Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_021538.1 Length=59626 Score E Sequences producing significant alignments: (Bits) Value seq559 340 7e-89 >seq559 Length=35318 Score = 340 bits (376), Expect = 7e-89 Identities = 631/909 (69%), Gaps = 28/909 (3%) Strand=Plus/Plus Query 46202 GGGCAG-GGCATGAACCTGCAGC---AGGCCCACACCTGTGTGTACATCGGCATCACGCA 46257 |||||| |||| |||||||||| | |||| | |||| | ||||| | | || Sbjct 24594 GGGCAGCGGCACCAACCTGCAGCGCCACTGCCACCGCGCCGTGTTCGTCGGCGT-AGGCT 24652 Query 46258 -CAAGTTCAACGATCTAATCCAGAGCTTGCACCGGATTCAGCGGTTCGGCCAAACCCATC 46316 |||||||||||| | |||||| | |||||| | ||||| ||| || | || | Sbjct 24653 TCAAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGCTTCCAGCAGTCGCACC 24712 Query 46317 CCTGCAAAGCCCATTTGATCCACTCCGAAACCGAGCGGGAAGTGGTGCGGGTCATCCGCG 46376 | | | | | | | |||||| ||||||| |||||||| || ||||| | | | | | Sbjct 24713 CGGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGTGCGCGACCTGCAGG 24772 Query 46377 AGAAATGGGCACAACACCGAGAGTTGACATCAACGATGACCGACATCATTCATGAGTACG 46436 ||| ||||| | ||| ||| ||| | ||| |||| ||||| | || || | Sbjct 24773 CGAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGATCATCCGCGAATATG 24832 Query 46437 GACTTGACCCCGAAG-CGATCTCCGAGGCGCTGCAACGCTCCATCGGATGTGAGCGCATC 46495 | || | | || | || ||| | | |||| | ||||| ||||| ||||| Sbjct 24833 GCCTGCAGCATGACGTCGCCCTCGGCG-CGCTCAAGCGCTCGATCGGCGTCGAGCGGCAG 24891 Query 46496 GAAGCATCCGGTGAGGGATGGGTGTTCGCCAACAACGACTGCGTTCACGAAACCAAGAGC 46555 || | | || || || ||| | | || ||||||||||||| | || | | Sbjct 24892 GAGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCGATGAGGCTGCCCGG 24951 Query 46556 ATGGCAGACGATTCGGTGGATCTGATCGTCACCAGCATTCCGTTCTCCAACCACTACGAG 46615 ||| || | ||||| || |||||||||||| ||| |||||| ||||||||||||| Sbjct 24952 CTGGACGAAGGATCGGTCGACCTGATCGTCACCTCCATCCCGTTCAGCAACCACTACGAG 25011 Query 46616 TACACGCCGAGCTACAACGACTTCGGCCACACCGACAACAACGAGCACTTCTGGCAGCAG 46675 |||||||||||||||||||||||||||||||| ||| | ||| ||| |||| |||| Sbjct 25012 TACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGCATTTCTTCGCGCAG 25071 Query 46676 ATGGACTACCTCACACCGCAGCTGCTGCGCATCCTCTCGCCGGGCCGTATCTACGCCTG- 46734 ||||| | || || ||| | ||||| || || |||||||||| | |||||| Sbjct 25072 ATGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCGCCGGGCCGGCT---CGCCTGC 25128 Query 46735 --CCACGTCAAGGACCGCATCTTGTTCGGAAACGTCACCGGCGCCGGCGTGCCCACGGTG 46792 |||||| |||||||| ||| ||||||| || ||||||| || ||||| || || Sbjct 25129 ATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGGGTGTGCCGACCGTC 25188 Query 46793 TCACCCTTCCACGCCGAGGCGATCTTCCAC-GGACGCAAACACGGCTTCGACTACCTCGG 46851 || ||||||||| || ||| ||| | || ||||||||| | | | | || Sbjct 25189 AATCCGTTCCACGCCAAGTGCATCGAGCACTATATGC-GCCACGGCTTCCAGTTCATGGG 25247 Query 46852 CATGATCACCGTCATCACCGATGTGGTCCGGGAAAACAACCAGACGTACCGGCTGGGCTG 46911 ||||||||||||| ||||||| || || || || ||||||||||| ||||| ||| | Sbjct 25248 CATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCCTG---TC 25304 Query 46912 GT-CAGAGCAGTGC--AAAGACGCCACCAAGATGGGCGTCGGCTCCCCGGAATACATTCT 46968 || ||| | ||| || |||| ||| ||||||||| |||| ||| |||||| | || Sbjct 25305 GTACAGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCAGCCCCGAATACGTGCT 25364 Query 46969 GTTGTTCCACAAACCGCAAACAGACAGGTCGAAGGGATACGCCGACACACCCGTCACCAA 47028 | || | | ||| ||||||| ||| | || || || |||||||| || |||||||| Sbjct 25365 GCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCCGACACGCCGGTCACCAA 25424 Query 47029 ATCCAAGGACGA---CTACACCCGTGCCCGTTGGCAGGTGGACGCGCACGCATTCTGGCG 47085 || | ||| ||||| || || || |||||||| ||||| ||||| |||||||| Sbjct 25425 --GGAACG-CGAGAGCTACAGCCTGGCGCGGTGGCAGGTCGACGCCCACGCCTTCTGGCG 25481 Query 47086 CTCGAGCGG 47094 ||| ||||| Sbjct 25482 CTCCAGCGG 25490 Score = 268 bits (296), Expect = 4e-67 Identities = 320/429 (75%), Gaps = 8/429 (2%) Strand=Plus/Plus Query 45428 ATCTATCTCACCAACTATGAGAGTGTCCGCGACGGAAAGTTGGACCCGACACTGTTCACG 45487 |||| || ||||| || ||||| ||||||||||| ||| | ||| ||| ||||| Sbjct 22784 ATCTTCCTGACCAATTACGAGAGCGTCCGCGACGGCAAGGTCGACGTCACAACCTTCACC 22843 Query 45488 GCCGTCTCACTCGATGAGGCCAGCGTGTTGCGGTCTTTCGGGTCCAAGACGTACCAGTCG 45547 |||||| || || ||||| ||| | | || || |||||||| ||||| | |||| || Sbjct 22844 GCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGGGTCAAAGACCTTCCAGACG 22903 Query 45548 TTCCTCGAGCTGTTCGACGGGGTGCCCTACCGGTACGTCGCGACGGCCACGCCGTCACCG 45607 ||||| ||| ||||| | |||||| ||||| | |||||||| ||||| || || || Sbjct 22904 TTCCTGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCCTCGCCC 22963 Query 45608 AACCGGTACAAGGAGCTGATTCACTACGCGGGCTATCTCGGGGTGATGGACACCGGGGCA 45667 ||||| |||||||||||||| || ||||| || | ||||| |||||||||||||| | Sbjct 22964 AACCGCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACCGGCCAA 23023 Query 45668 GCGCTCACGCGTTGGTTCCAGCGGGAC-TCGACGAAGGCGAACAACCTCACCCTCTACCC 45726 |||||||| || | |||||||| || ||| ||||||| | | |||||||||||||| Sbjct 23024 GCGCTCACCCGCTTCTTCCAGCGCAACAGCGA-GAAGGCGGGCGATCTCACCCTCTACCC 23082 Query 45727 ACACAAGGAGCGCGAGTTCTGGCTGTGGCTGAACACGTGGGCTGCGTTCGTGCAATCACC 45786 |||||||| | |||||||||||||||||||| | ||||| | ||| |||| || Sbjct 23083 GCACAAGGAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGGCCGTTTTCCTGCAGCGCCC 23142 Query 45787 GGCCGACCTAGG--TCA-CGACGCCACCGGCTATGACCTGCCGCCGCTGGAGGTGTTGTG 45843 | |||||| || ||| |||| |||||| || ||||| |||| ||| || Sbjct 23143 GAGCGACCTCGGATTCAGTGACG---ACGGCTACGATCTGCCCGCGCTCACCGTGCGCTG 23199 Query 45844 GCATGAGGT 45852 ||| ||||| Sbjct 23200 GCACGAGGT 23208 Score = 105 bits (116), Expect = 3e-18 Identities = 104/133 (78%), Gaps = 6/133 (5%) Strand=Plus/Plus Query 48349 CTGCCCCTTGCAGTTCGACATCGTTGACCGGCTGATCACTCGCTTCTCGAATCCTGGCGA 48408 ||||||| | |||||||||||||| |||||||||||| || | ||| | | ||||| Sbjct 25897 CTGCCCCCTCCAGTTCGACATCGTCGACCGGCTGATCGAGCGATACTCTATGCGCGGCGA 25956 Query 48409 GTTGGTGTTCGACCCGTTCGGCGGGCTGGGCACCGTGCCGTTGCGGGCACTGAAACTT-- 48466 | |||||||||| |||||| |||| || |||||||||||| |||| || || ||| Sbjct 25957 GCTGGTGTTCGATCCGTTCTGCGGCCTCGGCACCGTGCCGATGCGCGC---GATCCTTGC 26013 Query 48467 -GGTCGGCGCGGC 48478 ||||| |||||| Sbjct 26014 CGGTCGCCGCGGC 26026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190675431926944