Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_021298.1
Length=51252
Score E
Sequences producing significant alignments: (Bits) Value
seq741 181 3e-41
>seq741
Length=35645
Score = 181 bits (200), Expect = 3e-41
Identities = 240/331 (73%), Gaps = 4/331 (1%)
Strand=Plus/Minus
Query 40419 CCGTACGTCGCGATCTGCGCGACCTTGTCGGCCCCGTACTTCCGGGTGACGTACTGGATC 40478
||| | ||||||||||| ||| ||| |||||||| | ||||||| |||
Sbjct 10688 CCGAAGGTCGCGATCTGGCTGACGGCCTCGCGGCCGTACTTGTCCTTCACGTACTCGATG 10629
Query 40479 ACCTCGCCACGAC--GCCGGTCATCGAAGTCGATGTCGACATCGGGCATGGACACGCGCT 40536
||| | | || ||| | || |||||||||||||| || ||||| ||||||||||
Sbjct 10628 ACCCGGTCCCGGTTGGCCTGGCA--GAAGTCGATGTCGAAGTCCGGCATCGACACGCGCT 10571
Query 40537 CGGGGTTCAGGAACCGCTCGAAGATGAGTCCGTGCTCCAGCGGGTCGAGGTCGGTGATCC 40596
| ||||||||||| |||||||| | || || || || || |||||||||||||||
Sbjct 10570 CCGGGTTCAGGAAGCGCTCGAACAGCAGGTTGTACTGGAGGGGATCGAGGTCGGTGATCT 10511
Query 40597 CGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAGCCTCGCCCAGGGCCGACCCAGACGC 40656
||| ||||| |||||||| ||||| | || || || || ||||||||| | ||
Sbjct 10510 TGAGCGAATAGGCCACCAGCGATCCGGCGCCTGATCCACGGCCCGGGCCGACCGGGCAGC 10451
Query 40657 CGTTCTCCTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAAGTACGACGGGAAGCCCA 40716
|||| | ||| |||||| ||||||||| | |||| ||||||||| ||||| ||||
Sbjct 10450 CGTTGTTCTTGGCCCAGTTGATGAAGTCGCCCACGATGAGGAAGTAACCGGGGAATCCCA 10391
Query 40717 TCTGGATGATCATGTCGATCTCGTACTGGAG 40747
||| | ||| | |||||||| ||| |||
Sbjct 10390 TCTTCAGGATGGTCCCGATCTCGAACTCGAG 10360
Score = 129 bits (142), Expect = 2e-25
Identities = 213/304 (70%), Gaps = 14/304 (5%)
Strand=Plus/Minus
Query 39361 ACTCGGCTGGGTAGTGCGTCTTCAGCCACGCCGTGCGGTACGCGATGAGTCCGTACGCCG 39420
||||||| | ||||||| ||||||||| | ||| ||||||||| || |||||| |
Sbjct 11710 ACTCGGCCGTGTAGTGCACCTTCAGCCAGCCGGTGTGGTACGCGAGCAGCGAGTACGCGG 11651
Query 39421 CCGAGTGCGCCTTGTTGAAGGCGTAGCCAGCGAACGGGACCAGCACGTCCCACA------ 39474
| | ||||| |||||||||| ||||||| ||||| ||| || ||| | |
Sbjct 11650 CGGCGTGCGACTTGTTGAAGCCGTAGCCCGCGAATTTCTCCATCAGGTCGAAGATCTCGT 11591
Query 39475 CTGCCTGGATG-GCACCGTCCGAGTAGCCTCGCTCGCGCGCTCCCTTCTGGAAGTTCACG 39533
| |||| || | ||| | | | |||| ||||| | ||| |||| || |
Sbjct 11590 CCGCCTTCTCCTGCGCGATCCCATT--CTTCGC-CGCGCCCGCCC----GGAAAATCTCC 11538
Query 39534 AACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATCGCCCGGCGAAGCAGGTCGGCC 39593
| || ||||| |||||| |||||||||||||||||||||||| |||||||| ||
Sbjct 11537 CGGTGCTGGGCCATCTCCTCGGCCTTCTTCTTGCCCATCGCCCGGCGCAGCAGGTCCGCG 11478
Query 39594 TGACCGAGGGTGTACCCGGCCATGACCTGCGCAACCTTCTGCACCTGCTCCTGGTAGATG 39653
|| || ||||| ||| ||| || |||||| || | |||||| ||||||||||
Sbjct 11477 CCGCCCAGCGTGTAGCCGCCCAGGATCTGCGCGGTCTGCATCACCTGTTCCTGGTAGACC 11418
Query 39654 ATGA 39657
||||
Sbjct 11417 ATGA 11414
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 163879498736432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |