Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_019408.1 Length=223720 Score E Sequences producing significant alignments: (Bits) Value seq1360 174 2e-38 seq1164 147 3e-30 >seq1360 Length=3671 Score = 174 bits (192), Expect = 2e-38 Identities = 380/559 (68%), Gaps = 30/559 (5%) Strand=Plus/Minus Query 84636 GGTTCTTGACCTGGAACGAACCCGAGAGGGTCTTGTGCAGGAAGGTGTTGGCGCGGTTGG 84695 ||||||||||| ||| ||||| || |||||||| | || ||||||| || | | Sbjct 2120 GGTTCTTGACCGCGAAACTGCCCGACAGCGTCTTGTGGGTGTAGATGTTGGCCGGGATCG 2061 Query 84696 GCTCGATCGACGGCGAAGCGCCGCCGCAGAGGATCGACGAGGAGGCGTTGGGGGCCACCG 84755 ||||||| | | ||| | ||||||||||| |||||| || ||| |||| || | || Sbjct 2060 GCTCGATGCAGGCCGAGGTGCCGCCGCAGATGATCGAGATCGACGCGGTGGGCGCGATCG 2001 Query 84756 CCAGCTTGTGGGCGAAGCGCTCGCCCGAGCCTTCCATGTCAGGGGCCTCG---------C 84806 ||| |||| | || ||||| | ||| |||||| | ||| ||| | Sbjct 2000 CCATCTTGCACGAAAAACGCTCCATCACGCC---CATGTCGGCGGCGTCGGGGCAGGGGC 1944 Query 84807 CGCGCTCGGCGCCCAGGACCAGCGACGCCGCGTCGGCCTT-GCGGCGCATGTGGCGGAAG 84865 ||||||||||| |||| || ||||||| | ||| ||| | | ||| |||| Sbjct 1943 CGCGCTCGGCGGCCAGCGTCATCGACGCCTGATTCACCTGCGCGTTG-ACGTGCTTGAAG 1885 Query 84866 ATGGTCTTATTG-AGCGTCTCGGCCGCCATG---CTCTCGAACGGGATGTCGAGCGACTG 84921 ||| | || ||| ||| ||||||| | || | ||| | || ||| ||| Sbjct 1884 ATGCGCAGGTTCCAGC-TCTT---CGCCATGGCGCCTTCCATCGGCAGCCCGCGCGCCTG 1829 Query 84922 GAGCAGCGAGTGGAAGCCCAGCAGGCCCAGGCCCACCGAGCGCTCGCGCACGGCGCTGTA 84981 ||| | ||||||||||||| | ||||||||| ||||||||||||||| | ||| || Sbjct 1828 GAGGAAGGAGTGGAAGCCCATGACGCCCAGGCCGACCGAGCGCTCGCGCGCCGCGGAATA 1769 Query 84982 GGAGGCCCGGTGCATCTCGTCCGGCGCGTT---GTCGATGAACACCTGGAGGCAGTTGTC 85038 || || || | ||| | ||||| ||| |||||| | |||| || |||||| Sbjct 1768 GGCCGCGCGCTCCAT---GCCCGGCTCGTGCCGGTCGATATAATCCTGCAGCACGTTGTC 1712 Query 85039 CAGCATGCGCATCAGGTCTTCGATGAAGGTCGGGTGATCCTTCCATTCGACCCACTTTTC 85098 || | |||||||| ||| |||||||| | || |||||||| | | ||||| | || Sbjct 1711 GAGGAAGCGCATCACGTCCTCGATGAACTGCTTGTCGTCCTTCCACTGGTCCCACGTCTC 1652 Query 85099 GGCGTTGACGCTCGACAGGCAGCAGACGGCCGTGCGCATC-TTGCCGAACACGTCGCGGC 85157 | ||| | |||||||||||||||||| ||||| ||| ||||| | ||| || Sbjct 1651 GAGGTTCAGCGACGACAGGCAGCAGACGGCGGTGCG-ATCGTTGCCCAGATGGTCCTTGC 1593 Query 85158 CGGTGCCCAGCATGATCTC 85176 | || |||| ||||||| Sbjct 1592 CCGTCGGCAGCGTGATCTC 1574 Score = 98.7 bits (108), Expect = 1e-15 Identities = 151/212 (71%), Gaps = 5/212 (2%) Strand=Plus/Minus Query 86691 GGCCACGGGCCGAGCCGCCGTTCGACAGCAGCGGGGTGGCGTACATGAACCAGAGGTTCG 86750 |||| || | | ||||||||||||||||| ||| || ||| ||||||||| ||| || Sbjct 926 GGCCGCGCCCGGTGCCGCCGTTCGACAGCACCGGCGTTGCGGGCATGAACCACAGGCGCG 867 Query 86751 AGACGTATTCGTACAGACGCTGGCCGTGCTCGGCGTCATCCGCAAAGGCCGCACTCG-CG 86809 |||| || || || | ||||| ||||| ||||||| || ||| ||| ||| || || Sbjct 866 AGACATAGTCATAGATGCGCTGCGCGTGCGCGGCGTCGTCGGCATAGG-CGCTGGCGACG 808 Query 86810 CGCGCGAAGGCCTCCTGGGGGGAAGTTTCCCCAGGCAGCAGATAGCGTTCACGGAGGGTC 86869 || | ||| ||||| ||| ||| || |||||||||||||| || | | ||| Sbjct 807 CGGACAAAGAGATCCTGATAGGA---TTCGCCCGGCAGCAGATAGCGGTCCTGCAACGTC 751 Query 86870 TGAAGGGTGAAGTCGTCGAGCAGGGCGTCGCG 86901 | | ||| ||| ||||| |||||||| Sbjct 750 TCCTTGCCGAAATCGGTCAGCAGCGCGTCGCG 719 >seq1164 Length=3258 Score = 147 bits (162), Expect = 3e-30 Identities = 552/849 (65%), Gaps = 40/849 (5%) Strand=Plus/Minus Query 83246 GTAGTTGGGCTTCATGCCCAGTTGCAGCCACCGGCGGTCGGCGATGTAGCGGATGTACTT 83305 |||| | ||||||| ||||| ||| ||| | |||||||||||||||||| ||||| Sbjct 1535 GTAGATCGGCTTCAGCCCCAGCTGCCCTAGCCGCCAGTCGGCGATGTAGCGGATATACTT 1476 Query 83306 CTTGGTGTCCTCGGGCGTGACGCCGTCGACCTCGCCCAGGGCGAAGGCTTGGTCGATGAA 83365 |||| | |||| |||||| | ||||| ||| |||| ||||||| |||||||||| Sbjct 1475 CTTGATATCCTTGGGCGTCATGCCGTTCACCGGCCCCATCTCGAAGGCGAGGTCGATGAA 1416 Query 83366 GGCGTCTTCCAGGTCGACCATCCGGCGGCCGGCGTCGTAGATGCGCTTCTTGGTCTCGTC 83425 ||| || || || | ||| | ||| ||| | ||| | | | Sbjct 1415 ATTGTCCTCGAGCCGGATGGTGGTCTGGCACACATCGGCAATGTCGTCCTTCACCGCCTT 1356 Query 83426 GTTCCAGGCGCGCGGGTGCTCCTTGATCAACTCGTGCAGGAGCTTGATCATGCTCTCGAC 83485 | | ||| || | | |||||| | || |||| | | ||| |||| |||| Sbjct 1355 GGT-CAG--GCACTGACGCTCCTGGCAGAAGGCGTGGAACATGCGGATGATGCCCTCGCA 1299 Query 83486 GTGGTGGGTCTCGTCGCGGATCGACCACTCGACGATCGTGGTCATGCCCTTCATCAGGCC 83545 || || |||||||||| | |||||| ||||||| ||||||||||||| | Sbjct 1298 ATGCAGGCTCTCGTCGCGCACCGACCAGCTGACGATCTGCCCCATGCCCTTCATCTTGTT 1239 Query 83546 GCGCCGCTGGTAGTTCATCAGCAGGGCGAACGAGGAGAAAAGCTGCATGCCTTCGCCGAA 83605 | ||| | ||||||| |||| |||||||| | ||| ||||||| ||| ||| ||| Sbjct 1238 GAAGCGCGGAAAGTTCATGAGCATCGCGAACGACGCGAACAGCTGCACGCCCTCGGTGAA 1179 Query 83606 GGCCGAGAACACGGCGATGTCGACGATCAGGTCGGCGATCGACGTGCCGCTCTCG-CGCT 83664 | | ||||| ||||| || || | |||||| | |||| ||| ||| Sbjct 1178 GCCGCCGAACATGGCGA--GCG----TCCG---GGCGATATCCTCATCGCTGTCGACGC- 1129 Query 83665 CGAA------CATGTACTCGTGCTTTTCACGCATCGCCTGATAGTCCAGGAAGGCGCGGA 83718 |||| |||||| || ||||| || || | | ||| || ||||| |||| Sbjct 1128 CGAAGTTCTGCATGTAATCATGCTTGTCCTTCAGCTCGGCATATTCGAGGAACGCGCCAT 1069 Query 83719 ACTCGACCTCGGGCAGGCCCAGGGTGTCGATCAGGGTGGC-GTAGGCGNNNNNNNNNNNN 83777 | ||| || |||| ||| | ||||||| || |||||| |||||| Sbjct 1068 ATTCGCTTTCCGGCATGCCGATCGTGTCGAGCA-GGTGGCTGTAGGCCGCGATGTGCACC 1010 Query 83778 NNNTC--GGCCGCCATGAACGAGGCCAGCATCATCCGCACCTCCGGGTGCGGGAA-GCGC 83834 || | || |||||| || |||||||||| | ||| | || ||| ||| Sbjct 1009 GTTTCCATGTTGC--TGAACGCGGTCAGCATCATCTTGATCTCGGTCGGCTTGAACACGC 952 Query 83835 GGGCCGTACTTTTCGAAGTAGCCGCGCGCCACATCGACGTCGGCCTGGGTGAAGAAGCGG 83894 ||||||| || ||| |||| | ||| ||||| || |||||||||||||||||| Sbjct 951 -GGCCGTATTTCTCGTGATAGCAATCCTGCACCTCGACATCCGCCTGGGTGAAGAAGCGG 893 Query 83895 AAGAGTTGCGTAAGCTGGTTCTTCTCGCTGGGC-TTGAGCTTCTCGTTCCAGTCCTGGAT 83953 |||| ||||| ||| |||| |||| || | | ||||||| ||| || || Sbjct 892 AAGATCTGCGTCAGCAGGTTGCGCTCG-TGATCGGTCAGCTTCTGCGCCCAATCACGGCA 834 Query 83954 GTCGGTGTCCATCGGCGCCTCGTGGGGGAGCCAGTGGAGCGATTGCATGA----TCCGGT 84009 || | ||| |||| | || | || |||||||||||| ||| ||| ||| | Sbjct 833 ATCCTCGCCCAGCGGCACTTCCTCAGGCAGCCAGTGGAGCTGCTGC-TGACGCTTCCAAT 775 Query 84010 AGGCGTCGTAGGCCCAGGGGTAGGCGAAGGGCTTGTAGTAGTCGCGCGGCTTG-AGCAGG 84068 | ||| | |||||||| || |||| |||||||| | | | | |||||| || ||| Sbjct 774 A---TTCGAACGCCCAGGGATATTCGAAAGGCTTGTACTGCTTG-GAGGCTTGAAGGAGG 719 Query 84069 GACATGTGT 84077 | |||| || Sbjct 718 GGCATGGGT 710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715751627827200