Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq435 132 8e-25
seq2528 105 1e-16
seq856 95.1 2e-13
seq2704 89.7 8e-12
seq2158 86.0 1e-10
>seq435
Length=10274
Score = 132 bits (146), Expect = 8e-25
Identities = 219/311 (70%), Gaps = 5/311 (2%)
Strand=Plus/Minus
Query 2175076 TGCCGTCGGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCATTTCGCGGT 2175135
|||||||||||||||| || ||||||| |||| || ||| | || || | ||||||||
Sbjct 4655 TGCCGTCGGTGCCGTTCTTGAACCCGATCGGCGCCGACAGGCCGGAGGCGAGTTCGCGGT 4596
Query 2175136 GCACCTGGCTCTCGGTGGTGCGCGCGCCCACGGCGCCCCACGCCACGAGGTCTGCCAAAT 2175195
|||||||||||||||||||||||||||| | || ||||||| | ||||| | | |
Sbjct 4595 GCACCTGGCTCTCGGTGGTGCGCGCGCCGATCGCCCCCCACGAGATCAGGTCGCCGATGT 4536
Query 2175196 AGGGCGCCACCAAAGGGCTGAGAAACTCGACAGCC-ACGGGCTGGCCGACGTCGACGACC 2175254
| ||| | | | || |||||| | ||| | ||| |||| | | || |
Sbjct 4535 ACTGCGGCGAGATCACGTCCAGGAACTCG-CTGCCGGCCGGCAGGCCCA-GCCG--GTTG 4480
Query 2175255 AGGTCGCGCAGCAGTCGACGCGATGTGGCGAGGCCGGCGGCCAGGCGGCACGACCCGTCG 2175314
| ||| |||||| | |||| || ||||| || | | |||| | | ||||
Sbjct 4479 ATCTCGATCAGCAGCTGCCGCGCGATGCGCAGGCCCTCGTCGATGCGGAAGCTCTCGTCC 4420
Query 2175315 AGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAG 2175374
|||| |||||| || |||||||||||| || || |||||||||||||| |||| ||
Sbjct 4419 AGGTACGGGTCGTTGATCAGGCCCTTCCAGCCCACCGTCGTGCGCGGCTTCTCGAAGTAC 4360
Query 2175375 GCGCGCATGAC 2175385
| ||||| ||
Sbjct 4359 ACCCGCATCAC 4349
>seq2528
Length=594046
Score = 105 bits (116), Expect = 1e-16
Identities = 178/258 (69%), Gaps = 0/258 (0%)
Strand=Plus/Minus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
|||||| |||||||| || |||| ||| ||||| ||||||||||| | | ||||| ||
Sbjct 61213 CTGGTCAACATAGCGAGCAGTGTTGTTGAAGACACGGAGCATGGGGATGATTCCGTTAGA 61154
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
||| || || || || | ||||| ||| | ||| || | ||| | || ||
Sbjct 61153 GGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTGGCACGGATACGGTGTACATTAAGACC 61094
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
|| || || || | |||||| || || || || |||| ||||| |||||||| || ||
Sbjct 61093 AATACCACCAGCTGTCTTGGAAATCAGTGCACAGGTTTTGAGCGTATCGTAGATACCTTC 61034
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
||| || |||||||||| | || || || || | |||| || | | || ||
Sbjct 61033 GATACTATCCTCCTTCATGTCGATGAGGAAACAGGATGCCATTTGTGGCTGTGGAGTTCC 60974
Query 2073780 GGCATTGAAGAGCGTGGG 2073797
|| ||||| || |||||
Sbjct 60973 CGCGTTGAAAAGAGTGGG 60956
>seq856
Length=259896
Score = 95.1 bits (104), Expect = 2e-13
Identities = 90/115 (78%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
|| || |||||||| || |||||| | | ||||| | || ||||||||||| ||||||
Sbjct 30501 GCTGCGAACTACCTTGATATCAAGGCTTTGCTCGACGTTGGATGCAAGACCGTCGCCAAC 30442
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761
| || ||||| || || || ||||| ||||| |||||||||||||| || |||
Sbjct 30441 ATGATTAAGGGAAAATCTCCAGAGGAAATCCGAAAGACCTTTAACATTCAGAACG 30387
>seq2704
Length=633058
Score = 89.7 bits (98), Expect = 8e-12
Identities = 160/232 (69%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967
|| ||||| |||||| ||| || ||||| ||||| || ||||| || |||||
Sbjct 56156 TAGTCGCCGACGCGCTTCTCAAAGAAGTTTGTCTTACCGGACAGCGAAATGTTGTCCATG 56215
Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCC--GAGCGACGCAAGCAGGC 794025
| ||| ||||| | || |||| ||||| || ||||||| ||||| |
Sbjct 56216 AAGTCGAATGGGTTCGTCGCATTATAGTACTTCTTATTACCAAGAGCGAC--AAGCAACC 56273
Query 794026 GGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCA 794085
||||||||| || || ||||| ||||||||||| || ||||||||||| || ||
Sbjct 56274 TGTCGGCGACAAACTCGATGTATTGGCACATGAGTTTGGAGTTCATGCCGAGAAGGGCGC 56333
Query 794086 CGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGAT 794137
|| || | ||| | | || ||||| ||||||||||| || || ||||
Sbjct 56334 AAGGAAGGGCATCGGTCAAGAATTCTTTTTCGATCTCGACAGCTTCTGTGAT 56385
>seq2158
Length=651031
Score = 86.0 bits (94), Expect = 1e-10
Identities = 77/97 (79%), Gaps = 0/97 (0%)
Strand=Plus/Minus
Query 2411502 CGCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTG 2411561
||||| | ||||||||| ||||| || |||||| || || ||||| ||| | |||||
Sbjct 197151 CGCAAGTGTAAAGATCTTCCGCTGATCCACCCCGCCGAATTGTGCGTCAACGCCTAGGTG 197092
Query 2411562 CTGCTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGG 2411598
|| || || |||||||||||||| ||||||| ||||
Sbjct 197091 CTCTTCATCCAGGGCCTGCATGAGTGGGTAGATGAGG 197055
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7915956635695836
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |