Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_022060.1 Length=54314 Score E Sequences producing significant alignments: (Bits) Value seq559 336 8e-88 >seq559 Length=35318 Score = 336 bits (372), Expect = 8e-88 Identities = 592/851 (70%), Gaps = 26/851 (3%) Strand=Plus/Plus Query 40688 CAAGTTCAACGATCTAATCCAGAGCTTGCACCGGATTCAGCGGTTCGGCCAAACCCATCC 40747 |||||||||||| | |||||| | |||||| | ||||| ||| || | || || Sbjct 24654 CAAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGCTTCCAGCAGTCGCACCC 24713 Query 40748 CTGCACAGCCCATTTGATCCACTCCGAGACCGAGCGGGAAGTGGTGCGGGTCATCCGCGA 40807 | | | | | |||||| |||| || |||||||| || ||||| | | | | | Sbjct 24714 GGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGTGCGCGACCTGCAGGC 24773 Query 40808 GAAATGGGCACAACACCGAGAGTTGACATCAACGATGACCGACATCATTCATGAGTACGG 40867 ||| ||||| | ||| ||| ||| | ||| |||| ||||| | || || || Sbjct 24774 GAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGATCATCCGCGAATATGG 24833 Query 40868 ACTTGACCCCGAGG-CAATTTCGGAAGCGCTGCAACGCTCCATCGGATGTGAGCGCATCG 40926 || | | || | | |||| ||||| | ||||| ||||| ||||| | Sbjct 24834 CCTGCAGCATGACGTCGCCCTCGGC-GCGCTCAAGCGCTCGATCGGCGTCGAGCGGCAGG 24892 Query 40927 AAGCATCCGGTGAGGGATGGGTGTTCGTCAACAACGACTGCGTTCACGAAACCGAGAGAA 40986 | | | || || || ||| | | | ||||||||||||| | || | | | Sbjct 24893 AGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCGATGAGGCTGCCCGGC 24952 Query 40987 TGGCAGACGATTCGGTGGATCTGATTGTCACTAGCATTCCGTTCTCCAACCACTACGAGT 41046 ||| || | ||||| || ||||| ||||| ||| |||||| |||||||||||||| Sbjct 24953 TGGACGAAGGATCGGTCGACCTGATCGTCACCTCCATCCCGTTCAGCAACCACTACGAGT 25012 Query 41047 ACACGCCGAGCTACAACGACTTCGGCCACACCGACGACAACGCGCATTTCTGGGCGCAGA 41106 ||||||||||||||||||||||||||||||| ||||| ||| |||||||| ||||||| Sbjct 25013 ACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGCATTTCTTCGCGCAGA 25072 Query 41107 TGGACTACCTCACACCGCAGCTGCTGCGCATCCTCGCGCCGGGCCGTATCTACGCCTG-- 41164 |||| | || || ||| | ||||| || || ||||||||||| | |||||| Sbjct 25073 TGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCGCCGGGCCGGCT---CGCCTGCA 25129 Query 41165 -CCACGTCAAGGACCGCATCTTGTTCGGAAACGTCACCGGCGCCGGCGTGCCCACAGTGT 41223 |||||| |||||||| ||| ||||||| || ||||||| || ||||| || || Sbjct 25130 TCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGGGTGTGCCGACCGTCA 25189 Query 41224 CCCCGTTCCACGCCGAGGCGATCTTCCAC---GGCCGCAAACACGGCTTCGACTACCTCG 41280 |||||||||||| || ||| ||| ||| ||||||||| | | | | | Sbjct 25190 ATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC---CACGGCTTCCAGTTCATGG 25246 Query 41281 GCATGATCACCGTGGTCACCGATGTGGTGCGGGAAAACAACCAGACGTACCGGCTGGGCT 41340 ||||||||||||| |||||||| || ||||| || ||||||||||| ||||| ||| | Sbjct 25247 GCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCCTG---T 25303 Query 41341 GGT-CGGAGCAGTGC--AAAGACGCCACCAAGATGGGTGTCGGCTCCCCGGAATACATTC 41397 || | | | ||| || |||| ||| |||||||| |||| ||| |||||| | | Sbjct 25304 CGTACAGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCAGCCCCGAATACGTGC 25363 Query 41398 TGCTGTTCCACAAACCGCAAACAGACAGGTCGAAGGGATACGCCGACACACCCGTCACCA 41457 ||||| | | ||| ||||||| ||| | || || || |||||||| || ||||||| Sbjct 25364 TGCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCCGACACGCCGGTCACCA 25423 Query 41458 AATCCAAGGACGA---ATACACCCGTGCCCGATGGCAGGTGGACGCGCACGCGTTCTGGC 41514 | || | ||| |||| || || || |||||||| ||||| ||||| ||||||| Sbjct 25424 A--GGAACG-CGAGAGCTACAGCCTGGCGCGGTGGCAGGTCGACGCCCACGCCTTCTGGC 25480 Query 41515 GCTCGAGCGGC 41525 |||| |||||| Sbjct 25481 GCTCCAGCGGC 25491 Score = 255 bits (282), Expect = 2e-63 Identities = 317/430 (74%), Gaps = 8/430 (2%) Strand=Plus/Plus Query 39858 ATCTATCTCACCAACTATGAGAGTGTCCGCGACGGAAAGTTGGACCCGACACTGTTCACG 39917 |||| || ||||| || ||||| ||||||||||| ||| | ||| ||| ||||| Sbjct 22784 ATCTTCCTGACCAATTACGAGAGCGTCCGCGACGGCAAGGTCGACGTCACAACCTTCACC 22843 Query 39918 GCCGTCTCACTCGATGAGGCCAGCGTGTTGCGGTCTTTCGGGTCCAAGACCTACCAGTCG 39977 |||||| || || ||||| ||| | | || || |||||||| ||||||| |||| || Sbjct 22844 GCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGGGTCAAAGACCTTCCAGACG 22903 Query 39978 TTCCTAGAGCTGTTCGACGCGGTTCCCTACCGGTACGTCGCGACGGCCACGCCGTCACCG 40037 ||||| ||| ||||| ||||| || ||||| | |||||||| ||||| || || || Sbjct 22904 TTCCTGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCCTCGCCC 22963 Query 40038 AACCGGTACAAGGAGCTGATTCACTACGCGGGTTATCTCGGGGTGATGGACACCGGCGCG 40097 ||||| |||||||||||||| || ||||| |||| ||||| ||||||||||||||| Sbjct 22964 AACCGCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACCGGCCAA 23023 Query 40098 GCTCTCACTAGGTGGTTCCAGCGGGACAGCACCAAGGCGAATAACCTAACCCTCTACCCA 40157 || ||||| | | |||||||| ||||| |||||| | || ||||||||||| Sbjct 23024 GCGCTCACCCGCTTCTTCCAGCGCAACAGCGAGAAGGCGGGCGATCTCACCCTCTACCCG 23083 Query 40158 CATAAAGAGCGCGAATTCTGGCTTTGGCTCAATACCTGGGCCGCGTTCGTGCA-ATCCCC 40216 || || || | || |||||||| ||||| |||| |||||||| ||| |||| ||| Sbjct 23084 CACAAGGAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGGCCGTTTTCCTGCAGCGCCCG 23143 Query 40217 AGCTGACCTGGGTT---ATGACGCCACCGGCTATGACCTGCCGCCGTTGGATGTGCAGTG 40273 ||| ||||| || | ||||| |||||| || ||||| || | |||| || Sbjct 23144 AGC-GACCTCGGATTCAGTGACG---ACGGCTACGATCTGCCCGCGCTCACCGTGCGCTG 23199 Query 40274 GCATGAGGTC 40283 ||| |||||| Sbjct 23200 GCACGAGGTC 23209 Score = 127 bits (140), Expect = 7e-25 Identities = 198/277 (71%), Gaps = 22/277 (8%) Strand=Plus/Plus Query 41676 ACGTTCATGGCCATCGC-CCCGGGATCGTGGTCACC-TC---ACGTGTGGCACGACGTGA 41730 || |||||||| ||||| ||||| | | |||| || |||||||| ||||| | Sbjct 25787 ACCTTCATGGCGATCGCGCCCGGCAGC-----CACCATCCCGACGTGTGGGACGACATCG 25841 Query 41731 ACCGGATGATCACCTTGAACGGGGAGCAGAAACGCCGCAA---CGTCCAAATGCATGTGT 41787 |||||| || | ||||| |||||| |||||| || | | | ||| || | Sbjct 25842 TGCGGATGCAGACGCTCAACGGCGAGCAGGT---CCGCAAGGGCGCCGAGAAGCACGTCT 25898 Query 41788 GCCCCCTGCAGTTCGACATCGTTGACCGGCTGATCACTCGCTTCTCGAATCCTGGCGAGT 41847 ||||||| |||||||||||||| |||||||||||| || | ||| | | |||||| Sbjct 25899 GCCCCCTCCAGTTCGACATCGTCGACCGGCTGATCGAGCGATACTCTATGCGCGGCGAGC 25958 Query 41848 TGGTGTTCGACCCGTTCGGCGGGCTGGGCACCGTGCCGTTGCGGGCTCTGAAACT---CG 41904 |||||||||| |||||| |||| || |||||||||||| |||| || || || || Sbjct 25959 TGGTGTTCGATCCGTTCTGCGGCCTCGGCACCGTGCCGATGCGCGC---GATCCTTGCCG 26015 Query 41905 GTCGGCGCGGCCGTGGTGTCGAGCTGAATCCCGGCTA 41941 |||| |||||| || ||| || || |||| ||| Sbjct 26016 GTCGCCGCGGCGCCGGCAGCGAACTCAACCCCGACTA 26052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 173677581782688