Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq2071 178 4e-40 seq1636 123 8e-24 >seq2071 Length=31734 Score = 178 bits (196), Expect = 4e-40 Identities = 465/707 (66%), Gaps = 12/707 (2%) Strand=Plus/Minus Query 45521 GTGTTCGGCCGTCAGCTGCGCTTTAACTTGCAGGACGGATTCCCGCTCGTGACGACGAAA 45580 ||||||||| ||| |||| || || || | || || |||||||| ||||| || || Sbjct 12022 GTGTTCGGCTACCAGATGCGGTTCGACCTGAACGATGGCTTCCCGCTGGTGACCACCAAG 11963 Query 45581 AAGTTGCATATCCGCTCGATCATTTATGAACTGCTCTGGTTTTTAAAAGGCGATACGAAT 45640 ||| | || | || ||||| | || ||||| ||||| | | ||| | | Sbjct 11962 AAGGTCCACCTGAAATCCATCATCCACGAGCTGCTGTGGTTCCTGGAGGGCTCGAGCGAC 11903 Query 45641 GTTCGCTATTTGCAGGAGAATGGTGTGACGATTTGGGACGAGTGGGCCGATGAAAACGGC 45700 | | ||| ||| || ||||| || |||||||| ||||| || ||||| Sbjct 11902 AACAACAAGCTGCGCGAGCGCGGCGTGACCATCTGGGACGAATGGGCGCGCGAGGACGGC 11843 Query 45701 GATCTCGGCCCAATCTACGGCGCGCAATGGCGGTCGTGG---AAAGGGGCTGACGGGAAA 45757 || || || || | ||||||| ||| ||||| ||| | | | | |||| | Sbjct 11842 GACCTGGGGCCGGTGTACGGCGTGCAGTGGCGCAGCTGGCCGACACCCGACGGCGGGCAC 11783 Query 45758 ACGGTCGACCAAATTGCGGCGGTCTTTAAGGAAATCAAGCGCAACCCGAACTCGCGGCGG 45817 | ||||||| || || | | | ||| |||||| ||| ||| ||||||| || Sbjct 11782 A---TCGACCAGATCGCCGAAGCGGTGAAGACCATCAAGGCCAATCCGGACTCGCGCCGC 11726 Query 45818 TTGCTTGTGAGCGCGTGGAACGTGGCAAAGTTGGGGGAAATGAAGTTGCCCCCATGTCAT 45877 | | || ||||| ||||||||||| | | | | ||| | || | || || || Sbjct 11725 ATCATCGTCAGCGCCTGGAACGTGGCGGACATCCCGAAGATGGCGCTGGCGCCCTGCCA- 11667 Query 45878 TACGC---CTTTCAGTTTTACGTCGCGAATGGCCGGTTGTCATGCATGTGGCAACAGCGT 45934 ||| ||| ||||| ||||||||| | ||| | |||| ||| | | | ||||| Sbjct 11666 --CGCGTTCTTCCAGTTCTACGTCGCGGACGGCAAGCTGTCGTGCCAGCTGTACCAGCGC 11609 Query 45935 TCTGTCGATACATTTCTAGGATTGCCGTTTAACATCGCTAGCTATGCGCTGTTGACACAT 45994 || ||| | || || || ||||||| |||||||| ||||| ||||| | || || Sbjct 11608 AGTGCCGACATCTTCCTGGGCGTGCCGTTCAACATCGCCAGCTACGCGCTACTCACGCAC 11549 Query 45995 ATGGTTGCCCAACAATGCGACCTCGATGTCGGCGAACTCATTTTCACCGGCGGCGACGTC 46054 ||| | || || || |||||||| | |||||||| |||| | |||||||||||| | Sbjct 11548 ATGATCGCGCAGCAGTGCGACCTGGCGGTCGGCGACTTCATCTGGACCGGCGGCGACTGC 11489 Query 46055 CATTTGTACAAAAATCATCTGGAACAAGCGAAACTGCAGCTGACGCGCGAGCCGCGCCCG 46114 || | |||| || || | || || | | |||||||||| | ||| |||| | || Sbjct 11488 CACATCTACAGCAACCACCACGAGCAGGTGGAACTGCAGCTCTCCCGCCAGCCCCATCCC 11429 Query 46115 CTGCCGAAGCTCGTGATCAAACGGAAGCCGCCGTCTATCTTTGACTATGAATACGAGGAT 46174 || ||| | ||||| || |||||| |||| ||||| ||||| |||||||| Sbjct 11428 TACCCCGTGCTGGACATCAAGCGCAAGCCGGCGTCGATCTTCGACTACCGGTACGAGGAC 11369 Query 46175 TTTGAATTTGTCGGCTATGACCCGCACCCGGCGATTAAGGCTCCTGT 46221 || || | | | ||| | | || |||||||| ||||| || || Sbjct 11368 TTCGAGGTCCTGGACTACCAGCACCATCCGGCGATCAAGGCGCCCGT 11322 >seq1636 Length=1555 Score = 123 bits (136), Expect = 8e-24 Identities = 428/662 (65%), Gaps = 12/662 (2%) Strand=Plus/Plus Query 45521 GTGTTCGGCCGTCAGCTGCGCTTTAACTTGCAGGACGGATTCCCGCTCGTGACGACGAAA 45580 || ||||||| ||| |||| || | || || || |||||| | | || || || Sbjct 640 GTCTTCGGCCACCAGATGCGGTTCGATCTGGCCGAGGGCTTCCCGGTGCTCACCACCAAG 699 Query 45581 AAGTTGCATATCCGCTCGATCATTTATGAACTGCTCTGGTTTTTAAAAGGCGATACGAAT 45640 || |||| | ||||||||||| || |||| ||||| | ||||| || || Sbjct 700 AAACTGCACCTGCGCTCGATCATCGTCGAGTTGCTGTGGTTCCTGCGCGGCGACACCAAC 759 Query 45641 GTTCGCTATTTGCAGGA--GAATGGTGTGACGATTTGGGACGAGTGGGCCGATGAAAACG 45698 || |||| ||||||| | | ||| | || |||||||| ||||| ||||| | Sbjct 760 GTGCGCTGGCTGCAGGATCGCAAGGTCAGC--ATCTGGGACGAATGGGCGGATGAGGCGG 817 Query 45699 GCGATCTCGGCCCAATCTACGGCGCGCAATGGCGGTCGTGGAAAGGGGCTGACGG---GA 45755 | ||||||||||| | || ||| ||||||||| ||| ||| ||||| | Sbjct 818 GTGATCTCGGCCCGGTGTATGGCAAGCAATGGCGCGACTGGGTGACGGCGGACGGCCGGC 877 Query 45756 AAACGGTCGACCAAATTGCGGCGGTCTTTAAGGAAATCAAGCGCAACCCGAACTCGCGGC 45815 | | ||||||| || || | | | | || |||||| |||||| |||||| | Sbjct 878 ACA---TCGACCAGATCAAGGGGCTGGTGCACGACATCAAGACCAACCCCGCCTCGCGCC 934 Query 45816 GGTTGCTTGTGAGCGCGTGGAACGTGGCAAAGTTGGGGGAAATGAAGTTGCCCCCATGTC 45875 | | | || | ||| |||||| | | | | ||| | || | || |||| Sbjct 935 GCCAGATCGTCACCGCCTGGAACCCCGGCGATCTCCACGCCATGGCGCTGGCGCCGTGTC 994 Query 45876 ATTACGCCTTTCAGTTTTACGTCGCGAATGGCCGGTTGTCA-TGCATGTGGCAACAGCGT 45934 ||| | || ||| || |||||||| |||||| |||| |||| | | ||||| Sbjct 995 ATTGCCTGTTCCAGACCTATGTCGCGAACGGCCGGCTGTCGCTGCAACTCT-ACCAGCGC 1053 Query 45935 TCTGTCGATACATTTCTAGGATTGCCGTTTAACATCGCTAGCTATGCGCTGTTGACACAT 45994 || | ||| | || || || ||||||| |||||||| |||||||||||| | || || Sbjct 1054 TCGGCCGACATCTTCCTTGGCGTGCCGTTCAACATCGCCAGCTATGCGCTGCTCACCCAC 1113 Query 45995 ATGGTTGCCCAACAATGCGACCTCGATGTCGGCGAACTCATTTTCACCGGCGGCGACGTC 46054 ||| | || || ||||||| || || ||||| |||| | ||||||||||| | Sbjct 1114 ATGCTGGCGCAGCAATGCGGGCTGGAGCCGGGCGAGTTCATCTGGACCGGCGGCGATTGC 1173 Query 46055 CATTTGTACAAAAATCATCTGGAACAAGCGAAACTGCAGCTGACGCGCGAGCCGCGCCCG 46114 || | || || || || || || ||| |||||| || ||| | ||| Sbjct 1174 CACCTTTATTCCAACCACCTCGATCAGGCGCGCGAGCAGCTTGGCCGTACCCCGGGACCG 1233 Query 46115 CTGCCGAAGCTCGTGATCAAACGGAAGCCGCCGTCTATCTTTGACTATGAATACGAGGAT 46174 |||||| ||| | ||||| || | ||| | | ||| || |||||| |||||| Sbjct 1234 CTGCCGCGGCTAGAGATCACCCGCACGCCCGAGGCGATCGATGGCTATGAGCTAGAGGAT 1293 Query 46175 TT 46176 || Sbjct 1294 TT 1295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157745297168936