Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_023580.1 Length=57775 Score E Sequences producing significant alignments: (Bits) Value seq559 298 2e-76 >seq559 Length=35318 Score = 298 bits (330), Expect = 2e-76 Identities = 588/853 (69%), Gaps = 30/853 (4%) Strand=Plus/Plus Query 44977 CAAGTTCAACGATCTAATCCAGAGCTTGCACCGGATTCAGCGTTTCGGCCAAACCCATCC 45036 |||||||||||| | |||||| | |||||| | ||||| ||| || | || || Sbjct 24654 CAAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGCTTCCAGCAGTCGCACCC 24713 Query 45037 CTGCACAGCCCATTTGATCCACTCCGAGACCGAGCGGGAAGTGGTGCGGGTCATCCGCGA 45096 | | | | | |||||| |||| || |||||||| || ||||| | | | | | Sbjct 24714 GGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGTGCGCGACCTGCAGGC 24773 Query 45097 GAAATGGGCACAACACCGAGAGTTGACATCAACTATGACTGACATAATCCACGAATACGG 45156 ||| ||||| | ||| ||| ||| | ||| | || || |||| |||||| || Sbjct 24774 GAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGATCATCCGCGAATATGG 24833 Query 45157 GCTTGACCCCGAGG-CAATCTCGGAAGCTCTGCAACGGTCCATCGGATGCGAACGAATCG 45215 || | | || | | ||||| || || | || || ||||| ||| || | Sbjct 24834 CCTGCAGCATGACGTCGCCCTCGGC-GCGCTCAAGCGCTCGATCGGCGTCGAGCGGCAGG 24892 Query 45216 AAGCATCCGGCGAGGGCTGGCTGTTCGCCAACAACGACTGCGTACCCGAAACCGAGTCGA 45275 | | | ||||| |||||| | | || ||||||||||||| || | | | Sbjct 24893 AGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCGATGAGGCTGCCCGGC 24952 Query 45276 TGGACGACAACTCGGTGGACCTGATCGTCACCAGTATTCCGTTCTCCAATCACTACGAAT 45335 ||||||| ||||| ||||||||||||||| || |||||| ||| |||||||| | Sbjct 24953 TGGACGAAGGATCGGTCGACCTGATCGTCACCTCCATCCCGTTCAGCAACCACTACGAGT 25012 Query 45336 ACACCCCGTCCTACAACGACTTCGGTCACACCGACGACAACGCGCATTTCTGGGCGCAAA 45395 |||| ||| ||||||||||||||| ||||| ||||| ||| |||||||| ||||| | Sbjct 25013 ACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGCATTTCTTCGCGCAGA 25072 Query 45396 TGGACTACCTCACACCGCAACTGTTGCGCATCCTTGCGCCCGGGCGGATCTACGCCTG-- 45453 |||| | || || ||| | ||| | || || ||||| || ||| | |||||| Sbjct 25073 TGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCGCCGGGCCGGCT---CGCCTGCA 25129 Query 45454 -CCACGTCAAAGACCGCATCTTGTTCGGCAATGTCACCGGCGCTGGCGTGCCCACCGTGT 45512 |||||| || ||||| ||| ||||||| || ||||||| || ||||| ||||| Sbjct 25130 TCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGGGTGTGCCGACCGTCA 25189 Query 45513 CACCATTTCACGCCGAAGCG-ATCTTCCAC---GGCCGCAAACACGGCTTTGACTACCTC 45568 || || |||||| ||| | ||| ||| ||| |||||||| | | | | Sbjct 25190 ATCCGTTCCACGCC-AAGTGCATCGAGCACTATATGCGC---CACGGCTTCCAGTTCATG 25245 Query 45569 GGCATGATCACCGTTGTCACCGATGTGGTACGGGAAAACAACCAGACGTACCGGTTGGGT 45628 |||||||||||||| |||||||| || || || || ||||||||||| ||||| || Sbjct 25246 GGCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCCTG--- 25302 Query 45629 TGGTCCGAGC-AG-TGC--AAAGACGCCACCAAGATGGGCGTTGGCTCCCCGGAATACGT 45684 | || | ||| || ||| || |||| ||| ||||||||| ||| ||| |||||||| Sbjct 25303 TCGTAC-AGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCAGCCCCGAATACGT 25361 Query 45685 TCTGCTGTTCCATAAACCGCAGACAGACAGATCGAAGGGATACGCCGACACCCCCGTCAC 45744 |||||| | | || ||||| | ||| | || || || |||||||| || ||||| Sbjct 25362 GCTGCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCCGACACGCCGGTCAC 25421 Query 45745 CAAATCCAAGGACGA---CTACACCCGTGCCCGCTGGCAGGTGGACGCGCACGCGTTCTG 45801 ||| || | ||| ||||| || || || |||||||| ||||| ||||| ||||| Sbjct 25422 CAA--GGAACG-CGAGAGCTACAGCCTGGCGCGGTGGCAGGTCGACGCCCACGCCTTCTG 25478 Query 45802 GCGCTCGAGCGGC 45814 |||||| |||||| Sbjct 25479 GCGCTCCAGCGGC 25491 Score = 255 bits (282), Expect = 2e-63 Identities = 317/430 (74%), Gaps = 8/430 (2%) Strand=Plus/Plus Query 44147 ATCTATCTCACCAACTATGAGAGTGTCCGCGACGGAAAGTTGGACCCGACACTGTTCACG 44206 |||| || ||||| || ||||| ||||||||||| ||| | ||| ||| ||||| Sbjct 22784 ATCTTCCTGACCAATTACGAGAGCGTCCGCGACGGCAAGGTCGACGTCACAACCTTCACC 22843 Query 44207 GCCGTCTCACTCGATGAGGCCAGCGTGTTGCGGTCTTTCGGGTCCAAGACCTACCAGTCG 44266 |||||| || || ||||| ||| | | || || |||||||| ||||||| |||| || Sbjct 22844 GCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGGGTCAAAGACCTTCCAGACG 22903 Query 44267 TTCCTAGAGCTGTTCGACGCGGTTCCCTACCGGTACGTCGCGACGGCCACGCCGTCACCG 44326 ||||| ||| ||||| ||||| || ||||| | |||||||| ||||| || || || Sbjct 22904 TTCCTGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCCTCGCCC 22963 Query 44327 AACCGGTACAAGGAGCTGATTCACTACGCGGGTTATCTCGGGGTGATGGACACCGGCGCG 44386 ||||| |||||||||||||| || ||||| |||| ||||| ||||||||||||||| Sbjct 22964 AACCGCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACCGGCCAA 23023 Query 44387 GCTCTCACTAGGTGGTTCCAGCGGGACAGCACCAAGGCGAATAACCTAACCCTCTACCCA 44446 || ||||| | | |||||||| ||||| |||||| | || ||||||||||| Sbjct 23024 GCGCTCACCCGCTTCTTCCAGCGCAACAGCGAGAAGGCGGGCGATCTCACCCTCTACCCG 23083 Query 44447 CATAAAGAGCGCGAATTCTGGCTTTGGCTCAATACCTGGGCCGCGTTCGTGCA-ATCCCC 44505 || || || | || |||||||| ||||| |||| |||||||| ||| |||| ||| Sbjct 23084 CACAAGGAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGGCCGTTTTCCTGCAGCGCCCG 23143 Query 44506 AGCTGACCTGGGTT---ATGACGCCACCGGCTATGACCTGCCGCCGTTGGATGTGCAGTG 44562 ||| ||||| || | ||||| |||||| || ||||| || | |||| || Sbjct 23144 AGC-GACCTCGGATTCAGTGACG---ACGGCTACGATCTGCCCGCGCTCACCGTGCGCTG 23199 Query 44563 GCATGAGGTC 44572 ||| |||||| Sbjct 23200 GCACGAGGTC 23209 Score = 134 bits (148), Expect = 5e-27 Identities = 212/298 (71%), Gaps = 22/298 (7%) Strand=Plus/Plus Query 45944 GGTCGCGGCGCCCTGCCTGCCACGTTCATGGCCATCGC-CCCGGGATCGTGGTCACC-TC 46001 |||| ||| |||||| ||| |||||||| ||||| ||||| | | |||| || Sbjct 25766 GGTCTGGGCAGCCTGCCGCGCACCTTCATGGCGATCGCGCCCGGCAGC-----CACCATC 25820 Query 46002 ---ACGTGTGGCACGACGTGAACCGGATGATCACCTTGAACGGGGAGCAGAAACGCCGCA 46058 |||||||| ||||| | |||||| || | ||||| |||||| ||||| Sbjct 25821 CCGACGTGTGGGACGACATCGTGCGGATGCAGACGCTCAACGGCGAGCAGGT---CCGCA 25877 Query 46059 A---CGTTCAAATGCACGTGTGCCCCCTGCAGTTCGACATCGTTGACCGGCTGATCACTC 46115 | || | | |||||| |||||||| |||||||||||||| |||||||||||| | Sbjct 25878 AGGGCGCCGAGAAGCACGTCTGCCCCCTCCAGTTCGACATCGTCGACCGGCTGATCGAGC 25937 Query 46116 GCTTCTCGAATCCTGGCGAGTTGGTGTTCGACCCGTTCGGCGGGCTGGGCACCGTGCCGT 46175 | | ||| | | |||||| |||||||||| |||||| |||| || |||||||||||| Sbjct 25938 GATACTCTATGCGCGGCGAGCTGGTGTTCGATCCGTTCTGCGGCCTCGGCACCGTGCCGA 25997 Query 46176 TGCGGGCTCTGAAACT---CGGTCGGCGCGGCCGTGGTGTCGAGCTGAATCCCGGCTA 46230 |||| || || || |||||| |||||| || ||| || || |||| ||| Sbjct 25998 TGCGCGC---GATCCTTGCCGGTCGCCGCGGCGCCGGCAGCGAACTCAACCCCGACTA 26052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 184752423527656