Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_021301.1 Length=56279 Score E Sequences producing significant alignments: (Bits) Value seq559 379 7e-101 >seq559 Length=35318 Score = 379 bits (420), Expect = 7e-101 Identities = 603/851 (71%), Gaps = 28/851 (3%) Strand=Plus/Plus Query 42975 CAAGTTCAACGACCTCATCCAGAGCG-TGCACCGGATTCAACGGTTCGGCCAAACCCACC 43033 ||||||||||||| |||||||| ||| | |||||| | || || ||| || | |||| Sbjct 24654 CAAGTTCAACGACTTCATCCAG-GCGATCCACCGGCTCCAGCGCTTCCAGCAGTCGCACC 24712 Query 43034 CTTGCACCGCCCATCTCATCCACTCCGAAACCGAACGGGAAGTGGTGCGGGTCATCCGCG 43093 | | | | | |||||||| ||||||| || ||||| || ||||| | | | | | Sbjct 24713 CGGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGTGCGCGACCTGCAGG 24772 Query 43094 AGAAATGGGCACAACACCGAGAGTTGACATCAACGATGACCGACATCATTCACGAGTACG 43153 ||| ||||| | ||| ||| ||| | ||| |||| ||||| | ||| || | Sbjct 24773 CGAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGATCATCCGCGAATATG 24832 Query 43154 GGCTTGACCCCGAGG-CAATTTCGGAAGCGCTGCAACGCTCCATCGGGTGCGAACGCATC 43212 | || | | || | | |||| ||||| | ||||| ||||| ||| || Sbjct 24833 GCCTGCAGCATGACGTCGCCCTCGGC-GCGCTCAAGCGCTCGATCGGCGTCGAGCGGCAG 24891 Query 43213 GAAGCCTCTGGTGAGGGCTGGTTGTTCGCCAACAACGACTGCGTGCCCGAAACCGAGTCC 43272 || | | |||| || |||||| | | || ||||||||||||| || | | Sbjct 24892 GAGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCGATGAGGCTGCCCGG 24951 Query 43273 ATGGGCGACAGCTCGGTGGACCTGATTGTCACCAGCATTCCGTTCTCCAACCACTACGAG 43332 ||| ||| | ||||| |||||||| |||||| ||| |||||| ||||||||||||| Sbjct 24952 CTGGACGAAGGATCGGTCGACCTGATCGTCACCTCCATCCCGTTCAGCAACCACTACGAG 25011 Query 43333 TACACGCCGAGCTACAACGACTTCGGCCACACCGACGACAACGCGCATTTCTGGGCGCAG 43392 |||||||||||||||||||||||||||||||| ||||| ||| |||||||| |||||| Sbjct 25012 TACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGCATTTCTTCGCGCAG 25071 Query 43393 ATGGACTACCTCACACCGCAGCTGCTGCGCATCCTCGCGCCGGGCCGTATCTACGCCTG- 43451 ||||| | || || ||| | ||||| || || ||||||||||| | |||||| Sbjct 25072 ATGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCGCCGGGCCGGCT---CGCCTGC 25128 Query 43452 --CCACGTCAAGGACCGCATCTTGTTCGGAAACGTCACCGGCGCCGGCGTGCCCACAGTG 43509 |||||| |||||||| ||| ||||||| || ||||||| || ||||| || || Sbjct 25129 ATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGGGTGTGCCGACCGTC 25188 Query 43510 TCCCCGTTCCACGCCGAGGCGATCTTCCAC---GGCCGCAAACACGGCTTCGACTACCTC 43566 |||||||||||| || ||| ||| ||| ||||||||| | | | | Sbjct 25189 AATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC---CACGGCTTCCAGTTCATG 25245 Query 43567 GGCATGATCACCGTGGTCACCGATGTGGTGCGGGAAAACAACCAGACGTACCGGCTGGGC 43626 |||||||||||||| |||||||| || ||||| || ||||||||||| ||||| ||| Sbjct 25246 GGCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCCTG--- 25302 Query 43627 TGGT-CGGAGCAGTGC--AAAGACGCCACCAAGATGGGTGTCGGCTCCCCGGAATACGTT 43683 | || | | | ||| || |||| ||| |||||||| |||| ||| |||||||| Sbjct 25303 TCGTACAGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCAGCCCCGAATACGTG 25362 Query 43684 CTGCTGTTCCACAAACCGCAAACAGACAGGTCGAAGGGATACGCCGACACACCCGTCACC 43743 |||||| | | ||| ||||||| ||| | || || || |||||||| || |||||| Sbjct 25363 CTGCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCCGACACGCCGGTCACC 25422 Query 43744 AAATCCAAGGACGA---ATACACCCGTGCCCGTTGGCAGGTGGACGCGCACGCGTTCTGG 43800 || || | ||| |||| || || || |||||||| ||||| ||||| |||||| Sbjct 25423 AA--GGAACG-CGAGAGCTACAGCCTGGCGCGGTGGCAGGTCGACGCCCACGCCTTCTGG 25479 Query 43801 CGATCGAGCGG 43811 || || ||||| Sbjct 25480 CGCTCCAGCGG 25490 Score = 268 bits (296), Expect = 3e-67 Identities = 318/428 (74%), Gaps = 6/428 (1%) Strand=Plus/Plus Query 42145 ATCTATCTCACCAACTATGAGAGTGTCCGCGACGGCAAGCTGGACCCGACACTGTTCACG 42204 |||| || ||||| || ||||| ||||||||||||||| | ||| ||| ||||| Sbjct 22784 ATCTTCCTGACCAATTACGAGAGCGTCCGCGACGGCAAGGTCGACGTCACAACCTTCACC 22843 Query 42205 GCCGTCTCACTCGATGAGGCATCCGTGCTGCGCTCGTTCGGGTCGAAGACCTACCAGTCG 42264 |||||| || || ||||| | | || |||||||||||||| ||||||| |||| || Sbjct 22844 GCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGGGTCAAAGACCTTCCAGACG 22903 Query 42265 TTCCTGGAGCTGTTCGACGGCGTGCCCTATCGGTTTGTCGCCACCGCGACGCCGTCTCCG 42324 |||||| ||| ||||| | ||||| || || |||||||| ||||| || || || || Sbjct 22904 TTCCTGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCCTCGCCC 22963 Query 42325 AATCGCTTCAAGGAGCTGATCCACTACGCGGGCTATCTCGGTGTGATGGACACCGGCGCA 42384 || |||| ||||||||||||||| ||||| || | ||||| ||||||||||||||| | Sbjct 22964 AACCGCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACCGGCCAA 23023 Query 42385 GCGTTGACGCGTTGGTTCCAGCGGGACTCCACGAAGGCGAACAACCTCACCCTCTATCCC 42444 ||| | || || | |||||||| || | ||||||| | | ||||||||||| || Sbjct 23024 GCGCTCACCCGCTTCTTCCAGCGCAACAGCGAGAAGGCGGGCGATCTCACCCTCTACCCG 23083 Query 42445 CACAAGGAGCGTGAGTTCTTTCTGTGGCTCAACACCTGGGCCGCGTTCGTGCAATCGCCG 42504 |||||||| | ||||||| |||||||| || | |||||||| ||| |||| ||| Sbjct 23084 CACAAGGAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGGCCGTTTTCCTGCAGCGCCCG 23143 Query 42505 GCAGACCTCGG--TCA-CGACGCCACCGGATACGACCTGCCGCCCCTGGAGGTGGTCTGG 42561 |||||||| ||| |||| ||| ||||| ||||| | || ||| |||| Sbjct 23144 AGCGACCTCGGATTCAGTGACG---ACGGCTACGATCTGCCCGCGCTCACCGTGCGCTGG 23200 Query 42562 CATGAGGT 42569 || ||||| Sbjct 23201 CACGAGGT 23208 Score = 141 bits (156), Expect = 3e-29 Identities = 207/287 (72%), Gaps = 22/287 (8%) Strand=Plus/Plus Query 43953 CCTGCCTGCCACGTTCATGGCCATCGC-CCCGGGATCGTGGTCACC-TC---ACGTGTGG 44007 |||||| ||| |||||||| ||||| ||||| | | |||| || |||||||| Sbjct 25777 CCTGCCGCGCACCTTCATGGCGATCGCGCCCGGCAGC-----CACCATCCCGACGTGTGG 25831 Query 44008 CACGACGTGAACCGGATGATCACCTTGAACGGGGAGCAGAAACGCCGCAA---CGTCCAA 44064 ||||| | |||||| || | ||||| |||||| |||||| || | | Sbjct 25832 GACGACATCGTGCGGATGCAGACGCTCAACGGCGAGCAGGT---CCGCAAGGGCGCCGAG 25888 Query 44065 ATGCACGTGTGCCCCCTGCAGTTCGACATCGTTGACCGGCTGATCACTCGCTTCTCGAAT 44124 | |||||| |||||||| |||||||||||||| |||||||||||| || | ||| | Sbjct 25889 AAGCACGTCTGCCCCCTCCAGTTCGACATCGTCGACCGGCTGATCGAGCGATACTCTATG 25948 Query 44125 CCTGGCGAGTTGGTGTTCGACCCGTTCGGCGGGCTGGGCACCGTGCCGTTGCGGGCTCTG 44184 | |||||| |||||||||| |||||| |||| || |||||||||||| |||| || | Sbjct 25949 CGCGGCGAGCTGGTGTTCGATCCGTTCTGCGGCCTCGGCACCGTGCCGATGCGCGC---G 26005 Query 44185 AAACTT---GGTCGCCGCGGCCGTGGTGTCGAGCTGAATCCCGGCTA 44228 | ||| |||||||||||| || ||| || || |||| ||| Sbjct 26006 ATCCTTGCCGGTCGCCGCGGCGCCGGCAGCGAACTCAACCCCGACTA 26052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 179965378381608