Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_021339.1
Length=51077
Score E
Sequences producing significant alignments: (Bits) Value
seq741 187 8e-43
>seq741
Length=35645
Score = 187 bits (206), Expect = 8e-43
Identities = 241/331 (73%), Gaps = 4/331 (1%)
Strand=Plus/Minus
Query 40167 CCGTACGTCGCGATCTGCGCGACCTTGTCGGCCCCGTACTTCCGGGTGACGTACTGGATG 40226
||| | ||||||||||| ||| ||| |||||||| | ||||||| ||||
Sbjct 10688 CCGAAGGTCGCGATCTGGCTGACGGCCTCGCGGCCGTACTTGTCCTTCACGTACTCGATG 10629
Query 40227 ACCTCGCCACGAC--GCCGGTCATCGAAGTCGATGTCGACATCGGGCATGGACACGCGCT 40284
||| | | || ||| | || |||||||||||||| || ||||| ||||||||||
Sbjct 10628 ACCCGGTCCCGGTTGGCCTGGCA--GAAGTCGATGTCGAAGTCCGGCATCGACACGCGCT 10571
Query 40285 CGGGGTTCAGGAAGCGCTCGAAGATGAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCC 40344
| |||||||||||||||||||| | || || || || || |||||||||||||||
Sbjct 10570 CCGGGTTCAGGAAGCGCTCGAACAGCAGGTTGTACTGGAGGGGATCGAGGTCGGTGATCT 10511
Query 40345 CGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAGCCCCGCCCAGGGCCGACCCAGACCC 40404
||| ||||| |||||||| ||||| | || || || || ||||||||| | |
Sbjct 10510 TGAGCGAATAGGCCACCAGCGATCCGGCGCCTGATCCACGGCCCGGGCCGACCGGGCAGC 10451
Query 40405 CGTTCTCCTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAAGTACGACGGGAACCCCA 40464
|||| | ||| |||||| ||||||||| | |||| ||||||||| ||||| ||||
Sbjct 10450 CGTTGTTCTTGGCCCAGTTGATGAAGTCGCCCACGATGAGGAAGTAACCGGGGAATCCCA 10391
Query 40465 TCTGGATGATCATGTCGATCTCGTACTGGAG 40495
||| | ||| | |||||||| ||| |||
Sbjct 10390 TCTTCAGGATGGTCCCGATCTCGAACTCGAG 10360
Score = 127 bits (140), Expect = 7e-25
Identities = 209/298 (70%), Gaps = 14/298 (5%)
Strand=Plus/Minus
Query 39109 ACTCGGCCGGGTAGTGCGTCTTCAACCACGCCGTGCGGTACGCGATGAGTCCGTACGCCG 39168
||||||||| ||||||| ||||| ||| | ||| ||||||||| || |||||| |
Sbjct 11710 ACTCGGCCGTGTAGTGCACCTTCAGCCAGCCGGTGTGGTACGCGAGCAGCGAGTACGCGG 11651
Query 39169 CCGAGTGCGCCTTGTTGAAGGCGTAGCCAGCGAAGGGGACCAGCACGTCCCACA------ 39222
| | ||||| |||||||||| ||||||| ||||| ||| || ||| | |
Sbjct 11650 CGGCGTGCGACTTGTTGAAGCCGTAGCCCGCGAATTTCTCCATCAGGTCGAAGATCTCGT 11591
Query 39223 CTGCCTGGATG-GCACCGTCCGAGTAGCCTCGCTCGCGCGCTCCCTTCTGGAAGTTCACG 39281
| |||| || | ||| | | | |||| ||||| | ||| |||| || |
Sbjct 11590 CCGCCTTCTCCTGCGCGATCCCATT--CTTCGC-CGCGCCCGCCC----GGAAAATCTCC 11538
Query 39282 AACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATCGCCCGGCGAAGCAGGTCGGCC 39341
| || ||||| |||||| |||||||||||||||||||||||| |||||||| ||
Sbjct 11537 CGGTGCTGGGCCATCTCCTCGGCCTTCTTCTTGCCCATCGCCCGGCGCAGCAGGTCCGCG 11478
Query 39342 TGACCCAGGGTGTACCCGGCCATGACCTGTGCAACCTTCTGCACCTGCTCCTGGTAGA 39399
||||| ||||| ||| ||| || ||| || || | |||||| ||||||||||
Sbjct 11477 CCGCCCAGCGTGTAGCCGCCCAGGATCTGCGCGGTCTGCATCACCTGTTCCTGGTAGA 11420
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 163319516851032
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |