Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2528 129 2e-24 seq2281 84.2 6e-11 >seq2528 Length=594046 Score = 129 bits (142), Expect = 2e-24 Identities = 407/625 (65%), Gaps = 7/625 (1%) Strand=Plus/Minus Query 155910 ACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAA-AGGTCCCTTGCCTTTGA 155968 || |||| |||||| | ||| | ||| | |||| ||||| || || | || | | | Sbjct 61374 ACCCGCTTCATAAACAAATCTGGGGTCCAGAGAGCA-AGAAAGAGATCACGAGC-TCTCA 61317 Query 155969 CT-CCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTG 156027 || |||| | ||||| || || || || || || ||||| ||||| | || | Sbjct 61316 CTTCCTCTTTTCCGTGGTTTTTACGGAGATCCAAAAATTCGAAGATATCGGAGTGCCAGG 61257 Query 156028 GCTCCAGATACATAGCAAAACTACCATTCC---TCTTGCCACCCTGATCTACATACCGAG 156084 | || ||||| || || || ||| | | ||||||||||| || ||||| |||| Sbjct 61256 GTTCAAGATAGATGGCGAAGGCACCTGGTCGTTTATTGCCACCCTGGTCAACATAGCGAG 61197 Query 156085 CAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGC 156144 |||| || |||||||||| ||||| || || || || || || | |||||| ||||| Sbjct 61196 CAGTGTTGTTGAAGACACGGAGCATGGGGATGATTCCGTTAGAGGAGCCATTTGTTCCTG 61137 Query 156145 GAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATT 156204 ||| | || |||| | || | | || | || || ||||||||||| | | Sbjct 61136 CAATGTAGGAGCCAGTGGCACGGATACGGTGTACATTAAGACCAATACCACCAGCTGTCT 61077 Query 156205 TAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCA 156264 | ||||| | || || || | |||| | | |||||||| ||| ||| || | || Sbjct 61076 TGGAAATCAGTGCACAGGTTTTGAGCGTATCGTAGATACCTTCGATACTATCCTCCTTCA 61017 Query 156265 TTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAG 156324 | | || | || || | ||| || |||| ||||| |||||||| || || | Sbjct 61016 TGTCGATGAGGAAACAGGATGCCATTTGTGGCTGTGGAGTTCCCGCGTTGAAAAGAGTGG 60957 Query 156325 GTGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAA 156384 | | || ||| | || | || | ||||| ||| ||| || || | |||||||| Sbjct 60956 GAGAAGCGTGAGTGAAGAATTTTTGGGACATCAAATTGTAAGTTTCAATCGCCTTCTCAA 60897 Query 156385 GATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAA 156444 | |||||||||| | | |||| ||| ||| ||||| |||||||| ||| Sbjct 60896 TGTCCTCGCCGTGAATACCAACCGCAACCCGCATAATCATGTGCTGCGGACGCTCGGCAA 60837 Query 156445 TCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAA 156504 | |||| || |||| || || | || || || || || || || ||||| | Sbjct 60836 CCTTGCCATTGATCCGCAACAGATAAGACCGCTCTAGTGTCTTGAAGCCAAAATATTGGT 60777 Query 156505 ACAGAAAATCACGGTTGTAATCAAT 156529 | ||||||||| | |||| |||| Sbjct 60776 AGTTAAAATCACGATCGTAAACAAT 60752 >seq2281 Length=779450 Score = 84.2 bits (92), Expect = 6e-11 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 || || || | |||||| ||||| ||||||||||| ||||| |||||||||||||| || Sbjct 730594 GCGCCATGAGCAATCATGCAATCGCGCTCCATTTCTCCGAATCGAAGACCACCATCACGC 730653 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604 || | ||| || ||||||| | || | | | | ||||| || || ||| Sbjct 730654 GCACGACCTTCCACAGGCTGCCTTGTCAAAATCTGAGTGGGACCACGGGCTCGAGCATGG 730713 Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGAT 251660 ||| |||| ||||||||| ||| |||||||| ||| || || | ||| || Sbjct 730714 ATCTTGTCATCCACCATATGCCGGAGGCGCTGGTAATATGTCGGTCCCAGGAAAAT 730769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471766231725988