Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq934 122 6e-23 seq1954 98.7 6e-16 >seq934 Length=187681 Score = 122 bits (134), Expect = 6e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| ||| ||||||||||||||| ||||| || || |||| |||| Sbjct 9501 AGAACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCT 9442 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || || || || |||||||||| ||||||||||| | || | ||||||||||| Sbjct 9441 TCAAGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGAGGGATGCCCTCCTTGTCC 9382 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || || | |||| ||| ||| ||| || || | || ||||| Sbjct 9381 TGGATCTTGGTCTTAACATTGTCGATCGTATCACTGGACTCAACCTCGAGAGTGATGGTT 9322 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || |||||||| ||||| || || |||||||| Sbjct 9321 TTGCCCGTGAGAGTCTTCACGAAAATCTGCAT 9290 Score = 122 bits (134), Expect = 6e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | ||| |||||| |||||||| ||||| || || |||| |||| Sbjct 10025 AGGACGAGATGTAGGGTAGACTCCTTTTGAATGTTGTAGTCTGAGAGTGTGCGACCATCT 9966 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| |||||||| || || |||||||||||| | || | ||||||||||| Sbjct 9965 TCAAGCTGCTTGCCGGCGAAAATTAGACGTTGCTGGTCTGGTGGAATTCCCTCCTTGTCT 9906 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | |||||| ||| ||| | |||| || | || || |||| || || ||| Sbjct 9905 TGGATTTTTGTTTTAACGTTATCGATCGTGTCTGAAGATTCAACTTCAAGTGTGATTGTC 9846 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || | |||||| || || |||||||| Sbjct 9845 TTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 9814 Score = 105 bits (116), Expect = 4e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 34760 AACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGC 34819 || |||| ||||| ||| | || || |||||||| ||||||||||| || || |||| Sbjct 10259 AATCTCAAGACCAAGTGCAACGTACTTTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGG 10200 Query 34820 TCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCC 34879 |||| || |||||||| || || || || || ||||| |||||| | || | |||||| Sbjct 10199 CCATCTTCAAGTTGCTTACCAGCAAAAATGAGACGTTGTTGGTCTGGTGGGATACCCTCC 10140 Query 34880 TTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTT 34939 || || | |||||| || ||| | || | || || ||||| || | || Sbjct 10139 TTATCTTGGATTTTTGTCTTCACGTTGTCGATTGTGTCTGAGGATTCGACCTCTAACGTA 10080 Query 34940 ATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| || || | ||||| ||||| || ||||| Sbjct 10079 ATAGTCTTGCCGGTCAATGTCTTCACAAATATTTGCAT 10042 Score = 100 bits (110), Expect = 2e-16 Identities = 146/206 (71%), Gaps = 8/206 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | |||| ||||||||||||||||| || || || | || | || Sbjct 9797 AGGACAAGGTGGAGGGTGGATTCCTTCTGAATGTTATAATCAGAGAGAGTCCGGCCGTCC 9738 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||||||||||||||||| || ||||| || | || | || |||||||| Sbjct 9737 TCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCT 9678 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||| || | ||||||| || | ||| || |||| || || Sbjct 9677 TGGATCTTGGTTTTCAC----GTTATCGATGGTATCCGAAGACTCCACTTCAAGAGTGAT 9622 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAA 34967 ||||||||| || || ||||| |||| Sbjct 9621 GGTCTTTCCGGTAAGAGTCTTGACAA 9596 >seq1954 Length=527115 Score = 98.7 bits (108), Expect = 6e-16 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| |||| ||||||||| ||||| || ||||| ||| |||| | || Sbjct 282714 AGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCGTCC 282655 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || || || || |||||||| || ||||||||||| | || | ||||||||||| Sbjct 282654 TCGAGCTGTTTGCCAGCGAAGATGAGACGTTGCTGGTCAGGGGGGATGCCCTCCTTGTC 282596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325681987406156