Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_019929.1
Length=243050
Score E
Sequences producing significant alignments: (Bits) Value
seq1636 156 7e-33
seq2071 127 3e-24
seq2557 98.7 2e-15
>seq1636
Length=1555
Score = 156 bits (172), Expect = 7e-33
Identities = 182/246 (74%), Gaps = 0/246 (0%)
Strand=Plus/Plus
Query 122420 GACCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCAA 122479
||||| || ||||||||||| || | |||||| || ||||| || || |||
Sbjct 613 GACCGCACCGGCACGGGCACGCTCAGCGTCTTCGGCCACCAGATGCGGTTCGATCTGGCC 672
Query 122480 AAAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTT 122539
| || |||||| || |||| ||||| || | ||||| ||||| |||||| ||| |
Sbjct 673 GAGGGCTTCCCGGTGCTCACCACCAAGAAACTGCACCTGCGCTCGATCATCGTCGAGTTG 732
Query 122540 CTGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATC 122599
||||||||||| ||||| |||||| | | | ||| | || ||| ||||| |||
Sbjct 733 CTGTGGTTCCTGCGCGGCGACACCAACGTGCGCTGGCTGCAGGATCGCAAGGTCAGCATC 792
Query 122600 TGGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCGT 122659
||||| |||||||| ||||| | ||| |||||||||||||||| || |||||||||||
Sbjct 793 TGGGACGAATGGGCGGATGAGGCGGGTGATCTCGGCCCGGTGTATGGCAAGCAATGGCGC 852
Query 122660 GAGTGG 122665
|| |||
Sbjct 853 GACTGG 858
>seq2071
Length=31734
Score = 127 bits (140), Expect = 3e-24
Identities = 220/320 (69%), Gaps = 0/320 (0%)
Strand=Plus/Minus
Query 123072 TGTCCTGTCAGCTGTATCAGCGCAGTGCTGACATGTTCCTAGGCGTACCGTTTAACATTG 123131
|||| || |||||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| |
Sbjct 11631 TGTCGTGCCAGCTGTACCAGCGCAGTGCCGACATCTTCCTGGGCGTGCCGTTCAACATCG 11572
Query 123132 CCTCTTACGCGCTCCTGATACACATGTTTGCCCAGCAGGCCAATATGGCAGTAGGTGACT 123191
|| |||||||| || | |||||| | || |||||| | | |||| || || ||||
Sbjct 11571 CCAGCTACGCGCTACTCACGCACATGATCGCGCAGCAGTGCGACCTGGCGGTCGGCGACT 11512
Query 123192 TCGTGTGGACGGGTGGGGATGTGCATCTGTACTCCAACCACCTGGAGCAGGCAGATTTGC 123251
|| | ||||| || || || || | ||| |||||||| ||||||| || |||
Sbjct 11511 TCATCTGGACCGGCGGCGACTGCCACATCTACAGCAACCACCACGAGCAGGTGGAACTGC 11452
Query 123252 AGTTAACTCGCGAACCTCATCCGTTACCACAACTGCGGATTAAACGTCGTCCGGATTCTA 123311
|| | | ||| | || ||||| | || ||| || || || |||| || |
Sbjct 11451 AGCTCTCCCGCCAGCCCCATCCCTACCCCGTGCTGGACATCAAGCGCAAGCCGGCGTCGA 11392
Query 123312 TCTTCGACTATAAGTTTGAAGATTTCGAAGTGGTCGGATACGAATCGCATGACGCTATTA 123371
|||||||||| || || || ||||| || | | ||| | ||| || || |
Sbjct 11391 TCTTCGACTACCGGTACGAGGACTTCGAGGTCCTGGACTACCAGCACCATCCGGCGATCA 11332
Query 123372 AGGCACCGGTGGCGATATGA 123391
|||| || |||||| | |||
Sbjct 11331 AGGCGCCCGTGGCGGTCTGA 11312
Score = 105 bits (116), Expect = 1e-17
Identities = 164/235 (70%), Gaps = 6/235 (3%)
Strand=Plus/Minus
Query 122424 GTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCAAAAAG 122483
|||| |||||| ||| | ||| ||||| || ||||| || |||||| | | |
Sbjct 12039 GTACCGGCACGCGCAGCGTGT------TCGGCTACCAGATGCGGTTCGACCTGAACGATG 11986
Query 122484 GTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTTCTGT 122543
| ||||||||||| || ||||| ||||| ||||| ||||||||||| ||||| ||||
Sbjct 11985 GCTTCCCGCTGGTGACCACCAAGAAGGTCCACCTGAAATCCATCATCCACGAGCTGCTGT 11926
Query 122544 GGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATCTGGG 122603
||||||| |||| | | ||| | | | ||| || | ||| | |||||||
Sbjct 11925 GGTTCCTGGAGGGCTCGAGCGACAACAACAAGCTGCGCGAGCGCGGCGTGACCATCTGGG 11866
Query 122604 ATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCG 122658
| |||||||| || || || | || || ||||||||||| ||| |||||
Sbjct 11865 ACGAATGGGCGCGCGAGGACGGCGACCTGGGGCCGGTGTACGGCGTGCAGTGGCG 11811
>seq2557
Length=8265
Score = 98.7 bits (108), Expect = 2e-15
Identities = 67/74 (91%), Gaps = 1/74 (1%)
Strand=Plus/Minus
Query 169732 TGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGCCCC 169791
||||||||||||||| ||||| |||| ||||||||| |||||||||||||||||||||||
Sbjct 489 TGTAGCTCAGTTGGT-TAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGCCCC 431
Query 169792 GTCAGTCCTGCCAT 169805
|||| || |||||
Sbjct 430 GTCACTCGCGCCAT 417
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 777605521630400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |