Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_019917.1 Length=62952 Score E Sequences producing significant alignments: (Bits) Value seq2231 190 8e-44 seq2323 89.7 2e-13 >seq2231 Length=7719 Score = 190 bits (210), Expect = 8e-44 Identities = 241/330 (73%), Gaps = 6/330 (2%) Strand=Plus/Plus Query 9695 CATGGCATCCGTCAACAAAGTCATCCTCGTCGGCAATCTCGGTGCCGACCCGGAAACCCG 9754 |||||||||||||||||| |||||| |||||||||| ||||| ||||| || | || Sbjct 7332 CATGGCATCCGTCAACAAGGTCATCATCGTCGGCAACCTCGGGAAGGACCCCGAGATGCG 7391 Query 9755 CTATCTCCCGAGCGGCGACGCAATCTCCAACATCCGCCTCGCGACGACCGATCGTTACAA 9814 | |||| ||||||| ||| |||| || | |||| || ||||| || | || Sbjct 7392 CACCTTCCCCAGCGGCGGGCGGGTCTGCAACGTCACCATCGCCACCACCGAGCGCTGGAA 7451 Query 9815 GGACAAAGCCAGCGGCGACTTCAAAGAAGTGACCGAGTGGCACCGCGTCGCCTTCTTCGG 9874 |||||| |||||||| | || || |||| |||||||||||||| | |||| | Sbjct 7452 GGACAAGCAGAGCGGCGAGATGAAGGAGCTGACGGAGTGGCACCGCGTGGTCTTCAATGA 7511 Query 9875 CCGCCTCGCCGAGATCGTCGACGAGCACCTGCGCAAGGGCGCATCGGTCTACATCGAGGG 9934 |||||| |||||||||| | |||| |||||||||||||| | ||||||| ||||||| Sbjct 7512 CCGCCTGGCCGAGATCGCGGGCGAGTACCTGCGCAAGGGCTCCCAGGTCTACGTCGAGGG 7571 Query 9935 GCGCATCAAAACGCGGAAGTGG---CAGGATCAATCCGGCCAGGATCGCTACACGACCGA 9991 || | ||||| |||||| | | ||| ||| ||| ||||| ||||| Sbjct 7572 CAGCCTGCGGACGCGCAAGTGGACCGACGCGCAA---GGCGTGGAGAAGTACACCACCGA 7628 Query 9992 GATCGTCGCCGACAAGATGCAGATGCTCGG 10021 |||| ||||||| ||||| |||||||||| Sbjct 7629 GATCCGCGCCGACGAGATGAAGATGCTCGG 7658 >seq2323 Length=2931 Score = 89.7 bits (98), Expect = 2e-13 Identities = 75/91 (82%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 7810 TGGAGGCGTGGCAGAGTGGTTTAATGTACTGGATTTGAAATCCAGCGACGGT--AACCCG 7867 |||| ||||||| |||||| |||| | || || |||||| || |||| || ||||| Sbjct 1377 TGGAAGCGTGGCCGAGTGGCTTAAGGCACGGGTCTTGAAAACCCGCGAAGGGGCAACCCT 1318 Query 7868 TCCGTGAGTTCGAATCTCACCGCCTCCGCCA 7898 ||||||||||||||||||||||| ||||||| Sbjct 1317 TCCGTGAGTTCGAATCTCACCGCTTCCGCCA 1287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 201314916374532