Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq1636 156 7e-33 seq2071 127 3e-24 seq2557 98.7 2e-15 >seq1636 Length=1555 Score = 156 bits (172), Expect = 7e-33 Identities = 182/246 (74%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 122420 GACCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCAA 122479 ||||| || ||||||||||| || | |||||| || ||||| || || ||| Sbjct 613 GACCGCACCGGCACGGGCACGCTCAGCGTCTTCGGCCACCAGATGCGGTTCGATCTGGCC 672 Query 122480 AAAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTT 122539 | || |||||| || |||| ||||| || | ||||| ||||| |||||| ||| | Sbjct 673 GAGGGCTTCCCGGTGCTCACCACCAAGAAACTGCACCTGCGCTCGATCATCGTCGAGTTG 732 Query 122540 CTGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATC 122599 ||||||||||| ||||| |||||| | | | ||| | || ||| ||||| ||| Sbjct 733 CTGTGGTTCCTGCGCGGCGACACCAACGTGCGCTGGCTGCAGGATCGCAAGGTCAGCATC 792 Query 122600 TGGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCGT 122659 ||||| |||||||| ||||| | ||| |||||||||||||||| || ||||||||||| Sbjct 793 TGGGACGAATGGGCGGATGAGGCGGGTGATCTCGGCCCGGTGTATGGCAAGCAATGGCGC 852 Query 122660 GAGTGG 122665 || ||| Sbjct 853 GACTGG 858 >seq2071 Length=31734 Score = 127 bits (140), Expect = 3e-24 Identities = 220/320 (69%), Gaps = 0/320 (0%) Strand=Plus/Minus Query 123072 TGTCCTGTCAGCTGTATCAGCGCAGTGCTGACATGTTCCTAGGCGTACCGTTTAACATTG 123131 |||| || |||||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| | Sbjct 11631 TGTCGTGCCAGCTGTACCAGCGCAGTGCCGACATCTTCCTGGGCGTGCCGTTCAACATCG 11572 Query 123132 CCTCTTACGCGCTCCTGATACACATGTTTGCCCAGCAGGCCAATATGGCAGTAGGTGACT 123191 || |||||||| || | |||||| | || |||||| | | |||| || || |||| Sbjct 11571 CCAGCTACGCGCTACTCACGCACATGATCGCGCAGCAGTGCGACCTGGCGGTCGGCGACT 11512 Query 123192 TCGTGTGGACGGGTGGGGATGTGCATCTGTACTCCAACCACCTGGAGCAGGCAGATTTGC 123251 || | ||||| || || || || | ||| |||||||| ||||||| || ||| Sbjct 11511 TCATCTGGACCGGCGGCGACTGCCACATCTACAGCAACCACCACGAGCAGGTGGAACTGC 11452 Query 123252 AGTTAACTCGCGAACCTCATCCGTTACCACAACTGCGGATTAAACGTCGTCCGGATTCTA 123311 || | | ||| | || ||||| | || ||| || || || |||| || | Sbjct 11451 AGCTCTCCCGCCAGCCCCATCCCTACCCCGTGCTGGACATCAAGCGCAAGCCGGCGTCGA 11392 Query 123312 TCTTCGACTATAAGTTTGAAGATTTCGAAGTGGTCGGATACGAATCGCATGACGCTATTA 123371 |||||||||| || || || ||||| || | | ||| | ||| || || | Sbjct 11391 TCTTCGACTACCGGTACGAGGACTTCGAGGTCCTGGACTACCAGCACCATCCGGCGATCA 11332 Query 123372 AGGCACCGGTGGCGATATGA 123391 |||| || |||||| | ||| Sbjct 11331 AGGCGCCCGTGGCGGTCTGA 11312 Score = 105 bits (116), Expect = 1e-17 Identities = 164/235 (70%), Gaps = 6/235 (3%) Strand=Plus/Minus Query 122424 GTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCAAAAAG 122483 |||| |||||| ||| | ||| ||||| || ||||| || |||||| | | | Sbjct 12039 GTACCGGCACGCGCAGCGTGT------TCGGCTACCAGATGCGGTTCGACCTGAACGATG 11986 Query 122484 GTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTTCTGT 122543 | ||||||||||| || ||||| ||||| ||||| ||||||||||| ||||| |||| Sbjct 11985 GCTTCCCGCTGGTGACCACCAAGAAGGTCCACCTGAAATCCATCATCCACGAGCTGCTGT 11926 Query 122544 GGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATCTGGG 122603 ||||||| |||| | | ||| | | | ||| || | ||| | ||||||| Sbjct 11925 GGTTCCTGGAGGGCTCGAGCGACAACAACAAGCTGCGCGAGCGCGGCGTGACCATCTGGG 11866 Query 122604 ATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCG 122658 | |||||||| || || || | || || ||||||||||| ||| ||||| Sbjct 11865 ACGAATGGGCGCGCGAGGACGGCGACCTGGGGCCGGTGTACGGCGTGCAGTGGCG 11811 >seq2557 Length=8265 Score = 98.7 bits (108), Expect = 2e-15 Identities = 67/74 (91%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 169732 TGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGCCCC 169791 ||||||||||||||| ||||| |||| ||||||||| ||||||||||||||||||||||| Sbjct 489 TGTAGCTCAGTTGGT-TAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGCCCC 431 Query 169792 GTCAGTCCTGCCAT 169805 |||| || ||||| Sbjct 430 GTCACTCGCGCCAT 417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 777605521630400