATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGG 133008
||| ||||| || |||||||||||||| |||||||||||| ||||||||||| ||||
Sbjct 539 GCTACAAGT--GACGCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGG 596
Query 133009 TCGAGGGTTCAAATCCCTCCCCCGCATCCA 133038
|| ||||||||||| ||||||| |||
Sbjct 597 TCACAGGTTCAAATCCTGTCCCCGCAACCA 626
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 895735899154080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |