Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq2004 123 2e-22 seq934 95.1 8e-14 seq1640 91.5 1e-12 >seq2004 Length=401351 Score = 123 bits (136), Expect = 2e-22 Identities = 450/694 (65%), Gaps = 13/694 (2%) Strand=Plus/Minus Query 475487 CGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACT 475546 ||||| | || ||||| || ||||| ||||| | || || |||||| | || || || Sbjct 15845 CGTCTCCGCACCGCTTGCGAGCGTGCCAAGCGCACCCTCTCCTCTGCTGCCCAGACCTCT 15786 Query 475547 GTTGAAGTTGATTCTCTTTTTGAAGGAATTGA-TTATAATACTCTTATTACAAGGGCTAA 475605 |||| | || ||||| || || || ||||| || || ||| || || | ||| Sbjct 15785 ATTGAGATCGACTCTCTCTTCGAGGGTATTGACTTCTACACCTCC-ATCACCCGTGCTCG 15727 Query 475606 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCT 475665 || ||||| | || ||||| || | || || || ||||| || | || || Sbjct 15726 TTTCGAAGAACTCTGCCAGGATCTTTTCCGTTCCACCATGGAGCCCGTCGAGCGTGTCCT 15667 Query 475666 CAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAAC 475725 | | ||| | || | |||||||| ||||||||||| || | || || ||||| || Sbjct 15666 CCGCGATGCCAAGATCGACAAATCCTCCGTCCATGAAATCGTCTTGGTCGGTGGTTCTAC 15607 Query 475726 AAGAATTCCAAAAAT-AAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATG 475784 | ||||| || || ||| | ||| |||| | ||| || || || || || Sbjct 15606 CCGTATTCCCAAGATCCAGA-AGATGGTTTCCGACTTTTTCAACGGCAAGGAGCCCAA-- 15550 Query 475785 AAAGTGTA--AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTT 475842 |||| || || |||||||| |||||||| || || ||||| ||||| || ||||| || Sbjct 15549 CAAGTCTATCAACCCTGATGAGGCTGTTGCCTACGGTGCTGCCGTCCAGGCTGCTATCTT 15490 Query 475843 ATCAGGTCA---ATCAGACGAG-AAACTAAATAATATTGTACTTGTTGACGTAACTCCAC 475898 || ||| | || | || ||| || | || | ||| | ||||| | || | Sbjct 15489 GTCCGGTGACACCTCTTCCAAGTCTACT-AACGAGATCCTCCTTCTCGACGTTGCCCCTC 15431 Query 475899 TTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTC 475958 | || || ||| | || || | ||| || | |||||| ||| || | | || ||| Sbjct 15430 TCTCCTTGGGTATCGAGACTGCTGGTGGTGTCATGACTCCTCTCATCAAACGTAACACTA 15371 Query 475959 CTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAA 476018 | |||||| ||| || || | || || || | || || || || | ||| Sbjct 15370 CCATCCCAACCAAGAAGTCCGAGACCTTCTCTACCTTCTCCGACAACCAGCCCGGTGTTT 15311 Query 476019 CCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTT 476078 || || ||| ||| |||||| | ||| || || || || || || | | Sbjct 15310 TGATTCAGGTCTATGAGGGTGAACGTGCTCGCACCAAGGACAACAATCTGCTCGGCAAGT 15251 Query 476079 TTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTG 476138 | | ||| || ||||||||||| || | || ||||||||||| || ||||| || | Sbjct 15250 TCGAACTTACCGGCATTCCTCCTGCCCCACGTGGTGTTCCTCAAATCGAGGTTACCTTCG 15191 Query 476139 ATATTGATGCAAATGGTATTCTTAATGTTACTGC 476172 || | ||||| || ||||| | |||||| |||| Sbjct 15190 ATGTCGATGCCAACGGTATCATGAATGTTTCTGC 15157 >seq934 Length=187681 Score = 95.1 bits (104), Expect = 8e-14 Identities = 115/154 (75%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||||||||| ||||| || || ||||| |||||||| || || || |||||||| ||||| Sbjct 9969 ATCTTCAAGCTGCTTGCCGGCGAAAATTAGACGTTGCTGGTCTGGTGGAATTCCCTCCTT 9910 Query 480677 GTCTTGAATCTTTTGTTTGACAGCT-TCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAA 480735 |||||| || |||||||| | | | || || || || | | | |||||| || | Sbjct 9909 GTCTTGGAT-TTTTGTTTTAACGTTATCGATCGTGTCTGAAGATTCAACTTCAAGTGTGA 9851 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || ||||| | ||||| |||||||| || Sbjct 9850 TTGTCTTTCCGGTCAAGGTCTTGACGAAAATCTG 9817 Score = 93.3 bits (102), Expect = 3e-13 Identities = 126/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || || |||| ||||| | | ||||||||| || || ||||| || || | ||||| Sbjct 9468 TTGTAGTCAGAGAGAGTGCGGCCATCTTCAAGCTGTTTACCAGCGAAGATCAAGCGTTGC 9409 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || |||||||| || || |||||||| || ||||| || ||| || || |||||| Sbjct 9408 TGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTAACATTGTCGATCGTATCA 9349 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || | || || || || ||||| || ||||||||||| |||||||| || Sbjct 9348 CTGGACTCAACCTCGAGAGTGATGGTTTTGCCCGTGAGAGTCTTCACGAAAATCTG 9293 Score = 93.3 bits (102), Expect = 3e-13 Identities = 153/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 || ||||| || ||||| || || || ||| || || |||||||||| ||||| Sbjct 9806 CGGAGACGAAGGACAAGGTGGAGGGTGGATTCCTTCTGAATGTTATAATCAGAGAGAGTC 9747 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | | || || || |||||||| || || || | ||| || ||||| ||||| || ||| Sbjct 9746 CGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCCGGAGGGATGCCT 9687 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAG 480730 ||||||||||| ||||| ||| || || || ||||| | | | | |||||| Sbjct 9686 TCCTTGTCTTGGATCTTGGTTTTCACGTTATCGATGGTATCCGAAGACTCCA-CTTCAAG 9628 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTT 480768 || || || || ||||| |||||||| || | |||| Sbjct 9627 AGTGATGGTCTTTCCGGTAAGAGTCTTGACAACTATTT 9590 Score = 87.8 bits (96), Expect = 1e-11 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 480576 GTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCA 480635 |||||||| || | ||||| || | || || | | ||||||||||||||| ||| Sbjct 10238 GTACTTTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCATCTTCAAGTTGCTTACCA 10179 Query 480636 GCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGT-TT 480694 |||||||| ||||||||||| || || || || || ||||| ||||| || |||||| || Sbjct 10178 GCAAAAATGAGACGTTGTTGGTCTGGTGGGATACCCTCCTTATCTTGGAT-TTTTGTCTT 10120 Query 480695 GACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGT 480754 || || || || || | | | || | |||||||| || ||||| | || Sbjct 10119 CACGTTGTCGATTGTGTCTGAGGATTCGACCTCTAACGTAATAGTCTTGCCGGTCAATGT 10060 Query 480755 CTTAACGAAAATTTG 480769 ||| || || ||||| Sbjct 10059 CTTCACAAATATTTG 10045 >seq1640 Length=153026 Score = 91.5 bits (100), Expect = 1e-12 Identities = 119/161 (74%), Gaps = 4/161 (2%) Strand=Plus/Plus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 || || || |||||||| |||||||| | ||| || || |||||||| || ||||||||| Sbjct 9717 TCCTCGAGCTGCTTTCCGGCAAAAATCAAACGCTGCTGGTCAGGAGGGATGCCTTCCTTG 9776 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGT-GTGTGAAGTTTCAAGGGTAAT 480736 || |||||||| |||||| || || || || | | | | || ||||| || Sbjct 9777 TCCTGAATCTTGCTCTTGACATTGTCGATTGTGTCGCTCGACTCCA-CCTCGAGGGTGAT 9835 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAA--AATTTGGAACGA 480775 ||| || |||||||| ||||| ||||| ||| ||||||| Sbjct 9836 AGTCTTGCCGGTGAGGGTCTTGACGAAGCTATTCGGAACGA 9876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268062354423152