Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq435 132 8e-25 seq2528 105 1e-16 seq856 95.1 2e-13 seq2704 89.7 8e-12 seq2158 86.0 1e-10 >seq435 Length=10274 Score = 132 bits (146), Expect = 8e-25 Identities = 219/311 (70%), Gaps = 5/311 (2%) Strand=Plus/Minus Query 2175076 TGCCGTCGGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCATTTCGCGGT 2175135 |||||||||||||||| || ||||||| |||| || ||| | || || | |||||||| Sbjct 4655 TGCCGTCGGTGCCGTTCTTGAACCCGATCGGCGCCGACAGGCCGGAGGCGAGTTCGCGGT 4596 Query 2175136 GCACCTGGCTCTCGGTGGTGCGCGCGCCCACGGCGCCCCACGCCACGAGGTCTGCCAAAT 2175195 |||||||||||||||||||||||||||| | || ||||||| | ||||| | | | Sbjct 4595 GCACCTGGCTCTCGGTGGTGCGCGCGCCGATCGCCCCCCACGAGATCAGGTCGCCGATGT 4536 Query 2175196 AGGGCGCCACCAAAGGGCTGAGAAACTCGACAGCC-ACGGGCTGGCCGACGTCGACGACC 2175254 | ||| | | | || |||||| | ||| | ||| |||| | | || | Sbjct 4535 ACTGCGGCGAGATCACGTCCAGGAACTCG-CTGCCGGCCGGCAGGCCCA-GCCG--GTTG 4480 Query 2175255 AGGTCGCGCAGCAGTCGACGCGATGTGGCGAGGCCGGCGGCCAGGCGGCACGACCCGTCG 2175314 | ||| |||||| | |||| || ||||| || | | |||| | | |||| Sbjct 4479 ATCTCGATCAGCAGCTGCCGCGCGATGCGCAGGCCCTCGTCGATGCGGAAGCTCTCGTCC 4420 Query 2175315 AGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAG 2175374 |||| |||||| || |||||||||||| || || |||||||||||||| |||| || Sbjct 4419 AGGTACGGGTCGTTGATCAGGCCCTTCCAGCCCACCGTCGTGCGCGGCTTCTCGAAGTAC 4360 Query 2175375 GCGCGCATGAC 2175385 | ||||| || Sbjct 4359 ACCCGCATCAC 4349 >seq2528 Length=594046 Score = 105 bits (116), Expect = 1e-16 Identities = 178/258 (69%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||| |||||||| || |||| ||| ||||| ||||||||||| | | ||||| || Sbjct 61213 CTGGTCAACATAGCGAGCAGTGTTGTTGAAGACACGGAGCATGGGGATGATTCCGTTAGA 61154 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||| || || || || | ||||| ||| | ||| || | ||| | || || Sbjct 61153 GGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTGGCACGGATACGGTGTACATTAAGACC 61094 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || || || || | |||||| || || || || |||| ||||| |||||||| || || Sbjct 61093 AATACCACCAGCTGTCTTGGAAATCAGTGCACAGGTTTTGAGCGTATCGTAGATACCTTC 61034 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 ||| || |||||||||| | || || || || | |||| || | | || || Sbjct 61033 GATACTATCCTCCTTCATGTCGATGAGGAAACAGGATGCCATTTGTGGCTGTGGAGTTCC 60974 Query 2073780 GGCATTGAAGAGCGTGGG 2073797 || ||||| || ||||| Sbjct 60973 CGCGTTGAAAAGAGTGGG 60956 >seq856 Length=259896 Score = 95.1 bits (104), Expect = 2e-13 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || || |||||||| || |||||| | | ||||| | || ||||||||||| |||||| Sbjct 30501 GCTGCGAACTACCTTGATATCAAGGCTTTGCTCGACGTTGGATGCAAGACCGTCGCCAAC 30442 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | || ||||| || || || ||||| ||||| |||||||||||||| || ||| Sbjct 30441 ATGATTAAGGGAAAATCTCCAGAGGAAATCCGAAAGACCTTTAACATTCAGAACG 30387 >seq2704 Length=633058 Score = 89.7 bits (98), Expect = 8e-12 Identities = 160/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 || ||||| |||||| ||| || ||||| ||||| || ||||| || ||||| Sbjct 56156 TAGTCGCCGACGCGCTTCTCAAAGAAGTTTGTCTTACCGGACAGCGAAATGTTGTCCATG 56215 Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCC--GAGCGACGCAAGCAGGC 794025 | ||| ||||| | || |||| ||||| || ||||||| ||||| | Sbjct 56216 AAGTCGAATGGGTTCGTCGCATTATAGTACTTCTTATTACCAAGAGCGAC--AAGCAACC 56273 Query 794026 GGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCA 794085 ||||||||| || || ||||| ||||||||||| || ||||||||||| || || Sbjct 56274 TGTCGGCGACAAACTCGATGTATTGGCACATGAGTTTGGAGTTCATGCCGAGAAGGGCGC 56333 Query 794086 CGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGAT 794137 || || | ||| | | || ||||| ||||||||||| || || |||| Sbjct 56334 AAGGAAGGGCATCGGTCAAGAATTCTTTTTCGATCTCGACAGCTTCTGTGAT 56385 >seq2158 Length=651031 Score = 86.0 bits (94), Expect = 1e-10 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 2411502 CGCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTG 2411561 ||||| | ||||||||| ||||| || |||||| || || ||||| ||| | ||||| Sbjct 197151 CGCAAGTGTAAAGATCTTCCGCTGATCCACCCCGCCGAATTGTGCGTCAACGCCTAGGTG 197092 Query 2411562 CTGCTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGG 2411598 || || || |||||||||||||| ||||||| |||| Sbjct 197091 CTCTTCATCCAGGGCCTGCATGAGTGGGTAGATGAGG 197055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915956635695836