Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_019407.1 Length=218929 Score E Sequences producing significant alignments: (Bits) Value seq1360 163 4e-35 seq1164 141 1e-28 >seq1360 Length=3671 Score = 163 bits (180), Expect = 4e-35 Identities = 431/648 (67%), Gaps = 24/648 (4%) Strand=Plus/Minus Query 83162 GAAGTGCTGGATCGAACCCTCGGCCGCGACGATCGACTTCCAGACCGCCTCGGTGTCCAG 83221 || |||||| | ||| || || ||| ||| || ||||||| || |||| | | Sbjct 2212 GAGGTGCTGCACCGACCCGCCGTGTTCGAGGATTGAGCTCCAGACGGCTTCGGAATTCTT 2153 Query 83222 GCCCAGTTCGCCCAGGCGCTTCTTCAGCCAGCGGTTCTTGACGGCGAACGAGCCCGACAG 83281 || | ||| || |||| | ||| | |||||||||| ||||| ||||||||| Sbjct 2152 GCTCTTCTCGTTGAGCAGCTTTTCCAGATACGGGTTCTTGACCGCGAAACTGCCCGACAG 2093 Query 83282 AGTCTTGTGCAGGAAGGTGTTGGCCGGGATCGGCTCGATCGACGGCGAGGTGCCCCCGCA 83341 |||||||| | || |||||||||||||||||||||| | | ||||||||| ||||| Sbjct 2092 CGTCTTGTGGGTGTAGATGTTGGCCGGGATCGGCTCGATGCAGGCCGAGGTGCCGCCGCA 2033 Query 83342 AAGGATCGAGGACGAGGCGTTGGGCGCCACGGCCAGCTTGTGGGCGAACCGCTCGCCCGT 83401 | ||||||| ||| ||| ||||||| | |||| |||| | || |||| || | Sbjct 2032 GATGATCGAGATCGACGCGGTGGGCGCGATCGCCATCTTGCACGAAAAACGCT---CCAT 1976 Query 83402 GCCTTCCATGTC--CGGCGCC-------TCGCCGCGCTCCTTGCCCAGCAGCAGGGAAGC 83452 | ||||||| ||||| | ||||||||| | ||||| || || || Sbjct 1975 CACGCCCATGTCGGCGGCGTCGGGGCAGGGGCCGCGCTCGGCGGCCAGCGTCATCGACGC 1916 Query 83453 CGCGTCGGCCTGCTTGCGCATGTGGACGAACAGTTCCAGGTT-CAGCCGGCGGGCGGCGT 83511 | | ||||| | | ||| ||| | |||||| |||| | | | Sbjct 1915 CTGATTCACCTGCGCGTTGACGTGCTTGAAGATGCGCAGGTTCCAGCTCTTCGCCATGGC 1856 Query 83512 GACTCTCGAACGGGATGTCCAGCATCTGGAGCAGCGAGTGGAAGCCGAGCAGGCCCAGGC 83571 | || || | ||| | | || |||||| | ||||||||||| | | |||||||| Sbjct 1855 GCCT-TCCATCGGCAGCCCGCGCGCCTGGAGGAAGGAGTGGAAGCCCATGACGCCCAGGC 1797 Query 83572 CCACCGACCGTTCGCGCACGGCGCTGTAGGCGGCGCGGTGCATCTCGTCCGGCGCGT--- 83628 | ||||| || |||||| | ||| ||||| ||||| | ||| | ||||| ||| Sbjct 1796 CGACCGAGCGCTCGCGCGCCGCGGAATAGGCCGCGCGCTCCAT---GCCCGGCTCGTGCC 1740 Query 83629 TGTCGATGAACACCTGGAGGCAGTTGTCCAGCATGCGCAGCAGGTCTTCGATGAAGGTCG 83688 |||||| | |||| || |||||| || | ||||| || ||| |||||||| | Sbjct 1739 GGTCGATATAATCCTGCAGCACGTTGTCGAGGAAGCGCATCACGTCCTCGATGAACTGCT 1680 Query 83689 GGTGATCCCGCCACTCCGGCCACTTCTCGGCGTTGACGCTGGAAAGGCAGCAGACGGCGG 83748 || ||| ||||| |||| ||||| ||| | || |||||||||||||||| Sbjct 1679 TGTCGTCCTTCCACTGGTCCCACGTCTCGAGGTTCAGCGACGACAGGCAGCAGACGGCGG 1620 Query 83749 TCCGCATC-TTGCCGAAGAT-GTCGCGGCCCGAGCCCAGCATGATCTC 83794 | || ||| ||||| |||| ||| ||||| |||| ||||||| Sbjct 1619 TGCG-ATCGTTGCC-CAGATGGTCCTTGCCCGTCGGCAGCGTGATCTC 1574 Score = 113 bits (124), Expect = 6e-20 Identities = 154/212 (73%), Gaps = 5/212 (2%) Strand=Plus/Minus Query 85303 GGCCGCGCGCGGACCCGCCGTTCGACAGCAGGGGCGTGGCGAACATGAACCAGAGGTTCG 85362 |||||||| ||| |||||||||||||||| ||||| ||| ||||||||| ||| || Sbjct 926 GGCCGCGCCCGGTGCCGCCGTTCGACAGCACCGGCGTTGCGGGCATGAACCACAGGCGCG 867 Query 85363 AGACATAGTCGTAGAGCCGCTGGCCGTGCTCGGCGTCATCCGCGAAGGCCGCACTCG-CG 85421 |||||||||| |||| ||||| ||||| ||||||| || || ||| ||| || || Sbjct 866 AGACATAGTCATAGATGCGCTGCGCGTGCGCGGCGTCGTCGGCATAGG-CGCTGGCGACG 808 Query 85422 CGCGCGAAGGCCTCCTGGGGCGAGCTTTCCCCAGGCAGCAGATAGCGTTCACGGAGGGTC 85481 || | ||| |||| | || ||| || |||||||||||||| || | | ||| Sbjct 807 CGGACAAAGAGATCCT---GATAGGATTCGCCCGGCAGCAGATAGCGGTCCTGCAACGTC 751 Query 85482 TGAAGGGTGAAGTCGTCGAGCAGGGCGTCGCG 85513 | | ||| ||| ||||| |||||||| Sbjct 750 TCCTTGCCGAAATCGGTCAGCAGCGCGTCGCG 719 >seq1164 Length=3258 Score = 141 bits (156), Expect = 1e-28 Identities = 342/509 (67%), Gaps = 23/509 (5%) Strand=Plus/Minus Query 82109 GGCTCTCGTCGCGGATCGACCACTCGACGATCGTGGTCATGCCCTTCATGCGGTTGCGGC 82168 ||||||||||||| | |||||| ||||||| |||||||||||| |||| || Sbjct 1293 GGCTCTCGTCGCGCACCGACCAGCTGACGATCTGCCCCATGCCCTTCATCTTGTTGAAGC 1234 Query 82169 GCTGGAAGGACATCAGCAGGGCGAAGGACGAGAAAAGCTGCATCCCCTCGCCGAAGGCCG 82228 || | ||| ||| |||| ||||| |||| ||| ||||||| |||||| |||| | Sbjct 1233 GCGGAAAGTTCATGAGCATCGCGAACGACGCGAACAGCTGCACGCCCTCGGTGAAGCCGC 1174 Query 82229 AGAACACGGCGATGTCGACCATCAGGTCGGCGATCGAGTTGCCGCTGTC----CCGA--T 82282 ||||| ||||| | || || ||||| | ||||||| |||| | Sbjct 1173 CGAACATGGCGAG------CGTCCGG---GCGATATCCTCATCGCTGTCGACGCCGAAGT 1123 Query 82283 TGAACATGTACTCGTGCTTTTCGCGCATCGCCTCGTAGTCGAGGAAGGCGCGGAACTCGA 82342 | |||||| || ||||| || || | | | || |||||||| |||| | ||| Sbjct 1122 TCTGCATGTAATCATGCTTGTCCTTCAGCTCGGCATATTCGAGGAACGCGCCATATTCGC 1063 Query 82343 CCTCGGGCAGGCCCAGGGTGTCGATCAGCGTCGA-GTAGGCGTCGATGTGGTTGGCCTCG 82401 || |||| ||| | ||||||| ||| || | |||||| ||||||| | || Sbjct 1062 TTTCCGGCATGCCGATCGTGTCGAGCAG-GTGGCTGTAGGCCGCGATGTGCACCGTTTCC 1004 Query 82402 GCGGCGATGAACGCGCCCAGCATCATCCGCACTTCCGGGTGCGGGAAG-CGCGGGCCGTA 82460 | | |||||||| |||||||||| | || | || ||| ||||| ||||| Sbjct 1003 ATGTTGCTGAACGCGGTCAGCATCATCTTGATCTCGGTCGGCTTGAACACGCGG-CCGTA 945 Query 82461 CTTCTCGAAGTAGCCGCGCGCCACGTCGACGTCGGCCTGGGTGAAGAACCGGAAGAGTTG 82520 |||||| |||| | ||| ||||| || |||||||||||||| ||||||| || Sbjct 944 TTTCTCGTGATAGCAATCCTGCACCTCGACATCCGCCTGGGTGAAGAAGCGGAAGATCTG 885 Query 82521 CGTCAGCAGGGACTTCTCGT--TCGGCGTCAGCTTCTCGTTCCAGTCCTGGATGTCCTGG 82578 |||||||||| ||||| ||| |||||||||| ||| || || |||| | Sbjct 884 CGTCAGCAGGTTGCGCTCGTGATCG--GTCAGCTTCTGCGCCCAATCACGGCAATCCTCG 827 Query 82579 TCCATGGGGGCTTCGTGCGGAAGCCAGTG 82607 ||| || |||| | || |||||||| Sbjct 826 CCCAGCGGCACTTCCTCAGGCAGCCAGTG 798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 700420949854560