Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq2704 149 1e-30 seq2528 98.7 2e-15 >seq2704 Length=633058 Score = 149 bits (164), Expect = 1e-30 Identities = 323/489 (66%), Gaps = 5/489 (1%) Strand=Plus/Minus Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTT 25893 |||||||| |||||| | |||| | || |||| | |||| || || |||||| Sbjct 56637 TGGGCCATTCGATGGATCCAAGACCAGGAATCAACTTTTGCCCAGCGCCTTGTTGCCTTT 56578 Query 25894 GCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAG 25953 || || || ||||| ||||||||||| || || ||||| | ||||||||||| ||| || Sbjct 56577 GCAGCCGTTGAGGGTATCTTTTTCAGTGGCTCTTTTGCCTCTATCTTCTGGCTGAAGAAG 56518 Query 25954 AAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTC 26013 || ||||| || || ||| ||||| || || || | | |||||||| ||| Sbjct 56517 CGTGGCCTTATGCCTGGCCTCACCTTCTCCAATGAACTGATTTCCCGCGACGAGGGCCTC 56458 Query 26014 CACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCAAGAG 26073 |||| || |||||||| || |||| | | ||| | | ||| || | || Sbjct 56457 CACACTGACTTTGCCTGTCTTCTCTTCTC---TCACCTTCGTCACCGCCCGAGCCCCCAG 56401 Query 26074 ACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNNNNNN 26133 ||||| | | | |||| ||| ||||| |||||||| || || || Sbjct 56400 GCCGTCGAGGCTGTTATCACAGAAGCTGTCGAGATCGAAAAAGAATTCTTGACCGATGCC 56341 Query 26134 NNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGTATGTG 26193 | ||||||||| || ||||||| |||||||||| |||| ||| Sbjct 56340 CTTCCTTGCGCCCTTCTCGGCATGAACTCCAAACTCATGTGCCAATACATCGAGTTTGTC 56281 Query 26194 GCCGACCATCTGC-TGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAACCCGTT 26252 |||||| ||| ||| | ||| | | || ||| | | || | ||||| || Sbjct 56280 GCCGACAGGTTGCTTGTCGCTCTTGGTAATAAGAAG-TACTATAATGCGACGAACCCATT 56222 Query 26253 CGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGGTCGG 26312 |||||| ||||| ||||| ||| || || ||||| ||||||||||| ||| | ||||| Sbjct 56221 CGACTTCATGGACAACATTTCGCTGTCCGGTAAGACAAACTTCTTTGAGAAGCGCGTCGG 56162 Query 26313 CGACTATCA 26321 |||||| || Sbjct 56161 CGACTACCA 56153 >seq2528 Length=594046 Score = 98.7 bits (108), Expect = 2e-15 Identities = 331/503 (66%), Gaps = 18/503 (4%) Strand=Plus/Minus Query 222032 ACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGC 222091 |||| || ||| || | || ||| |||| || || |||||||||| | | | | Sbjct 61374 ACCCGCTTCATAAACAAATCTGGGGTCCAGAGAGCAAGAAAGAGATCACGAGCTCTCACT 61315 Query 222092 TCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGC 222151 ||||| |||| |||||| | ||||||||||| || || || || | |||||| || Sbjct 61314 TCCTCTTTTCCGTGGTTTTTACGGAGATCCAAAAATTCGAAGATATCGGAGTGCCAGGGT 61255 Query 222152 TCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCC 222211 || ||||||| ||| | || || ||||| || ||||||||||| | || ||| | Sbjct 61254 TCAAGATAGATGGCGAAGGCACCTGGTCGTTTATTGCCACCCTGGT-CAACATAGCGAGC 61196 Query 222212 AGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTT 222270 || | |||||||| || || | || | | |||||| || || || || || Sbjct 61195 AGTGTTGTTGAAGACACGGAGCATGGGGATGATTCCGTTAGAGGAGCCATTTGTTCCTGC 61136 Query 222271 AATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACAT----GCCGATACCACCGGCGT 222326 |||||| | || ||| | || ||| || |||| || |||||||| || | Sbjct 61135 AATGTAGGAGCCAGTGGCAC---GGATAC-GGTGTACATTAAGACCAATACCACCAGC-T 61081 Query 222327 GT-TTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCC 222385 || || || |||| || ||| | ||||| || || ||| || || ||| |||||| Sbjct 61080 GTCTTGGAAATCAGTGCACAGGTTTTGAGCGTATCGTAGATACCTTCGATACTATCCTCC 61021 Query 222386 TTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGA--ACAGGCGTTAAACA 222443 || | || | || ||||| || | ||| || | | ||||| | ||||| || | Sbjct 61020 TTCATGTCGATGAGGAAACAGGATGCCATTTGTGGCT--GTGGAGTTCCCGCGTTGAAAA 60963 Query 222444 GCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCTA-CGACT 222502 | |||||| ||||| || ||| | ||||||| || ||| || || | || || Sbjct 60962 GAGTGGGAGAAGCGTGAGTGAAGAATTTTTGGGACATCAAATTGTAAGTTTCAATCGCCT 60903 Query 222503 CTGGCGATGTTGTCCCCGTGAAT 222525 | | |||| || |||||||| Sbjct 60902 -TCTCAATGTCCTCGCCGTGAAT 60881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928813172834560