Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq435 127 2e-23 seq2528 118 1e-20 seq856 109 7e-18 seq2704 107 2e-17 >seq435 Length=10274 Score = 127 bits (140), Expect = 2e-23 Identities = 219/311 (70%), Gaps = 9/311 (3%) Strand=Plus/Minus Query 1726733 CCGTCGGTGCCGTTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGC 1726792 |||||||||||||||||||| ||||| | | || ||| | || || | ||||||||| Sbjct 4653 CCGTCGGTGCCGTTCTTGAACCCGATCGGCGCCGACAGGCCGGAGGCGAGTTCGCGGTGC 4594 Query 1726793 ACCTGGCTCTCGGTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCAAATA- 1726851 |||||||||||||| ||||||||||| | || ||||||| | |||||| | | || Sbjct 4593 ACCTGGCTCTCGGTGGTGCGCGCGCCGATCGCCCCCCACGAGATCAGGTCGCCGATGTAC 4534 Query 1726852 AGGGGCCACCAGAGGACTGAGAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAG 1726911 | ||| | | | | || |||||| | | | ||| | | | | || | || Sbjct 4533 TGCGGCGAGATCACGTC-CAGGAACTCGCTGCCGGCCGGCAGGCCCA-GCCG--GTTGAT 4478 Query 1726912 ATCGCGCAACAG--GCGGCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCG 1726969 ||| || ||| || |||||| || |||||| ||| | | |||| | | |||| Sbjct 4477 CTCGATCAGCAGCTGCCGCGCGATGC--GCAGGCCCTCGTCGATGCGGAAGCTCTCGTCC 4420 Query 1726970 AGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAG 1727029 |||| |||||| || |||||||||||| || || |||||||||||||| |||| || Sbjct 4419 AGGTACGGGTCGTTGATCAGGCCCTTCCAGCCCACCGTCGTGCGCGGCTTCTCGAAGTAC 4360 Query 1727030 GCGCGCATGAC 1727040 | ||||| || Sbjct 4359 ACCCGCATCAC 4349 >seq2528 Length=594046 Score = 118 bits (130), Expect = 1e-20 Identities = 181/258 (70%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| || ||||| || |||| ||| ||||| ||||||||||| | || ||||| || Sbjct 61213 CTGGTCAACATAGCGAGCAGTGTTGTTGAAGACACGGAGCATGGGGATGATTCCGTTAGA 61154 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 ||| || || || || | ||||| ||| | ||| || | ||| | || || Sbjct 61153 GGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTGGCACGGATACGGTGTACATTAAGACC 61094 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 || || || || | |||||| || || || || ||||||||| |||||||| || || Sbjct 61093 AATACCACCAGCTGTCTTGGAAATCAGTGCACAGGTTTTGAGCGTATCGTAGATACCTTC 61034 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 ||| || |||||||||| | ||| || || || | |||| || || | || || Sbjct 61033 GATACTATCCTCCTTCATGTCGATGAGGAAACAGGATGCCATTTGTGGCTGTGGAGTTCC 60974 Query 1630305 GGCGTTGAAGAGCGTGGG 1630322 |||||||| || ||||| Sbjct 60973 CGCGTTGAAAAGAGTGGG 60956 Score = 95.1 bits (104), Expect = 1e-13 Identities = 117/159 (74%), Gaps = 1/159 (1%) Strand=Plus/Minus Query 19045 AGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCG 19104 |||||||||| || || || || || || || ||| ||||| || ||||| |||| Sbjct 217520 AGGACAGCATTGGGGGAACAGTCACTTGTGTTATTCGGAACGTTCCTATTGGCCTGGGCG 217461 Query 19105 AGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCA 19164 |||| || || |||||| | || ||| || |||||||| ||||| || || || | Sbjct 217460 AGCCTTGTTTCGACAAGCTGGAAGCCAAACTTGCCCACGCGATGCTTAGTATTCCTGCAA 217401 Query 19165 CCAAGGGATTCGAGATTGGCAGCGGGTTTGC-GGGTGCG 19202 ||||||| |||||||||||| || ||||| || |||| Sbjct 217400 CCAAGGGCTTCGAGATTGGCTCTGGCTTTGCAGGCTGCG 217362 >seq856 Length=259896 Score = 109 bits (120), Expect = 7e-18 Identities = 93/115 (81%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || |||||||| || |||||| || ||||||| |||| |||||| | || |||||| Sbjct 30501 GCTGCGAACTACCTTGATATCAAGGCTTTGCTCGACGTTGGATGCAAGACCGTCGCCAAC 30442 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||| ||||| || || || ||||| ||||| |||||||||||||| || ||| Sbjct 30441 ATGATTAAGGGAAAATCTCCAGAGGAAATCCGAAAGACCTTTAACATTCAGAACG 30387 >seq2704 Length=633058 Score = 107 bits (118), Expect = 2e-17 Identities = 166/235 (71%), Gaps = 4/235 (2%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| ||||| |||||| ||| || ||||| ||||| || ||||| || Sbjct 56147 GCCTTCTGGTAGTCGCCGACGCGCTTCTCAAAGAAGTTTGTCTTACCGGACAGCGAAATG 56206 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCC--GAGCGACG 868808 ||||| | ||| ||||| | || || |||| ||| | || ||||||| Sbjct 56207 TTGTCCATGAAGTCGAATGGGTTCGTCGCATTATAGTACTTCTTATTACCAAGAGCGACA 56266 Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA 868868 |||| | ||||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct 56267 --AGCAACCTGTCGGCGACAAACTCGATGTATTGGCACATGAGTTTGGAGTTCATGCCGA 56324 Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTC 868923 || || || || | ||| ||| || ||||| ||||||||||| || || Sbjct 56325 GAAGGGCGCAAGGAAGGGCATCGGTCAAGAATTCTTTTTCGATCTCGACAGCTTC 56379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106915655803508