Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_021560.1
Length=53102
Score E
Sequences producing significant alignments: (Bits) Value
seq559 161 3e-35
>seq559
Length=35318
Score = 161 bits (178), Expect = 3e-35
Identities = 408/606 (67%), Gaps = 12/606 (2%)
Strand=Plus/Plus
Query 38812 TTCCTCGGCATTGGTCACAAGTTCAATGACTTCATCCAGGCCGTTCACCGCATCCAGCGA 38871
||| ||||| | || ||||||||| |||||||||||||| | ||||| |||||||
Sbjct 24637 TTCGTCGGCGTAGGCTTCAAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGC 24696
Query 38872 TTTCTCCAGACGCACAAAGTTCGCATCGACCTCATCTACACCGAAGCGGAACGACCGGT- 38930
|| | ||| ||||| || ||||| ||||| || ||||| | || || |||
Sbjct 24697 TTCCAGCAGTCGCACCCGGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTC 24756
Query 38931 GCGCGACAACCTCGAAGCCAAATGGCGACGCCACGTGGAGCAGATGGCAATCATGACAGA 38990
| ||| | |||| | || || ||| || |||| ||||| || || |||| | ||
Sbjct 24757 GTGCG-CGACCTGCAGGCGAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGA 24815
Query 38991 TATCATTCGCAAATATGGCCTGTCGTCTG-CGGCGATGGCTGAAACCCTCACGCGCGCCA 39049
||||| ||| ||||||||||| | || || || | | | |||| |||| | |
Sbjct 24816 GATCATCCGCGAATATGGCCTGCAGCATGACGTCGCCCTCGGCG-CGCTCAAGCGCTCGA 24874
Query 39050 TGGGTGTTGAGCGGATCGAAGTTTGCGGCCCGGGCTATCGGCTGGTCAACAATGATTGCG 39109
| || || |||||| || || ||| |||| ||||| |||| || ||||
Sbjct 24875 TCGGCGTCGAGCGGCAGGAGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCG 24934
Query 39110 T-GATGGAG-TGCAAGAAGATGGGCTCCAACAGCGTT-GACCTGATTGTCACATCGATCC 39166
| |||| | ||| | | ||| | | | || | |||||||| ||||| || ||||
Sbjct 24935 TCGATGAGGCTGCCCG--GCTGGACGA-AGGATCGGTCGACCTGATCGTCACCTCCATCC 24991
Query 39167 CGTTTTCCACCCAATACGAGTATTCGCCGAACTATGCCGACTTCGGTCATACCGAAGACA 39226
|||| || ||| |||||||| |||||| ||| ||||||||| || || || ||
Sbjct 24992 CGTTCAGCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACGGACGATG 25051
Query 39227 ATGAGCATTTCTGGCAGCAGATGGATTTCCTCATCCCCGAAT-TGCTGCGGGTTCTGGCG 39285
| | |||||||| |||||||||| || | | ||||| |||| || | ||||||
Sbjct 25052 ACGGGCATTTCTTCGCGCAGATGGATCATCTGA-CGCCGAACCTGCTCCGTGCGCTGGCG 25110
Query 39286 CCGGGGCGTGTCGCCGCAATCCATGTGAAGGATCGCATCGTTCCCGGGGGTATGACGGGT 39345
||||| || ||||| ||||| |||||||| || ||| | ||| | |||| ||
Sbjct 25111 CCGGGCCGGCTCGCCTGCATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGC 25170
Query 39346 CTGGGGTTTCAAACCGTCTACCCGTTCTCCGACGATTGCATCGCCCGTTTCAAGCGGCAC 39405
||| | | |||||| | |||||| || | | ||||||| | | | ||| |||
Sbjct 25171 GAGGGTGTGCCGACCGTCAATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGCCAC 25230
Query 39406 GGGTTC 39411
|| |||
Sbjct 25231 GGCTTC 25236
Score = 89.7 bits (98), Expect = 2e-13
Identities = 275/422 (65%), Gaps = 9/422 (2%)
Strand=Plus/Plus
Query 38021 TGACGAACTACGAGACGGTGCGCGAGGGAAAGCTTGACCCCCGTCTGTTCACTGTCGCGT 38080
|||| || ||||||| || ||||| || ||| | ||| | ||||| | ||
Sbjct 22791 TGACCAATTACGAGAGCGTCCGCGACGGCAAGGTCGACGTCACAACCTTCACCGCCGTCA 22850
Query 38081 CGCTTGACGAGGCTGCCTGCCTTCGAGGGTTCGGTGGGACAAAGATATTCCGCGAGTTCA 38140
|| |||||||| | ||| || |||||| | |||||| |||| ||||
Sbjct 22851 GCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGG---GTCAAAGACCTTCCAGACGTTCC 22907
Query 38141 TGCGGCTGTTCGATGGCATCCGGTTCAAGTTCCTCGCCACGGCGACACCGTCACCAAACC 38200
||| ||| ||||| | | | || | || |||| || || || || || || ||||
Sbjct 22908 TGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCCTCGCCCAACC 22967
Query 38201 AATATGTAGAACTGCTGGCCTATTCCGCATTCCTCGAGGTTATGGATGTCGGCCAGGCAA 38260
|| || ||| | || ||| ||||||| || ||||| |||||| ||
Sbjct 22968 GCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACCGGCCAAGCGC 23027
Query 38261 AAACGCGGTTTTTCAAGCGCAATTCGGAAAAGGCCGACACGCTCACCATCCATCCGCATA 38320
|| || || ||| ||||||| || ||||| | | |||||| || | ||||| |
Sbjct 23028 TCACCCGCTTCTTCCAGCGCAACAGCGAGAAGGCGGGCGATCTCACCCTCTACCCGCACA 23087
Query 38321 AGGAGCATGAGTTCTGGCTGTGGGTCGCAAGCTGGGGACTGTTTGTCCAGAAGCCCTC-- 38378
|||| || ||||||||||||||| | ||||||| | |||| ||| | ||| | |
Sbjct 23088 AGGAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGG--CCGTTT-TCCTGCAGCGCCCGA 23144
Query 38379 -CGATCTCGGATGCTCTGATGAAGGTTACGAGCTACCGGAAATTGAGGTGCGCTGGCATG 38437
||| ||||||| | ||| || || ||||| || || | | ||||||||||| |
Sbjct 23145 GCGACCTCGGATTCAGTGACGACGGCTACGATCTGCCCGCGCTCACCGTGCGCTGGCACG 23204
Query 38438 AG 38439
||
Sbjct 23205 AG 23206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 169799307239232
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |