Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq435 127 2e-23
seq2528 118 1e-20
seq856 109 7e-18
seq2704 107 2e-17
>seq435
Length=10274
Score = 127 bits (140), Expect = 2e-23
Identities = 219/311 (70%), Gaps = 9/311 (3%)
Strand=Plus/Minus
Query 1726733 CCGTCGGTGCCGTTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGC 1726792
|||||||||||||||||||| ||||| | | || ||| | || || | |||||||||
Sbjct 4653 CCGTCGGTGCCGTTCTTGAACCCGATCGGCGCCGACAGGCCGGAGGCGAGTTCGCGGTGC 4594
Query 1726793 ACCTGGCTCTCGGTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCAAATA- 1726851
|||||||||||||| ||||||||||| | || ||||||| | |||||| | | ||
Sbjct 4593 ACCTGGCTCTCGGTGGTGCGCGCGCCGATCGCCCCCCACGAGATCAGGTCGCCGATGTAC 4534
Query 1726852 AGGGGCCACCAGAGGACTGAGAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAG 1726911
| ||| | | | | || |||||| | | | ||| | | | | || | ||
Sbjct 4533 TGCGGCGAGATCACGTC-CAGGAACTCGCTGCCGGCCGGCAGGCCCA-GCCG--GTTGAT 4478
Query 1726912 ATCGCGCAACAG--GCGGCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCG 1726969
||| || ||| || |||||| || |||||| ||| | | |||| | | ||||
Sbjct 4477 CTCGATCAGCAGCTGCCGCGCGATGC--GCAGGCCCTCGTCGATGCGGAAGCTCTCGTCC 4420
Query 1726970 AGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAG 1727029
|||| |||||| || |||||||||||| || || |||||||||||||| |||| ||
Sbjct 4419 AGGTACGGGTCGTTGATCAGGCCCTTCCAGCCCACCGTCGTGCGCGGCTTCTCGAAGTAC 4360
Query 1727030 GCGCGCATGAC 1727040
| ||||| ||
Sbjct 4359 ACCCGCATCAC 4349
>seq2528
Length=594046
Score = 118 bits (130), Expect = 1e-20
Identities = 181/258 (70%), Gaps = 0/258 (0%)
Strand=Plus/Minus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
|||||| || ||||| || |||| ||| ||||| ||||||||||| | || ||||| ||
Sbjct 61213 CTGGTCAACATAGCGAGCAGTGTTGTTGAAGACACGGAGCATGGGGATGATTCCGTTAGA 61154
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
||| || || || || | ||||| ||| | ||| || | ||| | || ||
Sbjct 61153 GGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTGGCACGGATACGGTGTACATTAAGACC 61094
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
|| || || || | |||||| || || || || ||||||||| |||||||| || ||
Sbjct 61093 AATACCACCAGCTGTCTTGGAAATCAGTGCACAGGTTTTGAGCGTATCGTAGATACCTTC 61034
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
||| || |||||||||| | ||| || || || | |||| || || | || ||
Sbjct 61033 GATACTATCCTCCTTCATGTCGATGAGGAAACAGGATGCCATTTGTGGCTGTGGAGTTCC 60974
Query 1630305 GGCGTTGAAGAGCGTGGG 1630322
|||||||| || |||||
Sbjct 60973 CGCGTTGAAAAGAGTGGG 60956
Score = 95.1 bits (104), Expect = 1e-13
Identities = 117/159 (74%), Gaps = 1/159 (1%)
Strand=Plus/Minus
Query 19045 AGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCG 19104
|||||||||| || || || || || || || ||| ||||| || ||||| ||||
Sbjct 217520 AGGACAGCATTGGGGGAACAGTCACTTGTGTTATTCGGAACGTTCCTATTGGCCTGGGCG 217461
Query 19105 AGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCA 19164
|||| || || |||||| | || ||| || |||||||| ||||| || || || |
Sbjct 217460 AGCCTTGTTTCGACAAGCTGGAAGCCAAACTTGCCCACGCGATGCTTAGTATTCCTGCAA 217401
Query 19165 CCAAGGGATTCGAGATTGGCAGCGGGTTTGC-GGGTGCG 19202
||||||| |||||||||||| || ||||| || ||||
Sbjct 217400 CCAAGGGCTTCGAGATTGGCTCTGGCTTTGCAGGCTGCG 217362
>seq856
Length=259896
Score = 109 bits (120), Expect = 7e-18
Identities = 93/115 (81%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|| || |||||||| || |||||| || ||||||| |||| |||||| | || ||||||
Sbjct 30501 GCTGCGAACTACCTTGATATCAAGGCTTTGCTCGACGTTGGATGCAAGACCGTCGCCAAC 30442
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300
||||| ||||| || || || ||||| ||||| |||||||||||||| || |||
Sbjct 30441 ATGATTAAGGGAAAATCTCCAGAGGAAATCCGAAAGACCTTTAACATTCAGAACG 30387
>seq2704
Length=633058
Score = 107 bits (118), Expect = 2e-17
Identities = 166/235 (71%), Gaps = 4/235 (2%)
Strand=Plus/Plus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| ||||| |||||| ||| || ||||| ||||| || ||||| ||
Sbjct 56147 GCCTTCTGGTAGTCGCCGACGCGCTTCTCAAAGAAGTTTGTCTTACCGGACAGCGAAATG 56206
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCC--GAGCGACG 868808
||||| | ||| ||||| | || || |||| ||| | || |||||||
Sbjct 56207 TTGTCCATGAAGTCGAATGGGTTCGTCGCATTATAGTACTTCTTATTACCAAGAGCGACA 56266
Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA 868868
|||| | ||||||||||||||||||||| ||||||||||| || |||||||||||
Sbjct 56267 --AGCAACCTGTCGGCGACAAACTCGATGTATTGGCACATGAGTTTGGAGTTCATGCCGA 56324
Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTC 868923
|| || || || | ||| ||| || ||||| ||||||||||| || ||
Sbjct 56325 GAAGGGCGCAAGGAAGGGCATCGGTCAAGAATTCTTTTTCGATCTCGACAGCTTC 56379
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6106915655803508
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |