Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq2528 129 2e-24
seq2281 84.2 6e-11
>seq2528
Length=594046
Score = 129 bits (142), Expect = 2e-24
Identities = 407/625 (65%), Gaps = 7/625 (1%)
Strand=Plus/Minus
Query 155910 ACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAA-AGGTCCCTTGCCTTTGA 155968
|| |||| |||||| | ||| | ||| | |||| ||||| || || | || | | |
Sbjct 61374 ACCCGCTTCATAAACAAATCTGGGGTCCAGAGAGCA-AGAAAGAGATCACGAGC-TCTCA 61317
Query 155969 CT-CCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTG 156027
|| |||| | ||||| || || || || || || ||||| ||||| | || |
Sbjct 61316 CTTCCTCTTTTCCGTGGTTTTTACGGAGATCCAAAAATTCGAAGATATCGGAGTGCCAGG 61257
Query 156028 GCTCCAGATACATAGCAAAACTACCATTCC---TCTTGCCACCCTGATCTACATACCGAG 156084
| || ||||| || || || ||| | | ||||||||||| || ||||| ||||
Sbjct 61256 GTTCAAGATAGATGGCGAAGGCACCTGGTCGTTTATTGCCACCCTGGTCAACATAGCGAG 61197
Query 156085 CAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGC 156144
|||| || |||||||||| ||||| || || || || || || | |||||| |||||
Sbjct 61196 CAGTGTTGTTGAAGACACGGAGCATGGGGATGATTCCGTTAGAGGAGCCATTTGTTCCTG 61137
Query 156145 GAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATT 156204
||| | || |||| | || | | || | || || ||||||||||| | |
Sbjct 61136 CAATGTAGGAGCCAGTGGCACGGATACGGTGTACATTAAGACCAATACCACCAGCTGTCT 61077
Query 156205 TAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCA 156264
| ||||| | || || || | |||| | | |||||||| ||| ||| || | ||
Sbjct 61076 TGGAAATCAGTGCACAGGTTTTGAGCGTATCGTAGATACCTTCGATACTATCCTCCTTCA 61017
Query 156265 TTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAG 156324
| | || | || || | ||| || |||| ||||| |||||||| || || |
Sbjct 61016 TGTCGATGAGGAAACAGGATGCCATTTGTGGCTGTGGAGTTCCCGCGTTGAAAAGAGTGG 60957
Query 156325 GTGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAA 156384
| | || ||| | || | || | ||||| ||| ||| || || | ||||||||
Sbjct 60956 GAGAAGCGTGAGTGAAGAATTTTTGGGACATCAAATTGTAAGTTTCAATCGCCTTCTCAA 60897
Query 156385 GATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAA 156444
| |||||||||| | | |||| ||| ||| ||||| |||||||| |||
Sbjct 60896 TGTCCTCGCCGTGAATACCAACCGCAACCCGCATAATCATGTGCTGCGGACGCTCGGCAA 60837
Query 156445 TCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAA 156504
| |||| || |||| || || | || || || || || || || ||||| |
Sbjct 60836 CCTTGCCATTGATCCGCAACAGATAAGACCGCTCTAGTGTCTTGAAGCCAAAATATTGGT 60777
Query 156505 ACAGAAAATCACGGTTGTAATCAAT 156529
| ||||||||| | |||| ||||
Sbjct 60776 AGTTAAAATCACGATCGTAAACAAT 60752
>seq2281
Length=779450
Score = 84.2 bits (92), Expect = 6e-11
Identities = 124/176 (70%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
|| || || | |||||| ||||| ||||||||||| ||||| |||||||||||||| ||
Sbjct 730594 GCGCCATGAGCAATCATGCAATCGCGCTCCATTTCTCCGAATCGAAGACCACCATCACGC 730653
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604
|| | ||| || ||||||| | || | | | | ||||| || || |||
Sbjct 730654 GCACGACCTTCCACAGGCTGCCTTGTCAAAATCTGAGTGGGACCACGGGCTCGAGCATGG 730713
Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGAT 251660
||| |||| ||||||||| ||| |||||||| ||| || || | ||| ||
Sbjct 730714 ATCTTGTCATCCACCATATGCCGGAGGCGCTGGTAATATGTCGGTCCCAGGAAAAT 730769
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471766231725988
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |