Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq934 122 6e-23
seq1954 98.7 6e-16
>seq934
Length=187681
Score = 122 bits (134), Expect = 6e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||||| ||| ||||||||||||||| ||||| || || |||| ||||
Sbjct 9501 AGAACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCT 9442
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || || || || |||||||||| ||||||||||| | || | |||||||||||
Sbjct 9441 TCAAGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGAGGGATGCCCTCCTTGTCC 9382
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || || | |||| ||| ||| ||| || || | || |||||
Sbjct 9381 TGGATCTTGGTCTTAACATTGTCGATCGTATCACTGGACTCAACCTCGAGAGTGATGGTT 9322
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| |||||||| ||||| || || ||||||||
Sbjct 9321 TTGCCCGTGAGAGTCTTCACGAAAATCTGCAT 9290
Score = 122 bits (134), Expect = 6e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || || | ||| |||||| |||||||| ||||| || || |||| ||||
Sbjct 10025 AGGACGAGATGTAGGGTAGACTCCTTTTGAATGTTGTAGTCTGAGAGTGTGCGACCATCT 9966
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| |||||||| || || |||||||||||| | || | |||||||||||
Sbjct 9965 TCAAGCTGCTTGCCGGCGAAAATTAGACGTTGCTGGTCTGGTGGAATTCCCTCCTTGTCT 9906
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| |||||| ||| ||| | |||| || | || || |||| || || |||
Sbjct 9905 TGGATTTTTGTTTTAACGTTATCGATCGTGTCTGAAGATTCAACTTCAAGTGTGATTGTC 9846
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| || | |||||| || || ||||||||
Sbjct 9845 TTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 9814
Score = 105 bits (116), Expect = 4e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 34760 AACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGC 34819
|| |||| ||||| ||| | || || |||||||| ||||||||||| || || ||||
Sbjct 10259 AATCTCAAGACCAAGTGCAACGTACTTTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGG 10200
Query 34820 TCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCC 34879
|||| || |||||||| || || || || || ||||| |||||| | || | ||||||
Sbjct 10199 CCATCTTCAAGTTGCTTACCAGCAAAAATGAGACGTTGTTGGTCTGGTGGGATACCCTCC 10140
Query 34880 TTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTT 34939
|| || | |||||| || ||| | || | || || ||||| || | ||
Sbjct 10139 TTATCTTGGATTTTTGTCTTCACGTTGTCGATTGTGTCTGAGGATTCGACCTCTAACGTA 10080
Query 34940 ATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| ||||| || || | ||||| ||||| || |||||
Sbjct 10079 ATAGTCTTGCCGGTCAATGTCTTCACAAATATTTGCAT 10042
Score = 100 bits (110), Expect = 2e-16
Identities = 146/206 (71%), Gaps = 8/206 (4%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | |||| ||||||||||||||||| || || || | || | ||
Sbjct 9797 AGGACAAGGTGGAGGGTGGATTCCTTCTGAATGTTATAATCAGAGAGAGTCCGGCCGTCC 9738
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||||||||||||||||| || ||||| || | || | || ||||||||
Sbjct 9737 TCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCT 9678
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || ||| || | ||||||| || | ||| || |||| || ||
Sbjct 9677 TGGATCTTGGTTTTCAC----GTTATCGATGGTATCCGAAGACTCCACTTCAAGAGTGAT 9622
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAA 34967
||||||||| || || ||||| ||||
Sbjct 9621 GGTCTTTCCGGTAAGAGTCTTGACAA 9596
>seq1954
Length=527115
Score = 98.7 bits (108), Expect = 6e-16
Identities = 93/119 (78%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| |||| ||||||||| ||||| || ||||| ||| |||| | ||
Sbjct 282714 AGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCGTCC 282655
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || || || || |||||||| || ||||||||||| | || | |||||||||||
Sbjct 282654 TCGAGCTGTTTGCCAGCGAAGATGAGACGTTGCTGGTCAGGGGGGATGCCCTCCTTGTC 282596
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325681987406156
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |