Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_019410.1 Length=221828 Score E Sequences producing significant alignments: (Bits) Value seq1360 167 3e-36 seq1164 138 2e-27 >seq1360 Length=3671 Score = 167 bits (184), Expect = 3e-36 Identities = 432/648 (67%), Gaps = 24/648 (4%) Strand=Plus/Minus Query 84571 GAAGTGCTGGATCGAGCCCTCGGCCGCGACGATCGACTTCCAGACCGCCTCGGTGTCCAG 84630 || |||||| | ||| || || ||| ||| || ||||||| || |||| | | Sbjct 2212 GAGGTGCTGCACCGACCCGCCGTGTTCGAGGATTGAGCTCCAGACGGCTTCGGAATTCTT 2153 Query 84631 GCCCAGTTCGCCCAGGCGCTTCTTCAGCCAGCGGTTCTTGACGGCGAACGAGCCCGACAG 84690 || | ||| || |||| | ||| | |||||||||| ||||| ||||||||| Sbjct 2152 GCTCTTCTCGTTGAGCAGCTTTTCCAGATACGGGTTCTTGACCGCGAAACTGCCCGACAG 2093 Query 84691 GGTCTTGTGCAGGAAGGTGTTGGCCGGGATCGGCTCGATCGACGGCGAGGTGCCCCCGCA 84750 |||||||| | || |||||||||||||||||||||| | | ||||||||| ||||| Sbjct 2092 CGTCTTGTGGGTGTAGATGTTGGCCGGGATCGGCTCGATGCAGGCCGAGGTGCCGCCGCA 2033 Query 84751 GAGGATCGAGGACGAGGCGTTGGGCGCCACGGCCAGCTTGTGGGCGAACCGCTCGCCCGT 84810 || ||||||| ||| ||| ||||||| | |||| |||| | || |||| || | Sbjct 2032 GATGATCGAGATCGACGCGGTGGGCGCGATCGCCATCTTGCACGAAAAACGCT---CCAT 1976 Query 84811 GCCTTCCATGTC--CGGCGCC-------TCGCCGCGCTCCTTGCCCAGCAGCAGGGAAGC 84861 | ||||||| ||||| | ||||||||| | ||||| || || || Sbjct 1975 CACGCCCATGTCGGCGGCGTCGGGGCAGGGGCCGCGCTCGGCGGCCAGCGTCATCGACGC 1916 Query 84862 CGCGTCGGCCTGCTTGCGCATGTGGACGAACAGTTCCAGGTT-CAGCCGGCGGGCGGCGT 84920 | | ||||| | | ||| ||| | |||||| |||| | | | Sbjct 1915 CTGATTCACCTGCGCGTTGACGTGCTTGAAGATGCGCAGGTTCCAGCTCTTCGCCATGGC 1856 Query 84921 GACTCTCGAACGGGATGTCCAGCATCTGGAGCAGCGAGTGGAAGCCGAGCAGGCCCAGGC 84980 | || || | ||| | | || |||||| | ||||||||||| | | |||||||| Sbjct 1855 GCCT-TCCATCGGCAGCCCGCGCGCCTGGAGGAAGGAGTGGAAGCCCATGACGCCCAGGC 1797 Query 84981 CCACCGACCGTTCGCGCACGGCGCTGTAGGCGGCGCGGTGCATCTCGTCCGGCGCGT--- 85037 | ||||| || |||||| | ||| ||||| ||||| | ||| | ||||| ||| Sbjct 1796 CGACCGAGCGCTCGCGCGCCGCGGAATAGGCCGCGCGCTCCAT---GCCCGGCTCGTGCC 1740 Query 85038 TGTCGATGAACACCTGGAGGCAGTTGTCCAGCATGCGCAGCAGGTCTTCGATGAAGGTCG 85097 |||||| | |||| || |||||| || | ||||| || ||| |||||||| | Sbjct 1739 GGTCGATATAATCCTGCAGCACGTTGTCGAGGAAGCGCATCACGTCCTCGATGAACTGCT 1680 Query 85098 GGTGATCCCGCCACTCCGGCCACTTCTCGGCGTTGACGCTGGAGAGGCAGCAGACGGCGG 85157 || ||| ||||| |||| ||||| ||| | || |||||||||||||||| Sbjct 1679 TGTCGTCCTTCCACTGGTCCCACGTCTCGAGGTTCAGCGACGACAGGCAGCAGACGGCGG 1620 Query 85158 TCCGCATC-TTGCCGAAGAT-GTCGCGGCCCGAGCCCAGCATGATCTC 85203 | || ||| ||||| |||| ||| ||||| |||| ||||||| Sbjct 1619 TGCG-ATCGTTGCC-CAGATGGTCCTTGCCCGTCGGCAGCGTGATCTC 1574 Score = 113 bits (124), Expect = 6e-20 Identities = 154/212 (73%), Gaps = 5/212 (2%) Strand=Plus/Minus Query 86712 GGCCGCGCGCGGACCCGCCGTTCGACAGCAGGGGCGTGGCGAACATGAACCAGAGGTTCG 86771 |||||||| ||| |||||||||||||||| ||||| ||| ||||||||| ||| || Sbjct 926 GGCCGCGCCCGGTGCCGCCGTTCGACAGCACCGGCGTTGCGGGCATGAACCACAGGCGCG 867 Query 86772 AGACATAGTCGTAGAGCCGCTGGCCGTGCTCGGCGTCATCCGCGAAGGCCGCACTCG-CG 86830 |||||||||| |||| ||||| ||||| ||||||| || || ||| ||| || || Sbjct 866 AGACATAGTCATAGATGCGCTGCGCGTGCGCGGCGTCGTCGGCATAGG-CGCTGGCGACG 808 Query 86831 CGCGCGAAGGCCTCCTGGGGCGAGCTTTCCCCAGGCAGCAGATAGCGTTCACGGAGGGTC 86890 || | ||| |||| | || ||| || |||||||||||||| || | | ||| Sbjct 807 CGGACAAAGAGATCCT---GATAGGATTCGCCCGGCAGCAGATAGCGGTCCTGCAACGTC 751 Query 86891 TGAAGGGTGAAGTCGTCGAGCAGGGCGTCGCG 86922 | | ||| ||| ||||| |||||||| Sbjct 750 TCCTTGCCGAAATCGGTCAGCAGCGCGTCGCG 719 >seq1164 Length=3258 Score = 138 bits (152), Expect = 2e-27 Identities = 339/507 (67%), Gaps = 19/507 (4%) Strand=Plus/Minus Query 83518 GGCTCTCGTCGCGGATCGACCACTCGACGATCGTGGTCATGCCCTTCATGCGGTTGCGGC 83577 ||||||||||||| | |||||| ||||||| |||||||||||| |||| || Sbjct 1293 GGCTCTCGTCGCGCACCGACCAGCTGACGATCTGCCCCATGCCCTTCATCTTGTTGAAGC 1234 Query 83578 GCTGGAAGGACATCAGCAGGGCGAAGGACGAGAAAAGCTGCATCCCCTCGCCGAAGGCCG 83637 || | ||| ||| |||| ||||| |||| ||| ||||||| |||||| |||| | Sbjct 1233 GCGGAAAGTTCATGAGCATCGCGAACGACGCGAACAGCTGCACGCCCTCGGTGAAGCCGC 1174 Query 83638 AGAACACGGCGATGTCGACCATCAGGTCGGCGATCGAGTTGCCGCTGTC----CCGA--T 83691 ||||| ||||| | || || ||||| | ||||||| |||| | Sbjct 1173 CGAACATGGCGAG------CGTCCGG---GCGATATCCTCATCGCTGTCGACGCCGAAGT 1123 Query 83692 TGAACATGTACTCGTGCTTCTCGCGCATCGCCTCGTAGTCGAGGAAGGCGCGGAACTCGA 83751 | |||||| || ||||| || || | | | || |||||||| |||| | ||| Sbjct 1122 TCTGCATGTAATCATGCTTGTCCTTCAGCTCGGCATATTCGAGGAACGCGCCATATTCGC 1063 Query 83752 CCTCGGGCAGGCCCAGGGTGTCGATCAGCGTCGA-GTAGGCGTCGATGTGGTTGGCCTCG 83810 || |||| ||| | ||||||| ||| || | |||||| ||||||| | || Sbjct 1062 TTTCCGGCATGCCGATCGTGTCGAGCAG-GTGGCTGTAGGCCGCGATGTGCACCGTTTCC 1004 Query 83811 GCGGCGATGAACGCGCCCAGCATCATCCGCACTTCCGGGTGCGGGAAG-CGCGGGCCGTA 83869 | | |||||||| |||||||||| | || | || ||| ||||| ||||| Sbjct 1003 ATGTTGCTGAACGCGGTCAGCATCATCTTGATCTCGGTCGGCTTGAACACGCGG-CCGTA 945 Query 83870 CTTCTCGAAGTAGCCGCGCGCCACGTCGACGTCGGCCTGGGTGAAGAACCGGAAGAGTTG 83929 |||||| |||| | ||| ||||| || |||||||||||||| ||||||| || Sbjct 944 TTTCTCGTGATAGCAATCCTGCACCTCGACATCCGCCTGGGTGAAGAAGCGGAAGATCTG 885 Query 83930 CGTCAGCAGGGACTTCTCGTCCGGCGTCAGCTTCTCGTTCCAGTCCTGGATGTCCTGGTC 83989 |||||||||| ||||| |||||||||| ||| || || |||| | | Sbjct 884 CGTCAGCAGGTTGCGCTCGTGATCGGTCAGCTTCTGCGCCCAATCACGGCAATCCTCGCC 825 Query 83990 CATGGGGGCTTCGTGCGGAAGCCAGTG 84016 || || |||| | || |||||||| Sbjct 824 CAGCGGCACTTCCTCAGGCAGCCAGTG 798 Score = 84.2 bits (92), Expect = 3e-11 Identities = 129/184 (70%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 83101 CGCCCTTGCCGTACTCCGTCGAGCGCTGCTCGAAGAAGTTGGTGTGGGTCGGGGCGTTCA 83160 || ||||| || ||||| | ||| ||||||||||| | || | | |||||| Sbjct 1635 CGGCCTTGGAATATTCCGTGGCGCGGGTTTCGAAGAAGTTCGCATGCTCCACGCCGTTCA 1576 Query 83161 TGATCCAGTCGAGCCAGTCGAACGGATTGTCCTTGACGCCGTAGTTGGGCTTCAGGCCCA 83220 | | | |||||| || ||||| || | || |||| | |||||||| |||| Sbjct 1575 GCAGCGGGGTGAGCCACGGGATCGGATGTTCGTCGATCATGTAGATCGGCTTCAGCCCCA 1516 Query 83221 GTTGCAGCAGCCGGCGGTCGGCGATGTAGCGGATGTACTGCTTGGTGTCCTCGGGCGTGA 83280 | ||| ||||| | |||||||||||||||||| |||| |||| | |||| |||||| | Sbjct 1515 GCTGCCCTAGCCGCCAGTCGGCGATGTAGCGGATATACTTCTTGATATCCTTGGGCGTCA 1456 Query 83281 CGCC 83284 ||| Sbjct 1455 TGCC 1452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 709697433979520