Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2528 178 2e-39 seq2704 111 2e-19 >seq2528 Length=594046 Score = 178 bits (196), Expect = 2e-39 Identities = 698/1082 (65%), Gaps = 32/1082 (3%) Strand=Plus/Plus Query 75876 TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGG 75935 ||||| | || || || || | ||||||||||| || | || | ||||||||||||| Sbjct 61567 TTTGGTATGCCATCCTAGAAGCTCAGACGGAGACGGGTAACCCGTTCATGCTTTACAAGG 61626 Query 75936 ATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTT 75995 |||| || ||| ||||| ||||| || || | ||||| || ||||| || || | Sbjct 61627 ATGCGTGCAACCGCAAGAGCAACCAGAAAAACCTTGGAACTATTCGAAGCTCGAACCTCT 61686 Query 75996 GCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAA 76055 |||||||||| | |||||||| | ||||| || |||||||| ||||||| Sbjct 61687 GCACGGAAATCATCGAGTACACCGCCCCAGATGAAGTTGCAGTTTGCAACCTGGCATCGC 61746 Query 76056 TCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATG 76115 | ||| | || | || || || | | || | ||| | || ||| | |||| Sbjct 61747 TTGCCTTGCCCACATACGTTGATCCTGTTCGTGGCGAGTATGACTTTGGCAAATTGCATG 61806 Query 76116 AAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCG 76175 || | || | || || | ||||| ||| | | ||||| | || ||||| | Sbjct 61807 AAGTTACTCAAGTTCTTGTCCGCAATCTGAACAAAATTATTGATAACAACCACTATCCTG 61866 Query 76176 T---TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAG 76232 | ||| || || ||| |||| | || || | ||||| | | || || |||| Sbjct 61867 TCCCTGAA---GCCCGCAAGAGTAATTTCCGTCATCGGCCTATCGCGGTTGGCGTCCAAG 61923 Query 76233 GTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGA 76292 |||| || |||| || || | ||| | |||||||||| || || ||| || Sbjct 61924 GTCTTGCCGATGCTTTCCTTGCGCTCCGATTGCCATTTGATTCGCCCGAGGCTAAGCAGT 61983 Query 76293 TGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGG 76352 ||||| || ||||||||||| || ||||| || | || ||| ||| || | | Sbjct 61984 TGAATATTCAGATCTTTGAAACAATTTATCATGCGGCTTTGACCGCGTCTTGCGATATCG 62043 Query 76353 CTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTT- 76411 | ||| | || |||||||||| | || || ||||| | || || |||| ||| Sbjct 62044 CCAAAGTTGACGGGCCCTATGAGACCTACGAAGGCTCTCCTGTATCTCA--GGGTACTTT 62101 Query 76412 -CAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAAC--TACGACTGGGATGTTCTCAAG 76468 |||| |||||||| |||| |||| |||| || | | | || ||||| | || || Sbjct 62102 GCAGTATGATATGT-GGAACGTGACGCCAA-CTGACCTTTGGGATTGGGACGCGCTGAAA 62159 Query 76469 GAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCC 76528 | |||| | | ||| | || |||||||| | | ||||| |||||||| || Sbjct 62160 AAGGACATCGCCAAACATGGTGTACGCAACAGTCTGCTCGTTGCACCTATGCCAACTGCT 62219 Query 76529 TCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTAC 76588 |||| || ||| | || || ||||| ||||| ||||||||| |||||||||| Sbjct 62220 AGCACCAGTCAGATCCTCGGATTCAACGAATGTTTTGAGCCATACACATCAAACATCTAT 62279 Query 76589 CTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAATGACCTC 76648 || | || ||||| ||||| | || ||| || | || || ||| Sbjct 62280 TCTCGACGGGTTCTTGCAGGCGAGTTCCAAGTCGTTAACCCATGGCTTCTGAAAGATCTC 62339 Query 76649 AAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGA---TCTCA-TGGTGAAAGCGGGTGG 76704 | | ||||| ||||| | |||||||| | | ||| || |||| || || Sbjct 62340 GTCGATCTCGGTCTGTGGTCGGACAATATGAAGAACCGTATCATTGCTGAA----GGCGG 62395 Query 76705 TTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTACCGCACAGTGTG 76764 ||| || || || ||| | ||||||| | ||||| || ||||| || ||||| Sbjct 62396 TTCGATCCAGAACATCCCCAATATCCCTGCGGATATTAAAGCACTCTATAAGACGGTGTG 62455 Query 76765 GGAAATC---AAGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGA 76821 ||||||| ||| ||| | | || | ||||| || ||||||||| ||||| || Sbjct 62456 GGAAATCTCTCAGA-GAACCA--TTGTTCAGATGGCTGCCGATCGTGGTGCATTCATCGA 62512 Query 76822 TCAAAGTCAAAGTATGAATCTATTCA-TGGAAAG-TCCAACGATGTCCAAGCTCTCTTCT 76879 || ||| | |||| ||| || | ||| | || || ||| ||| || | Sbjct 62513 CCAGTCCCAATCTCTGAA--TATCCACTTGAAGGAGCCCACCATGGGCAAAATCACCAGC 62570 Query 76880 ATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCGATCAAAG 76939 ||||| | || ||||| | ||| || |||||||| |||||||| |||||| | | | Sbjct 62571 ATGCACTTTGCCGGATGGAAGCTGGGCCTGAAAACCGGGATGTACTACCTCCGAACCATG 62630 Query 76940 GC 76941 || Sbjct 62631 GC 62632 >seq2704 Length=633058 Score = 111 bits (122), Expect = 2e-19 Identities = 120/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 65071 TTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTC 65130 || ||| |||||||| |||| ||||| || ||||||||||| ||| || || || Sbjct 56601 TTTGCCCAGCGCCTTGTTGCCTTTGCAGCCGTTGAGGGTATCTTTTTCAGTGGCTCTTTT 56542 Query 65131 TGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAA 65190 | |||| | ||| |||||||||| || || ||||| ||||| |||||| |||||| Sbjct 56541 GCCTCTATCTTCTGGCTGAAGAAGCGTGGCCTTATGCCTGGCCTCACCTTCTCCAATGAA 56482 Query 65191 CTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCC 65229 || |||||||| || ||||| |||||| || |||||| Sbjct 56481 CTGATTTCCCGCGACGAGGGCCTCCACACTGACTTTGCC 56443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596549286805120