Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq934 114 2e-20 >seq934 Length=187681 Score = 114 bits (126), Expect = 2e-20 Identities = 134/181 (74%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 155824 TGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTG 155883 ||||||||||| | || |||||||| || || |||||||| ||||| |||||| || | Sbjct 10043 TGCAAATATTTGTGAAGACATTGACCGGCAAGACTATTACGTTAGAGGTCGAATCCTCAG 10102 Query 155884 ATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAAC 155943 | | || |||||||| | ||||| |||||||| || || || || ||||| |||| Sbjct 10103 ACACAATCGACAACGTGAAGACAAAAATCCAAGATAAGGAGGGTATCCCACCAGACCAAC 10162 Query 155944 AAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATA 156003 || | | |||| ||| |||||||| || |||||| | | || | || || ||||| | Sbjct 10163 AACGTCTCATTTTTGCTGGTAAGCAACTTGAAGATGGCCGCACGCTTTCCGACTATAACA 10222 Query 156004 T 156004 | Sbjct 10223 T 10223 Score = 87.8 bits (96), Expect = 3e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 155824 TGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTG 155883 || ||||| || | || || | || ||||| || || || | ||||| || ||| | Sbjct 9587 TGAAAATAGTTGTCAAGACTCTTACCGGAAAGACCATCACTCTTGAAGTGGAGTCTTCGG 9646 Query 155884 ATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAAC 155943 ||| || |||||||||| || || ||||| || |||||||| ||||| || || | Sbjct 9647 ATACCATCGATAACGTGAAAACCAAGATCCAAGACAAGGAAGGCATCCCTCCGGATCAGC 9706 Query 155944 AAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATA 156003 | | ||||| | ||||| ||||||||||| || | | ||| | || |||||||| | Sbjct 9707 AGCGTTTGATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGGACTCTCTCTGATTATAACA 9766 Query 156004 T 156004 | Sbjct 9767 T 9767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731847079758400