Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_021301.1
Length=56279
Score E
Sequences producing significant alignments: (Bits) Value
seq559 379 7e-101
>seq559
Length=35318
Score = 379 bits (420), Expect = 7e-101
Identities = 603/851 (71%), Gaps = 28/851 (3%)
Strand=Plus/Plus
Query 42975 CAAGTTCAACGACCTCATCCAGAGCG-TGCACCGGATTCAACGGTTCGGCCAAACCCACC 43033
||||||||||||| |||||||| ||| | |||||| | || || ||| || | ||||
Sbjct 24654 CAAGTTCAACGACTTCATCCAG-GCGATCCACCGGCTCCAGCGCTTCCAGCAGTCGCACC 24712
Query 43034 CTTGCACCGCCCATCTCATCCACTCCGAAACCGAACGGGAAGTGGTGCGGGTCATCCGCG 43093
| | | | | |||||||| ||||||| || ||||| || ||||| | | | | |
Sbjct 24713 CGGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGTGCGCGACCTGCAGG 24772
Query 43094 AGAAATGGGCACAACACCGAGAGTTGACATCAACGATGACCGACATCATTCACGAGTACG 43153
||| ||||| | ||| ||| ||| | ||| |||| ||||| | ||| || |
Sbjct 24773 CGAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGATCATCCGCGAATATG 24832
Query 43154 GGCTTGACCCCGAGG-CAATTTCGGAAGCGCTGCAACGCTCCATCGGGTGCGAACGCATC 43212
| || | | || | | |||| ||||| | ||||| ||||| ||| ||
Sbjct 24833 GCCTGCAGCATGACGTCGCCCTCGGC-GCGCTCAAGCGCTCGATCGGCGTCGAGCGGCAG 24891
Query 43213 GAAGCCTCTGGTGAGGGCTGGTTGTTCGCCAACAACGACTGCGTGCCCGAAACCGAGTCC 43272
|| | | |||| || |||||| | | || ||||||||||||| || | |
Sbjct 24892 GAGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCGATGAGGCTGCCCGG 24951
Query 43273 ATGGGCGACAGCTCGGTGGACCTGATTGTCACCAGCATTCCGTTCTCCAACCACTACGAG 43332
||| ||| | ||||| |||||||| |||||| ||| |||||| |||||||||||||
Sbjct 24952 CTGGACGAAGGATCGGTCGACCTGATCGTCACCTCCATCCCGTTCAGCAACCACTACGAG 25011
Query 43333 TACACGCCGAGCTACAACGACTTCGGCCACACCGACGACAACGCGCATTTCTGGGCGCAG 43392
|||||||||||||||||||||||||||||||| ||||| ||| |||||||| ||||||
Sbjct 25012 TACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGCATTTCTTCGCGCAG 25071
Query 43393 ATGGACTACCTCACACCGCAGCTGCTGCGCATCCTCGCGCCGGGCCGTATCTACGCCTG- 43451
||||| | || || ||| | ||||| || || ||||||||||| | ||||||
Sbjct 25072 ATGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCGCCGGGCCGGCT---CGCCTGC 25128
Query 43452 --CCACGTCAAGGACCGCATCTTGTTCGGAAACGTCACCGGCGCCGGCGTGCCCACAGTG 43509
|||||| |||||||| ||| ||||||| || ||||||| || ||||| || ||
Sbjct 25129 ATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGGGTGTGCCGACCGTC 25188
Query 43510 TCCCCGTTCCACGCCGAGGCGATCTTCCAC---GGCCGCAAACACGGCTTCGACTACCTC 43566
|||||||||||| || ||| ||| ||| ||||||||| | | | |
Sbjct 25189 AATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC---CACGGCTTCCAGTTCATG 25245
Query 43567 GGCATGATCACCGTGGTCACCGATGTGGTGCGGGAAAACAACCAGACGTACCGGCTGGGC 43626
|||||||||||||| |||||||| || ||||| || ||||||||||| ||||| |||
Sbjct 25246 GGCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCCTG--- 25302
Query 43627 TGGT-CGGAGCAGTGC--AAAGACGCCACCAAGATGGGTGTCGGCTCCCCGGAATACGTT 43683
| || | | | ||| || |||| ||| |||||||| |||| ||| ||||||||
Sbjct 25303 TCGTACAGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCAGCCCCGAATACGTG 25362
Query 43684 CTGCTGTTCCACAAACCGCAAACAGACAGGTCGAAGGGATACGCCGACACACCCGTCACC 43743
|||||| | | ||| ||||||| ||| | || || || |||||||| || ||||||
Sbjct 25363 CTGCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCCGACACGCCGGTCACC 25422
Query 43744 AAATCCAAGGACGA---ATACACCCGTGCCCGTTGGCAGGTGGACGCGCACGCGTTCTGG 43800
|| || | ||| |||| || || || |||||||| ||||| ||||| ||||||
Sbjct 25423 AA--GGAACG-CGAGAGCTACAGCCTGGCGCGGTGGCAGGTCGACGCCCACGCCTTCTGG 25479
Query 43801 CGATCGAGCGG 43811
|| || |||||
Sbjct 25480 CGCTCCAGCGG 25490
Score = 268 bits (296), Expect = 3e-67
Identities = 318/428 (74%), Gaps = 6/428 (1%)
Strand=Plus/Plus
Query 42145 ATCTATCTCACCAACTATGAGAGTGTCCGCGACGGCAAGCTGGACCCGACACTGTTCACG 42204
|||| || ||||| || ||||| ||||||||||||||| | ||| ||| |||||
Sbjct 22784 ATCTTCCTGACCAATTACGAGAGCGTCCGCGACGGCAAGGTCGACGTCACAACCTTCACC 22843
Query 42205 GCCGTCTCACTCGATGAGGCATCCGTGCTGCGCTCGTTCGGGTCGAAGACCTACCAGTCG 42264
|||||| || || ||||| | | || |||||||||||||| ||||||| |||| ||
Sbjct 22844 GCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGGGTCAAAGACCTTCCAGACG 22903
Query 42265 TTCCTGGAGCTGTTCGACGGCGTGCCCTATCGGTTTGTCGCCACCGCGACGCCGTCTCCG 42324
|||||| ||| ||||| | ||||| || || |||||||| ||||| || || || ||
Sbjct 22904 TTCCTGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCCTCGCCC 22963
Query 42325 AATCGCTTCAAGGAGCTGATCCACTACGCGGGCTATCTCGGTGTGATGGACACCGGCGCA 42384
|| |||| ||||||||||||||| ||||| || | ||||| ||||||||||||||| |
Sbjct 22964 AACCGCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACCGGCCAA 23023
Query 42385 GCGTTGACGCGTTGGTTCCAGCGGGACTCCACGAAGGCGAACAACCTCACCCTCTATCCC 42444
||| | || || | |||||||| || | ||||||| | | ||||||||||| ||
Sbjct 23024 GCGCTCACCCGCTTCTTCCAGCGCAACAGCGAGAAGGCGGGCGATCTCACCCTCTACCCG 23083
Query 42445 CACAAGGAGCGTGAGTTCTTTCTGTGGCTCAACACCTGGGCCGCGTTCGTGCAATCGCCG 42504
|||||||| | ||||||| |||||||| || | |||||||| ||| |||| |||
Sbjct 23084 CACAAGGAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGGCCGTTTTCCTGCAGCGCCCG 23143
Query 42505 GCAGACCTCGG--TCA-CGACGCCACCGGATACGACCTGCCGCCCCTGGAGGTGGTCTGG 42561
|||||||| ||| |||| ||| ||||| ||||| | || ||| ||||
Sbjct 23144 AGCGACCTCGGATTCAGTGACG---ACGGCTACGATCTGCCCGCGCTCACCGTGCGCTGG 23200
Query 42562 CATGAGGT 42569
|| |||||
Sbjct 23201 CACGAGGT 23208
Score = 141 bits (156), Expect = 3e-29
Identities = 207/287 (72%), Gaps = 22/287 (8%)
Strand=Plus/Plus
Query 43953 CCTGCCTGCCACGTTCATGGCCATCGC-CCCGGGATCGTGGTCACC-TC---ACGTGTGG 44007
|||||| ||| |||||||| ||||| ||||| | | |||| || ||||||||
Sbjct 25777 CCTGCCGCGCACCTTCATGGCGATCGCGCCCGGCAGC-----CACCATCCCGACGTGTGG 25831
Query 44008 CACGACGTGAACCGGATGATCACCTTGAACGGGGAGCAGAAACGCCGCAA---CGTCCAA 44064
||||| | |||||| || | ||||| |||||| |||||| || | |
Sbjct 25832 GACGACATCGTGCGGATGCAGACGCTCAACGGCGAGCAGGT---CCGCAAGGGCGCCGAG 25888
Query 44065 ATGCACGTGTGCCCCCTGCAGTTCGACATCGTTGACCGGCTGATCACTCGCTTCTCGAAT 44124
| |||||| |||||||| |||||||||||||| |||||||||||| || | ||| |
Sbjct 25889 AAGCACGTCTGCCCCCTCCAGTTCGACATCGTCGACCGGCTGATCGAGCGATACTCTATG 25948
Query 44125 CCTGGCGAGTTGGTGTTCGACCCGTTCGGCGGGCTGGGCACCGTGCCGTTGCGGGCTCTG 44184
| |||||| |||||||||| |||||| |||| || |||||||||||| |||| || |
Sbjct 25949 CGCGGCGAGCTGGTGTTCGATCCGTTCTGCGGCCTCGGCACCGTGCCGATGCGCGC---G 26005
Query 44185 AAACTT---GGTCGCCGCGGCCGTGGTGTCGAGCTGAATCCCGGCTA 44228
| ||| |||||||||||| || ||| || || |||| |||
Sbjct 26006 ATCCTTGCCGGTCGCCGCGGCGCCGGCAGCGAACTCAACCCCGACTA 26052
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 179965378381608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |