Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_019544.1
Length=49335
Score E
Sequences producing significant alignments: (Bits) Value
seq2071 178 4e-40
seq1636 123 8e-24
>seq2071
Length=31734
Score = 178 bits (196), Expect = 4e-40
Identities = 465/707 (66%), Gaps = 12/707 (2%)
Strand=Plus/Minus
Query 45521 GTGTTCGGCCGTCAGCTGCGCTTTAACTTGCAGGACGGATTCCCGCTCGTGACGACGAAA 45580
||||||||| ||| |||| || || || | || || |||||||| ||||| || ||
Sbjct 12022 GTGTTCGGCTACCAGATGCGGTTCGACCTGAACGATGGCTTCCCGCTGGTGACCACCAAG 11963
Query 45581 AAGTTGCATATCCGCTCGATCATTTATGAACTGCTCTGGTTTTTAAAAGGCGATACGAAT 45640
||| | || | || ||||| | || ||||| ||||| | | ||| | |
Sbjct 11962 AAGGTCCACCTGAAATCCATCATCCACGAGCTGCTGTGGTTCCTGGAGGGCTCGAGCGAC 11903
Query 45641 GTTCGCTATTTGCAGGAGAATGGTGTGACGATTTGGGACGAGTGGGCCGATGAAAACGGC 45700
| | ||| ||| || ||||| || |||||||| ||||| || |||||
Sbjct 11902 AACAACAAGCTGCGCGAGCGCGGCGTGACCATCTGGGACGAATGGGCGCGCGAGGACGGC 11843
Query 45701 GATCTCGGCCCAATCTACGGCGCGCAATGGCGGTCGTGG---AAAGGGGCTGACGGGAAA 45757
|| || || || | ||||||| ||| ||||| ||| | | | | |||| |
Sbjct 11842 GACCTGGGGCCGGTGTACGGCGTGCAGTGGCGCAGCTGGCCGACACCCGACGGCGGGCAC 11783
Query 45758 ACGGTCGACCAAATTGCGGCGGTCTTTAAGGAAATCAAGCGCAACCCGAACTCGCGGCGG 45817
| ||||||| || || | | | ||| |||||| ||| ||| ||||||| ||
Sbjct 11782 A---TCGACCAGATCGCCGAAGCGGTGAAGACCATCAAGGCCAATCCGGACTCGCGCCGC 11726
Query 45818 TTGCTTGTGAGCGCGTGGAACGTGGCAAAGTTGGGGGAAATGAAGTTGCCCCCATGTCAT 45877
| | || ||||| ||||||||||| | | | | ||| | || | || || ||
Sbjct 11725 ATCATCGTCAGCGCCTGGAACGTGGCGGACATCCCGAAGATGGCGCTGGCGCCCTGCCA- 11667
Query 45878 TACGC---CTTTCAGTTTTACGTCGCGAATGGCCGGTTGTCATGCATGTGGCAACAGCGT 45934
||| ||| ||||| ||||||||| | ||| | |||| ||| | | | |||||
Sbjct 11666 --CGCGTTCTTCCAGTTCTACGTCGCGGACGGCAAGCTGTCGTGCCAGCTGTACCAGCGC 11609
Query 45935 TCTGTCGATACATTTCTAGGATTGCCGTTTAACATCGCTAGCTATGCGCTGTTGACACAT 45994
|| ||| | || || || ||||||| |||||||| ||||| ||||| | || ||
Sbjct 11608 AGTGCCGACATCTTCCTGGGCGTGCCGTTCAACATCGCCAGCTACGCGCTACTCACGCAC 11549
Query 45995 ATGGTTGCCCAACAATGCGACCTCGATGTCGGCGAACTCATTTTCACCGGCGGCGACGTC 46054
||| | || || || |||||||| | |||||||| |||| | |||||||||||| |
Sbjct 11548 ATGATCGCGCAGCAGTGCGACCTGGCGGTCGGCGACTTCATCTGGACCGGCGGCGACTGC 11489
Query 46055 CATTTGTACAAAAATCATCTGGAACAAGCGAAACTGCAGCTGACGCGCGAGCCGCGCCCG 46114
|| | |||| || || | || || | | |||||||||| | ||| |||| | ||
Sbjct 11488 CACATCTACAGCAACCACCACGAGCAGGTGGAACTGCAGCTCTCCCGCCAGCCCCATCCC 11429
Query 46115 CTGCCGAAGCTCGTGATCAAACGGAAGCCGCCGTCTATCTTTGACTATGAATACGAGGAT 46174
|| ||| | ||||| || |||||| |||| ||||| ||||| ||||||||
Sbjct 11428 TACCCCGTGCTGGACATCAAGCGCAAGCCGGCGTCGATCTTCGACTACCGGTACGAGGAC 11369
Query 46175 TTTGAATTTGTCGGCTATGACCCGCACCCGGCGATTAAGGCTCCTGT 46221
|| || | | | ||| | | || |||||||| ||||| || ||
Sbjct 11368 TTCGAGGTCCTGGACTACCAGCACCATCCGGCGATCAAGGCGCCCGT 11322
>seq1636
Length=1555
Score = 123 bits (136), Expect = 8e-24
Identities = 428/662 (65%), Gaps = 12/662 (2%)
Strand=Plus/Plus
Query 45521 GTGTTCGGCCGTCAGCTGCGCTTTAACTTGCAGGACGGATTCCCGCTCGTGACGACGAAA 45580
|| ||||||| ||| |||| || | || || || |||||| | | || || ||
Sbjct 640 GTCTTCGGCCACCAGATGCGGTTCGATCTGGCCGAGGGCTTCCCGGTGCTCACCACCAAG 699
Query 45581 AAGTTGCATATCCGCTCGATCATTTATGAACTGCTCTGGTTTTTAAAAGGCGATACGAAT 45640
|| |||| | ||||||||||| || |||| ||||| | ||||| || ||
Sbjct 700 AAACTGCACCTGCGCTCGATCATCGTCGAGTTGCTGTGGTTCCTGCGCGGCGACACCAAC 759
Query 45641 GTTCGCTATTTGCAGGA--GAATGGTGTGACGATTTGGGACGAGTGGGCCGATGAAAACG 45698
|| |||| ||||||| | | ||| | || |||||||| ||||| ||||| |
Sbjct 760 GTGCGCTGGCTGCAGGATCGCAAGGTCAGC--ATCTGGGACGAATGGGCGGATGAGGCGG 817
Query 45699 GCGATCTCGGCCCAATCTACGGCGCGCAATGGCGGTCGTGGAAAGGGGCTGACGG---GA 45755
| ||||||||||| | || ||| ||||||||| ||| ||| ||||| |
Sbjct 818 GTGATCTCGGCCCGGTGTATGGCAAGCAATGGCGCGACTGGGTGACGGCGGACGGCCGGC 877
Query 45756 AAACGGTCGACCAAATTGCGGCGGTCTTTAAGGAAATCAAGCGCAACCCGAACTCGCGGC 45815
| | ||||||| || || | | | | || |||||| |||||| |||||| |
Sbjct 878 ACA---TCGACCAGATCAAGGGGCTGGTGCACGACATCAAGACCAACCCCGCCTCGCGCC 934
Query 45816 GGTTGCTTGTGAGCGCGTGGAACGTGGCAAAGTTGGGGGAAATGAAGTTGCCCCCATGTC 45875
| | | || | ||| |||||| | | | | ||| | || | || ||||
Sbjct 935 GCCAGATCGTCACCGCCTGGAACCCCGGCGATCTCCACGCCATGGCGCTGGCGCCGTGTC 994
Query 45876 ATTACGCCTTTCAGTTTTACGTCGCGAATGGCCGGTTGTCA-TGCATGTGGCAACAGCGT 45934
||| | || ||| || |||||||| |||||| |||| |||| | | |||||
Sbjct 995 ATTGCCTGTTCCAGACCTATGTCGCGAACGGCCGGCTGTCGCTGCAACTCT-ACCAGCGC 1053
Query 45935 TCTGTCGATACATTTCTAGGATTGCCGTTTAACATCGCTAGCTATGCGCTGTTGACACAT 45994
|| | ||| | || || || ||||||| |||||||| |||||||||||| | || ||
Sbjct 1054 TCGGCCGACATCTTCCTTGGCGTGCCGTTCAACATCGCCAGCTATGCGCTGCTCACCCAC 1113
Query 45995 ATGGTTGCCCAACAATGCGACCTCGATGTCGGCGAACTCATTTTCACCGGCGGCGACGTC 46054
||| | || || ||||||| || || ||||| |||| | ||||||||||| |
Sbjct 1114 ATGCTGGCGCAGCAATGCGGGCTGGAGCCGGGCGAGTTCATCTGGACCGGCGGCGATTGC 1173
Query 46055 CATTTGTACAAAAATCATCTGGAACAAGCGAAACTGCAGCTGACGCGCGAGCCGCGCCCG 46114
|| | || || || || || || ||| |||||| || ||| | |||
Sbjct 1174 CACCTTTATTCCAACCACCTCGATCAGGCGCGCGAGCAGCTTGGCCGTACCCCGGGACCG 1233
Query 46115 CTGCCGAAGCTCGTGATCAAACGGAAGCCGCCGTCTATCTTTGACTATGAATACGAGGAT 46174
|||||| ||| | ||||| || | ||| | | ||| || |||||| ||||||
Sbjct 1234 CTGCCGCGGCTAGAGATCACCCGCACGCCCGAGGCGATCGATGGCTATGAGCTAGAGGAT 1293
Query 46175 TT 46176
||
Sbjct 1294 TT 1295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 157745297168936
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |